Mechanism that allows manno-oligosaccharide to promote cellulose degradation by the bacterial community and the composting of cow manure with straw

Author(s):  
Yuhua Zhang ◽  
Manli Duan ◽  
Beibei Zhou ◽  
Quanjiu Wang ◽  
Zhenshi Zhang ◽  
...  
2021 ◽  
Author(s):  
Yuhua Zhang ◽  
Manli Duan ◽  
Beibei Zhou ◽  
Quanjiu Wang ◽  
Zhenshi Zhang ◽  
...  

Abstract New sugar source, manno-oligosaccharide, can regulate the structure of microbes. The effects of adding manno-oligosaccharide at four different levels (0, 0.1%, 0.5%, and 1% w/w compost) to cow manure–straw compost on the composting process, degradation of lignocellulose, and bacterial community in this study was investigated. The results showed that adding 0.5% manno-oligosaccharide had the greatest effects on accelerating the composting process, reducing the toxicity, and improving the stability of the product. After composting for 25 days, 0.5% oligosaccharide treatment can decrease the hemicellulose, cellulose, and lignin contents to 2.25%, 11.25%, and 7.07% respectively, compared with CK. Manno-oligosaccharide affected the distribution of the bacterial community, inhibited pathogenic bacteria, and improved the abundance of functional genes. Finally, adding 0.5% manno-oligosaccharide mainly affected the degradation of lignocellulose by enhancing the C/N value and the abundances of Streptomyces and the secretion system during composting was demonstrated by redundancy analysis.


2020 ◽  
Vol 20 (1) ◽  
Author(s):  
Shuning Zhang ◽  
Litao Sun ◽  
Yu Wang ◽  
Kai Fan ◽  
Qingshan Xu ◽  
...  

2004 ◽  
Vol 54 (6) ◽  
pp. 2043-2047 ◽  
Author(s):  
Souichiro Kato ◽  
Shin Haruta ◽  
Zong Jun Cui ◽  
Masaharu Ishii ◽  
Akira Yokota ◽  
...  

A novel anaerobic, thermophilic and cellulolytic bacterium (strain CSK1T) was isolated from a cellulose-degrading bacterial community. On the basis of 16S rRNA gene sequence similarity, strain CSK1T was mapped to cluster III of the genus Clostridium. Strain CSK1T is closely related to Clostridium thermocellum (96·2 %) and Clostridium aldrichii (95·1 %). Strain CSK1T is a non-motile, spore-forming, straight or slightly curved rod. The optimum temperature and initial pH for its growth and cellulose degradation are 50–55 °C and pH 7·5. Strain CSK1T grew under a gas phase containing up to 4 % O2. Phylogenetic and phenotypic analyses support the differentiation of strain CSK1T from its closest relatives. Strain CSK1T therefore represents a novel species, for which the name Clostridium straminisolvens sp. nov. is proposed, with CSK1T (=DSM 16021T=IAM 15070T) as the type strain.


2018 ◽  
Vol 115 (51) ◽  
pp. E11996-E12004 ◽  
Author(s):  
Gaku Tokuda ◽  
Aram Mikaelyan ◽  
Chiho Fukui ◽  
Yu Matsuura ◽  
Hirofumi Watanabe ◽  
...  

Symbiotic digestion of lignocellulose in wood-feeding higher termites (family Termitidae) is a two-step process that involves endogenous host cellulases secreted in the midgut and a dense bacterial community in the hindgut compartment. The genomes of the bacterial gut microbiota encode diverse cellulolytic and hemicellulolytic enzymes, but the contributions of host and bacterial symbionts to lignocellulose degradation remain ambiguous. Our previous studies of Nasutitermes spp. documented that the wood fibers in the hindgut paunch are consistently colonized not only by uncultured members of Fibrobacteres, which have been implicated in cellulose degradation, but also by unique lineages of Spirochaetes. Here, we demonstrate that the degradation of xylan, the major component of hemicellulose, is restricted to the hindgut compartment, where it is preferentially hydrolyzed over cellulose. Metatranscriptomic analysis documented that the majority of glycoside hydrolase (GH) transcripts expressed by the fiber-associated bacterial community belong to family GH11, which consists exclusively of xylanases. The substrate specificity was further confirmed by heterologous expression of the gene encoding the predominant homolog. Although the most abundant transcripts of GH11 in Nasutitermes takasagoensis were phylogenetically placed among their homologs of Firmicutes, immunofluorescence microscopy, compositional binning of metagenomics contigs, and the genomic context of the homologs indicated that they are encoded by Spirochaetes and were most likely obtained by horizontal gene transfer among the intestinal microbiota. The major role of spirochetes in xylan degradation is unprecedented and assigns the fiber-associated Treponema clades in the hindgut of wood-feeding higher termites a prominent part in the breakdown of hemicelluloses.


2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Amrita Chakraborty ◽  
Muhammad Zubair Ashraf ◽  
Roman Modlinger ◽  
Jiří Synek ◽  
Fredrik Schlyter ◽  
...  

Abstract Bark beetles often serve as forest damaging agents, causing landscape-level mortality. Understanding the biology and ecology of beetles are important for both, gathering knowledge about important forest insects and forest protection. Knowledge about the bark beetle gut-associated bacteria is one of the crucial yet surprisingly neglected areas of research with European tree-killing bark beetles. Hence, in this study, we survey the gut bacteriome from five Ips and one non-Ips bark beetles from Scolytinae. Results reveal 69 core bacterial genera among five Ips beetles that may perform conserved functions within the bark beetle holobiont. The most abundant bacterial genera from different bark beetle gut include Erwinia, Sodalis, Serratia, Tyzzerella, Raoultella, Rahnella, Wolbachia, Spiroplasma, Vibrio, and Pseudoxanthomonas. Notable differences in gut-associated bacterial community richness and diversity among the beetle species are observed. Furthermore, the impact of sampling location on the overall bark beetle gut bacterial community assemblage is also documented, which warrants further investigations. Nevertheless, our data expanded the current knowledge about core gut bacterial communities in Ips bark beetles and their putative function such as cellulose degradation, nitrogen fixation, detoxification of defensive plant compounds, and inhibition of pathogens, which could serve as a basis for further metatranscriptomics and metaproteomics investigations.


2019 ◽  
Vol 280 ◽  
pp. 79-87 ◽  
Author(s):  
Yumin Duan ◽  
Sanjeev Kumar Awasthi ◽  
Tao Liu ◽  
Shivpal Verma ◽  
Quan Wang ◽  
...  

2011 ◽  
Vol 111 (6) ◽  
pp. 1416-1425 ◽  
Author(s):  
D. Hanajima ◽  
Y. Fukumoto ◽  
T. Yasuda ◽  
K. Suzuki ◽  
K. Maeda ◽  
...  

Sign in / Sign up

Export Citation Format

Share Document