The Application of the OPTICS Algorithm to Cluster Analysis in Atom Probe Tomography Data

2019 ◽  
Vol 25 (2) ◽  
pp. 338-348 ◽  
Author(s):  
Jing Wang ◽  
Daniel K. Schreiber ◽  
Nathan Bailey ◽  
Peter Hosemann ◽  
Mychailo B. Toloczko

AbstractAtom probe tomography (APT) is a powerful technique to characterize buried three-dimensional nanostructures in a variety of materials. Accurate characterization of those nanometer-scale clusters and precipitates is of great scientific significance to understand the structure–property relationships and the microstructural evolution. The current widely used cluster analysis method, a variant of the density-based spatial clustering of applications with noise algorithm, can only accurately extract clusters of the same atomic density, neglecting several experimental realities, such as density variations within and between clusters and the nonuniformity of the atomic density in the APT reconstruction itself (e.g., crystallographic poles and other field evaporation artifacts). This clustering method relies heavily on multiple input parameters, but ideal selection of those parameters is challenging and oftentimes ambiguous. In this study, we utilize a well-known cluster analysis algorithm, called ordering points to identify the clustering structures, and an automatic cluster extraction algorithm to analyze clusters of varying atomic density in APT data. This approach requires only one free parameter, and other inputs can be estimated or bounded based on physical parameters, such as the lattice parameter and solute concentration. The effectiveness of this method is demonstrated by application to several small-scale model datasets and a real APT dataset obtained from an oxide-dispersion strengthened ferritic alloy specimen.

2021 ◽  
pp. 1-10
Author(s):  
Przemysław Klupś ◽  
Daniel Haley ◽  
Andrew J. London ◽  
Hazel Gardner ◽  
James Famelton ◽  
...  

One of the main capabilities of atom probe tomography (APT) is the ability to not only identify but also characterize early stages of precipitation at length scales that are not achievable by other techniques. One of the most popular methods to identify nanoscale clustering in APT data, based on the density-based spatial clustering of applications with noise (DBSCAN), is used extensively in many branches of research. However, it is common that not all of the steps leading to the selection of certain parameters used in the analysis are reported. Without knowing the rationale behind parameter selection, it may be difficult to compare cluster parameters obtained by different researchers. In this work, a simple open-source tool, PosgenPy, is used to justify cluster search parameter selection via providing a systematic sweep through parameter values with multiple randomizations to minimize a false-positive cluster ratio. The tool is applied to several different microstructures: a simulated material system and two experimental datasets from a low-alloy steel . The analyses show how values for the various parameters can be selected to ensure that the calculated cluster number density and cluster composition are accurate.


2015 ◽  
Vol 5 (1) ◽  
Author(s):  
Z. W. Zhang ◽  
L. Yao ◽  
X.-L. Wang ◽  
M. K. Miller

Abstract A new class of advanced structural materials, based on the Fe-O-vacancy system, has exceptional resistance to high-temperature creep and excellent tolerance to extremely high-dose radiation. Although these remarkable improvements in properties compared to steels are known to be associated with the Y-Ti-O-enriched nanoclusters, the roles of vacancies in facilitating the nucleation of nanoclusters are a long-standing puzzle, due to the experimental difficulties in characterizing vacancies, particularly in-situ while the nanoclusters are forming. Here we report an experiment study that provides the compelling evidence for the presence of significant concentrations of vacancies in Y-Ti-O-enriched nanoclusters in a nanostructured ferritic alloy using a combination of state-of-the-art atom-probe tomography and in situ small angle neutron scattering. The nucleation of nanoclusters starts from the O-enriched solute clustering with vacancy mediation. The nanoclusters grow with an extremely low growth rate through attraction of vacancies and O:vacancy pairs, leading to the unusual stability of the nanoclusters.


2014 ◽  
Vol 1645 ◽  
Author(s):  
L. Yao ◽  
M. K. Miller

ABSTRACTA novel atom probe tomography (APT) method has been developed that enables a full description of the orientation relationship between individual grains to be determined together with estimates of the extents of solute segregation for all elements over the surface of the grain boundary with 1 nm by 1 nm spatial resolution. This approach also enables variations in the solute excess for the elements with the habit plane and curvature of the grain boundary to be evaluated. The method has been applied to a mechanically-alloyed nanostructured ferritic alloy (NFA) after high dose heavy ion irradiation. The innovative high-resolution two-dimensional mapping of the solute segregation across the surface of grain boundaries in the NFA clearly demonstrates that the distributions of chromium and tungsten are not uniform across the grain boundaries, and the distributions correlate with changes in its local curvature and the position of the grain boundary precipitates. These features pin the grain boundary against grain growth and provide the stability for excellent creep properties.


2017 ◽  
Vol 23 (2) ◽  
pp. 227-237 ◽  
Author(s):  
Tomas L. Martin ◽  
Andrew J. London ◽  
Benjamin Jenkins ◽  
Sarah E. Hopkin ◽  
James O. Douglas ◽  
...  

AbstractThe local electrode atom probe (LEAP) has become the primary instrument used for atom probe tomography measurements. Recent advances in detector and laser design, together with updated hit detection algorithms, have been incorporated into the latest LEAP 5000 instrument, but the implications of these changes on measurements, particularly the size and chemistry of small clusters and elemental segregations, have not been explored. In this study, we compare data sets from a variety of materials with small-scale chemical heterogeneity using both a LEAP 3000 instrument with 37% detector efficiency and a 532-nm green laser and a new LEAP 5000 instrument with a manufacturer estimated increase to 52% detector efficiency, and a 355-nm ultraviolet laser. In general, it was found that the number of atoms within small clusters or surface segregation increased in the LEAP 5000, as would be expected by the reported increase in detector efficiency from the LEAP 3000 architecture, but subtle differences in chemistry were observed which are attributed to changes in the way multiple hit detection is calculated using the LEAP 5000.


2020 ◽  
Vol 142 (6) ◽  
Author(s):  
John A. Bayless ◽  
Phillip A. Voglewede

Abstract This paper addresses the challenge of commissioning recreational boats with joystick control systems when the boat's physical parameters are not known. The work was conducted through matlab simulations and scale-model physical testing. The outcome is a working nonlinear, closed-loop control methodology shown on a small-scale prototype boat. The control methodology, L1 adaptive control (L1AC), provides adaptive velocity and angular velocity control. The control system delivers performance levels that could reduce the cost of commissioning boats with joystick control, improve overall performance, and potentially enable the technology to support new boat markets.


2020 ◽  
Vol 26 (2) ◽  
pp. 247-257 ◽  
Author(s):  
Benjamin M. Jenkins ◽  
Frédéric Danoix ◽  
Mohamed Gouné ◽  
Paul A.J. Bagot ◽  
Zirong Peng ◽  
...  

AbstractInterfaces play critical roles in materials and are usually both structurally and compositionally complex microstructural features. The precise characterization of their nature in three-dimensions at the atomic scale is one of the grand challenges for microscopy and microanalysis, as this information is crucial to establish structure–property relationships. Atom probe tomography is well suited to analyzing the chemistry of interfaces at the nanoscale. However, optimizing such microanalysis of interfaces requires great care in the implementation across all aspects of the technique from specimen preparation to data analysis and ultimately the interpretation of this information. This article provides critical perspectives on key aspects pertaining to spatial resolution limits and the issues with the compositional analysis that can limit the quantification of interface measurements. Here, we use the example of grain boundaries in steels; however, the results are applicable for the characterization of grain boundaries and transformation interfaces in a very wide range of industrially relevant engineering materials.


2014 ◽  
Vol 20 (6) ◽  
pp. 1662-1671 ◽  
Author(s):  
Eric Aimé Jägle ◽  
Pyuck-Pa Choi ◽  
Dierk Raabe

AbstractAtom-probe tomography is a materials characterization method ideally suited for the investigation of clustering and precipitation phenomena. To distinguish the clusters from the surrounding matrix, the maximum separation algorithm is widely employed. However, the results of the cluster analysis strongly depend on the parameters used in the algorithm and hence, a wrong choice of parameters leads to erroneous results, e.g., for the cluster number density, concentration, and size. Here, a new method to determine the optimum value of the parameter dmax is proposed, which relies only on information contained in the measured atom-probe data set. Atom-probe simulations are employed to verify the method and to determine the sensitivity of the maximum separation algorithm to other input parameters. In addition, simulations are used to assess the accuracy of cluster analysis in the presence of trajectory aberrations caused by the local magnification effect. In the case of Cu-rich precipitates (Cu concentration 40–60 at% and radius 0.25–1.0 nm) in a bcc Fe–Si–Cu matrix, it is shown that the error in concentration is below 10 at% and the error in radius is <0.15 nm for all simulated conditions, provided that the correct value for dmax, as determined with the newly proposed method, is employed.


2022 ◽  
Author(s):  
Yue Li ◽  
Ye Wei ◽  
Zhangwei Wang ◽  
Timoteo Colnaghi ◽  
Liuliu Han ◽  
...  

Abstract Chemical short-range order (CSRO) refers to atoms of specific elements self-organising within a disordered crystalline matrix. These particular atomic neighbourhoods can modify the mechanical and functional performances of materials 1-6. CSRO is typically characterized indirectly, using volume-averaged (e.g. X-ray/neutron scattering) 2,7,8 or through projection (i.e. two-dimensional) microscopy techniques 5,6,9,10 that fail to capture the complex, three-dimensional atomistic architectures. Quantitative assessment of CSRO and concrete structure-property relationships remain unachievable. Here, we present a machine-learning enhanced approach to break the inherent resolution limits of atom probe tomography to reveal three-dimensional analytical imaging of the size and morphology of multiple CSRO. We showcase our approach by addressing a long-standing question encountered in a body-centred-cubic Fe-18Al (at.%) solid solution alloy that sees anomalous property changes upon heat treatment 2. After validating our method against artificial data for ground truth, we unearth non-statistical B2-CSRO (FeAl) instead of the generally-expected D03-CSRO (Fe3Al) 11,12. We propose quantitative correlations among annealing temperature, CSRO, and the nano-hardness and electrical resistivity, supported by atomistic simulations. The proposed strategy can be generally employed to investigate short/medium/long-range ordering phenomena in a vast array of materials and help design future high-performance materials.


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