Stereospecific assignments of glycine in proteins by stereospecific deuteration and 15N labeling

1994 ◽  
Vol 4 (3) ◽  
pp. 335-340 ◽  
Author(s):  
Robert W. Curley ◽  
Michael J. Panigot ◽  
Andrew P. Hansen ◽  
Stephen W. Fesik

Chemosphere ◽  
2021 ◽  
Vol 270 ◽  
pp. 129462
Author(s):  
Fan Wang ◽  
Chuansheng Wang ◽  
Yanyan Zheng ◽  
Xiaoyue Li ◽  
Huapeng Qin ◽  
...  
Keyword(s):  


2017 ◽  
Vol 94 (3) ◽  
pp. 485-490 ◽  
Author(s):  
Lomme J. Deleu ◽  
Edith Wilderjans ◽  
Ingrid Van Haesendonck ◽  
Kristof Brijs ◽  
Jan A. Delcour


Metabolites ◽  
2019 ◽  
Vol 9 (6) ◽  
pp. 114 ◽  
Author(s):  
Kristen Clermont ◽  
Yaxin Wang ◽  
Siming Liu ◽  
Zhenzhen Yang ◽  
Claude dePamphilis ◽  
...  

Parasitic weeds of the family Orobanchaceae attach to the roots of host plants via haustoria capable of drawing nutrients from host vascular tissue. The connection of the haustorium to the host marks a shift in parasite metabolism from autotrophy to at least partial heterotrophy, depending on the level of parasite dependence. Species within the family Orobanchaceae span the spectrum of host nutrient dependency, yet the diversity of parasitic plant metabolism remains poorly understood, particularly during the key metabolic shift surrounding haustorial attachment. Comparative profiling of major metabolites in the obligate holoparasite Phelipanche aegyptiaca and the facultative hemiparasite Triphysaria versicolor before and after attachment to the hosts revealed several metabolic shifts implicating remodeling of energy and amino acid metabolism. After attachment, both parasites showed metabolite profiles that were different from their respective hosts. In P. aegyptiaca, prominent changes in metabolite profiles were also associated with transitioning between different tissue types before and after attachment, with aspartate levels increasing significantly after the attachment. Based on the results from 15N labeling experiments, asparagine and/or aspartate-rich proteins were enriched in host-derived nitrogen in T. versicolor. These results point to the importance of aspartate and/or asparagine in the early stages of attachment in these plant parasites and provide a rationale for targeting aspartate-family amino acid biosynthesis for disrupting the growth of parasitic weeds.





1992 ◽  
Vol 283 (2) ◽  
pp. 413-420 ◽  
Author(s):  
L Y Lian ◽  
W C Chan ◽  
S D Morley ◽  
G C Roberts ◽  
B W Bycroft ◽  
...  

The conformations of nisin and two major degradation products, nisin-(1-32)-peptide (nisin1-32) and des-delta Ala5-nisin1-32 (where delta Ala is alpha beta-didehydroalanine), in aqueous solution have been determined from n.m.r. data. Sequential assignments of the peptides using correlation spectroscopy (‘COSY‘), homonuclear Hartmann-Hahn spectroscopy (‘HOHAHA’), nuclear Overhauser enhancement spectroscopy (NOESY), relayed NOESY and rotating-frame nuclear Overhauser spectroscopy (ROESY) experiments are presented, including stereospecific assignments of beta-methylene protons of the lanthionine residues. ROESY experiments are also used to detect flexible regions in the polypeptide chain. A dynamic-stimulated-annealing approach is used for structural determination. It can be concluded that all these peptides are flexible in aqueous solution, with no experimental evidence of preferred overall conformations; the only defined conformational features are imposed by the presence of the lanthionine residues. Low-temperature studies also reveal that des-delta Ala5-nisin1-32 adopts conformations similar to those when the ring is intact, suggesting that the loss of activity of this degradation product is due to the absence of the delta Ala5 residue rather than to the conformational consequences of ring-opening.





RSC Advances ◽  
2019 ◽  
Vol 9 (46) ◽  
pp. 26856-26879 ◽  
Author(s):  
Sergey L. Deev ◽  
Igor A. Khalymbadzha ◽  
Tatyana S. Shestakova ◽  
Valery N. Charushin ◽  
Oleg N. Chupakhin

This review provides a generalization of effective examples of 15N labeling followed by an analysis of JCN and JHN couplings in solution as a tool to study the structural aspects and pathways of chemical transformations in nitrogen heterocycles.



Molecules ◽  
2018 ◽  
Vol 23 (12) ◽  
pp. 3312 ◽  
Author(s):  
Yang Yang ◽  
Xianxu Chu ◽  
Yan Lu ◽  
Manabu Abe ◽  
Xiaoqing Zeng

Chloro- and dichloro-methylsulfonyl nitrenes, CH2ClS(O)2N and CHCl2S(O)2N, have been generated from UV laser photolysis (193 and 266 nm) of the corresponding sulfonyl azides CH2ClS(O)2N3 and CHCl2S(O)2N3, respectively. Both nitrenes have been characterized with matrix-isolation IR and EPR spectroscopy in solid N2 (10 K) and glassy toluene (5 K) matrices. Triplet ground-state multiplicity of CH2ClS(O)2N (|D/hc| = 1.57 cm−1 and |E/hc| = 0.0026 cm−1) and CHCl2S(O)2N (|D/hc| = 1.56 cm−1 and |E/hc| = 0.0042 cm−1) has been confirmed. In addition, dichloromethylnitrene CHCl2N (|D/hc| = 1.57 cm−1 and |E/hc| = 0 cm−1), formed from SO2-elimination in CHCl2S(O)2N, has also been identified for the first time. Upon UV light irradiation (365 nm), the two sulfonyl nitrenes R–S(O)2N (R = CH2Cl and CHCl2) undergo concomitant 1,2-R shift to N-sulfonlyamines R–NSO2 and 1,2-oxygen shift to S-nitroso compounds R–S(O)NO, respectively. The identification of these new species with IR spectroscopy is supported by 15N labeling experiments and quantum chemical calculations at the B3LYP/6-311++G(3df,3pd) level. In contrast, the thermally-generated sulfonyl nitrenes CH2ClS(O)2N (600 K) and CHCl2S(O)2N (700 K) dissociate completely in the gas phase, and in both cases, HCN, SO2, HCl, HNSO, and CO form. Additionally, ClCN, OCCl2, HNSO2, •NSO2, and the atmospherically relevant radical •CHCl2 are also identified among the fragmentation products of CHCl2S(O)2N. The underlying mechanisms for the rearrangement and decomposition of CH2ClS(O)2N and CHCl2S(O)2N are discussed based on the experimentally-observed products and the calculated potential energy profile.



Agronomy ◽  
2020 ◽  
Vol 10 (3) ◽  
pp. 360 ◽  
Author(s):  
Zeqiang Shao ◽  
Xinyu Wang ◽  
Qiang Gao ◽  
Hualiang Zhang ◽  
Hailing Yu ◽  
...  

Belowground nitrogen (N) transfer from legumes to non-legumes provides an important N source for crop yield and N utilization. However, whether root contact facilitates N transfer and the extent to which N transfer contributes to crop productivity and N utilization have not been clarified. In our study, two-year rain shelter experiments were conducted to quantify the effect of root contact on N transfer in a maize/alfalfa intercropping system. N transfer occurred mainly one direction from alfalfa to maize during the growth period. Following the N0 treatment, the amount of N transfer from alfalfa to maize was 204.56 mg pot−1 with no root barrier and 165.13 mg pot−1 with a nylon net barrier, accounting for 4.72% and 4.48% of the total N accumulated in maize, respectively. Following the N1 treatment, the amount of N transfer from alfalfa to maize was 197.70 mg pot−1 with no root barrier and 139.04 mg pot−1 with a nylon net barrier, accounting for 3.64% and 2.36% of the total N accumulated in the maize, respectively. Furthermore, the amount of N transfer without no root barrier was 1.24–1.42 times higher than that with a nylon net barrier regardless of the level of N addition. Our results highlight the importance and the relevance of root contact for the enhancement of N transfer in a maize/alfalfa intercropping system.



2012 ◽  
Vol 70 ◽  
pp. 23-31 ◽  
Author(s):  
Fanny Leroy ◽  
Pascal Riera ◽  
Christian Jeanthon ◽  
Frédérique Edmond ◽  
Cédric Leroux ◽  
...  


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