A water shortage risk predicting model through estimating mutual information values between risk and risk factors

2021 ◽  
Vol 80 (23) ◽  
Author(s):  
Longxia Qian ◽  
Zhengxin Wang ◽  
Mei Hong ◽  
Hongrui Wang ◽  
Yangjun Wang
1997 ◽  
Vol 36 (04/05) ◽  
pp. 257-260 ◽  
Author(s):  
H. Saitoh ◽  
T. Yokoshima ◽  
H. Kishida ◽  
H. Hayakawa ◽  
R. J. Cohen ◽  
...  

Abstract:The frequency of ventricular premature beats (VPBs) has been related to the risk of mortality. However, little is known about the temporal pattern of occurrence of VPBs and its relationship to autonomic activity. Hence, we applied a general correlation measure, mutual information, to quantify how VPBs are generated over time. We also used mutual information to determine the correlation between VPB production and heart rate in order to evaluate effects of autonomic activity on VPB production. We examined twenty subjects with more than 3000 VPBs/day and simulated ran-( dom time series of VPB occurrence. We found that mutual information values could be used to characterize quantitatively the temporal patterns of VPB generation. Our data suggest that VPB production is not random and VPBs generated with a higher value of mutual information may be more greatly affected by autonomic activity.


2020 ◽  
Vol 4 (3) ◽  
pp. 678-697
Author(s):  
Samantha P. Sherrill ◽  
Nicholas M. Timme ◽  
John M. Beggs ◽  
Ehren L. Newman

Neural information processing is widely understood to depend on correlations in neuronal activity. However, whether correlation is favorable or not is contentious. Here, we sought to determine how correlated activity and information processing are related in cortical circuits. Using recordings of hundreds of spiking neurons in organotypic cultures of mouse neocortex, we asked whether mutual information between neurons that feed into a common third neuron increased synergistic information processing by the receiving neuron. We found that mutual information and synergistic processing were positively related at synaptic timescales (0.05–14 ms), where mutual information values were low. This effect was mediated by the increase in information transmission—of which synergistic processing is a component—that resulted as mutual information grew. However, at extrasynaptic windows (up to 3,000 ms), where mutual information values were high, the relationship between mutual information and synergistic processing became negative. In this regime, greater mutual information resulted in a disproportionate increase in redundancy relative to information transmission. These results indicate that the emergence of synergistic processing from correlated activity differs according to timescale and correlation regime. In a low-correlation regime, synergistic processing increases with greater correlation, and in a high-correlation regime, synergistic processing decreases with greater correlation.


2019 ◽  
Author(s):  
Samantha P. Sherrill ◽  
Nicholas M. Timme ◽  
John M. Beggs ◽  
Ehren L. Newman

ABSTRACTNeural information processing is widely understood to depend on correlations in neuronal activity. However, whether correlation is favorable or not is contentious. Here, we sought to determine how correlated activity and information processing are related in cortical circuits. Using recordings of hundreds of spiking neurons in organotypic cultures of mouse neocortex, we asked whether mutual information between neurons that feed into a common third neuron increased synergistic information processing by the receiving neuron. We found that mutual information and synergistic processing were positively related at synaptic timescales (0.05-14 ms), where mutual information values were low. This effect was mediated by the increase in information transmission—of which synergistic processing is a component—that resulted as mutual information grew. However, at extrasynaptic windows (up to 3000 ms), where mutual information values were high, the relationship between mutual information and synergistic processing became negative. In this regime, greater mutual information resulted in a disproportionate increase in redundancy relative to information transmission. These results indicate that the emergence of synergistic processing from correlated activity differs according to timescale and correlation regime. In a low-correlation regime, synergistic processing increases with greater correlation, and in a high correlation regime, synergistic processing decreases with greater correlation.AUTHOR SUMMARYIn the present work, we address the question of whether correlated activity in functional networks of cortical circuits supports neural computation. To do so, we combined network analysis with information theoretic tools to analyze the spiking activity of hundreds of neurons recorded from organotypic cultures of mouse somatosensory cortex. We found that, at timescales most relevant to direct neuronal communication, neurons with more correlated activity predicted greater computation, suggesting that correlated activity does support computation in cortical circuits. Importantly, this result reversed at timescales less relevant to direct neuronal communication, where even greater correlated activity predicted decreased computation. Thus, the relationship between correlated activity and computation depends on the timescale and the degree of correlation in neuronal interactions.


2021 ◽  
Author(s):  
Shiwei Xiao ◽  
Yigang Zuo ◽  
Yinglong Huang ◽  
Yanan Li ◽  
Dongbo Yuan ◽  
...  

Abstract BackgroundBladder cancer (BC) is a serious urinary tract malignancy with high incidences and deaths. Here, we aim to explore the OS-related lncRNAs and mRNAs, and constructed a reliable predicting model for accurately predict BC prognosis. Methods3 matched BC tumor samples and adjacent normal samples were processed by whole transcriptome sequencing. Differentially expressed lncRNAs and mRNAs (DE-lncRNAs and DE-mRNAs) were identified with the thresholds |log2 (FC) |>2 and p value <0.05 using DEGseq2 R package. Meantime, 408 BC samples and 19 normal samples were downloaded from TCGA database. And DE-lncRNAs and DE-mRNAs were screened with thresholds |log2(FC) |>0.5 and p value<0.05. The DE-lncRNAs and DE-mRNAs were overlapped between RNA-sequencing data and TCGA data. Then, overall survival (OS)-related DE-lncRNAs and DE-mRNAs were screened and a prognostic gene signature and risk model were constructed using Univariate Cox and stepwise multiple regression analysis. Risk score was calculated based on prognostic gene signature. The independent risk factors were identified with incorporation into clinical risk factors using Univariate Cox and stepwise multiple regression analysis. A predicting model was constructed based on independent factors, and calibrated using Time-dependent ROC curves. Finally, the differentially expressed genes (DEGs) between high-risk and low-risk groups were identified with thresholds |log2(FC) |>0.5 and p value<0.05. And the biofunction was determined by Gene Set Enrichment Analysis (GSEA). ResultsA total 2210 DE-lncTNAs and 2334 DE-mRNAs were identified based on whole transcriptome sequencing. And a total 3724 DE-lncRNAs and 2689 DE-mRNAs were identified based on TCGA database. Then, 137 DE-lncRNAs and 278 DE-mRNAs were screened by overlapping RNA sequencing data and TCGA data. A total 13 gene signature were identified to be closely related with OS in BC. Moreover, these 13-OS-related gene signature were identified as independent risk factors with clinical risk factors. Then, a nomogram was constructed and confirmed as the calibration and accuracy predicating model for OS in BC. Finally, a total 739 DEGs were identified between high-risk and low-risk groups, most of DEGs enriched in immune-related pathways. And an OS-related ceRNA network was selected based on 13-OS-related signature. ConclusionOur finding provided novel OS-related prognostic signature and reliable predicting model for BC patients, which might facilitate individualized treatment and prognostic evaluation.


2019 ◽  
Vol 133 (22) ◽  
pp. 2283-2299
Author(s):  
Apabrita Ayan Das ◽  
Devasmita Chakravarty ◽  
Debmalya Bhunia ◽  
Surajit Ghosh ◽  
Prakash C. Mandal ◽  
...  

Abstract The role of inflammation in all phases of atherosclerotic process is well established and soluble TREM-like transcript 1 (sTLT1) is reported to be associated with chronic inflammation. Yet, no information is available about the involvement of sTLT1 in atherosclerotic cardiovascular disease. Present study was undertaken to determine the pathophysiological significance of sTLT1 in atherosclerosis by employing an observational study on human subjects (n=117) followed by experiments in human macrophages and atherosclerotic apolipoprotein E (apoE)−/− mice. Plasma level of sTLT1 was found to be significantly (P<0.05) higher in clinical (2342 ± 184 pg/ml) and subclinical cases (1773 ± 118 pg/ml) than healthy controls (461 ± 57 pg/ml). Moreover, statistical analyses further indicated that sTLT1 was not only associated with common risk factors for Coronary Artery Disease (CAD) in both clinical and subclinical groups but also strongly correlated with disease severity. Ex vivo studies on macrophages showed that sTLT1 interacts with Fcɣ receptor I (FcɣRI) to activate spleen tyrosine kinase (SYK)-mediated downstream MAP kinase signalling cascade to activate nuclear factor-κ B (NF-kB). Activation of NF-kB induces secretion of tumour necrosis factor-α (TNF-α) from macrophage cells that plays pivotal role in governing the persistence of chronic inflammation. Atherosclerotic apoE−/− mice also showed high levels of sTLT1 and TNF-α in nearly occluded aortic stage indicating the contribution of sTLT1 in inflammation. Our results clearly demonstrate that sTLT1 is clinically related to the risk factors of CAD. We also showed that binding of sTLT1 with macrophage membrane receptor, FcɣR1 initiates inflammatory signals in macrophages suggesting its critical role in thrombus development and atherosclerosis.


2011 ◽  
Vol 21 (2) ◽  
pp. 59-62
Author(s):  
Joseph Donaher ◽  
Christina Deery ◽  
Sarah Vogel

Healthcare professionals require a thorough understanding of stuttering since they frequently play an important role in the identification and differential diagnosis of stuttering for preschool children. This paper introduces The Preschool Stuttering Screen for Healthcare Professionals (PSSHP) which highlights risk factors identified in the literature as being associated with persistent stuttering. By integrating the results of the checklist with a child’s developmental profile, healthcare professionals can make better-informed, evidence-based decisions for their patients.


2010 ◽  
Vol 20 (3) ◽  
pp. 76-83 ◽  
Author(s):  
Joseph Donaher ◽  
Tom Gurrister ◽  
Irving Wollman ◽  
Tim Mackesey ◽  
Michelle L. Burnett

Parents of children who stutter and adults who stutter frequently ask speech-language pathologists to predict whether or not therapy will work. Even though research has explored risk-factors related to persistent stuttering, there remains no way to determine how an individual will react to a specific therapy program. This paper presents various clinicians’answers to the question, “What do you tell parents or adults who stutter when they ask about cure rates, outcomes, and therapy efficacy?”


Sign in / Sign up

Export Citation Format

Share Document