scholarly journals Single-Molecule and Molecular Dynamics Study of the Dimerization of Myosin VI Medial Tail Domain

2010 ◽  
Vol 98 (3) ◽  
pp. 724a
Author(s):  
HyeongJun Kim ◽  
Jen Hsin ◽  
Yanxin Liu ◽  
Monalisa Mukherjea ◽  
Daniel Safer ◽  
...  
2010 ◽  
Vol 98 (3) ◽  
pp. 724a
Author(s):  
Yanxin Liu ◽  
Jen Hsin ◽  
HyeongJun Kim ◽  
Anne Houdusse ◽  
H. Lee Sweeney ◽  
...  

2018 ◽  
Vol 32 (18) ◽  
pp. 1840001 ◽  
Author(s):  
Ming Li ◽  
Zhong-Can Ou-Yang ◽  
Yao-Gen Shu

Kinesin is a two-headed linear motor for intracellular transport. It can walk a long distance in a hand-over-hand manner along the track before detaching (i.e., high processivity), and it consumes one ATP molecule for each step (i.e., tight mechanochemical coupling). The mechanisms of the coordination of its two heads and the mechanochemical coupling are the central issues of numerous researches. A few advances have been made in recent decades, thanks to the development of single-molecule technologies and molecular dynamics simulations. In this paper, we review some progress of the studies on the kinematics, energetics, coordination mechanism, mechanochemical mechanism of kinesin. We also present a personal perspective on the future studies of kinesin.


2001 ◽  
Vol 41 (supplement) ◽  
pp. S193
Author(s):  
Tomonobu WATANABE ◽  
Atsuko H. IWANE ◽  
Toshio YANAGIDA

2021 ◽  
Author(s):  
Hugo Arellano-Santoyo ◽  
Rogelio A Hernandez-Lopez ◽  
Emma Stokasimov ◽  
Ray YR Wang ◽  
David Pellman ◽  
...  

The microtubule (MT) cytoskeleton is central to cellular processes including axonal growth, intracellular transport, and cell division, all of which rely on precise spatiotemporal control of MT organization. Kinesin-8s play a key role in regulating MT length by combining highly processive directional motility with MT-end disassembly. However, how kinesin-8 switches between these two apparently opposing activities remains unclear. Here, we define the structural features underlying this molecular switch through cryo-EM analysis of the yeast kinesin-8, Kip3 bound to MTs, and molecular dynamics simulations to approximate the complex of Kip3 with the curved tubulin state found at the MT plus-end. By integrating biochemical and single-molecule biophysical assays, we identified specific intra- and intermolecular interactions that modulate processive motility and MT disassembly. Our findings suggest that Kip3 undergoes conformational changes in response to tubulin curvature that underlie its unique ability to interact differently with the MT lattice than with the MT-end.


2009 ◽  
Vol 187 (1) ◽  
pp. 53-60 ◽  
Author(s):  
Sivaraj Sivaramakrishnan ◽  
James A. Spudich

Unconventional myosins interact with the dense cortical actin network during processes such as membrane trafficking, cell migration, and mechanotransduction. Our understanding of unconventional myosin function is derived largely from assays that examine the interaction of a single myosin with a single actin filament. In this study, we have developed a model system to study the interaction between multiple tethered unconventional myosins and a model F-actin cortex, namely the lamellipodium of a migrating fish epidermal keratocyte. Using myosin VI, which moves toward the pointed end of actin filaments, we directly determine the polarity of the extracted keratocyte lamellipodium from the cell periphery to the cell nucleus. We use a combination of experimentation and simulation to demonstrate that multiple myosin VI molecules can coordinate to efficiently transport vesicle-size cargo over 10 µm of the dense interlaced actin network. Furthermore, several molecules of monomeric myosin VI, which are nonprocessive in single molecule assays, can coordinate to transport cargo with similar speeds as dimers.


Biopolymers ◽  
2007 ◽  
Vol 85 (2) ◽  
pp. 169-184 ◽  
Author(s):  
S. Elizabeth McDowell ◽  
Nad'a Špačková ◽  
Jiří Šponer ◽  
Nils G. Walter

1998 ◽  
Vol 543 ◽  
Author(s):  
A. Huwe ◽  
F. Kremer ◽  
M. Arndt ◽  
P. Behrens ◽  
W. Schwieger ◽  
...  

AbstractBroadband dielectric spectroscopy (10−2 Hz - 109Hz) is employed to study the molecular dynamics of low-molecular-weight glassforming liquids being confined to nanopores. For the H-bond forming liquid propylene glycol being confined to (uncoated and silanized) nanopores (pore size: 2.5 nm, 5.0 nm and 7.5 nm) a molecular dynamics is observed which is comparable to that of the bulk liquid. Due to surface effects in uncoated nanopores the relaxation time distribution is broadened on the long term side and the mean relaxation rate is decreased by about half a decade. This effect can be counterbalanced by lubricating the inner surfaces of the pores resulting in a relaxation rate which is slightly faster compared to the bulk liquid. For the H-bonded liquid ethylene glycol (EG) embedded in zeolites of different pore size and topology one observes a sharp transition from a single-molecule dynamics to that of a liquid depending on the coordination number of the confined molecules. While EG in silicalite (showing a single molecule relaxation) has four neighboring molecules, EG in zeolite beta or AIPO4-5 has a coordination number of five and behaves like a bulk liquid.


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