scholarly journals Conservation status and a novel restoration of the endangered freshwater mussel Unio crassus Philipsson, 1788: Poland case

2021 ◽  
pp. 3
Author(s):  
Marianna Soroka ◽  
Barbara Wasowicz ◽  
Katarzyna Zając
Keyword(s):  
Genetic Diversity ◽  
Conservation Status ◽  
Freshwater Mussel ◽  
Freshwater Ecosystems ◽  
Anthropogenic Influence ◽  
Population Abundance ◽  
Protection Measures ◽  
Active Protection ◽  
New Localities ◽  
Improve Water Quality

Bivalves play an important part in freshwater ecosystems and improve water quality; the thick-shelled river mussel Unio crassus is classified as a bioindicator. Unfortunately, the species is regarded as endangered and is under species protection in the whole of Europe. The reasons for the drastic decline of its populations are: considerable eutrophication of waters, anthropogenic influence in its broad sense and the presence of invasive species. The life cycle of U. crassus includes the stage of larva which is an obligatory parasite of fish. This makes it possible for the species to disperse and populate new territories but it limits the development to places where appropriate host species are available. Intensive measures have been taken in Poland to protect U. crassus, while in France numerous new localities of the species have been bar-coded. In 2010–2014 active protection measures were taken in southern Poland, including inventorying, studies of genetic diversity and reintroductions. The project contributed to the increase in population abundance and in the number of localities of the thick-shelled river mussel, which resulted in a twofold increase in the range of occurrence of the species in the river. The procedures presented here can and should be used in further restitution of U. crassus not only in Poland but also elsewhere in Europe.

scholarly journals The Patterns and Puzzles of Genetic Diversity of Endangered Freshwater Mussel Unio crassus Philipsson, 1788 Populations from Vistula and Neman Drainages (Eastern Central Europe)

Life ◽  
2020 ◽  
Vol 10 (7) ◽  
pp. 119
Author(s):  
Adrianna Kilikowska ◽  
Monika Mioduchowska ◽  
Anna Wysocka ◽  
Agnieszka Kaczmarczyk-Ziemba ◽  
Joanna Rychlińska ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Genetic Structure ◽  
Spatial Scales ◽  
Freshwater Mussel ◽  
Its Region ◽  
Strong Relationship ◽  
Mantel Test ◽  
Freshwater Ecosystems ◽  
Hierarchical Organization ◽  
Anthropogenic Factors

Mussels of the family Unionidae are important components of freshwater ecosystems. Alarmingly, the International Union for Conservation of Nature and Natural Resources Red List of Threatened Species identifies almost 200 unionid species as extinct, endangered, or threatened. Their decline is the result of human impact on freshwater habitats, and the decrease of host fish populations. The Thick Shelled River Mussel Unio crassus Philipsson, 1788 is one of the examples that has been reported to show a dramatic decline of populations. Hierarchical organization of riverine systems is supposed to reflect the genetic structure of populations inhabiting them. The main goal of this study was an assessment of the U. crassus genetic diversity in river ecosystems using hierarchical analysis. Different molecular markers, the nuclear ribosomal internal transcribed spacer ITS region, and mitochondrial DNA genes (cox1 and ndh1), were used to examine the distribution of U. crassus among-population genetic variation at multiple spatial scales (within rivers, among rivers within drainages, and between drainages of the Neman and Vistula rivers). We found high genetic structure between both drainages suggesting that in the case of the analyzed U. crassus populations we were dealing with at least two different genetic units. Only about 4% of the mtDNA variation was due to differences among populations within drainages. However, comparison of population differentiation within drainages for mtDNA also showed some genetic structure among populations within the Vistula drainage. Only one haplotype was shared among all Polish populations whereas the remainder were unique for each population despite the hydrological connection. Interestingly, some haplotypes were present in both drainages. In the case of U. crassus populations under study, the Mantel test revealed a relatively strong relationship between genetic and geographical distances. However, in detail, the pattern of genetic diversity seems to be much more complicated. Therefore, we suggest that the observed pattern of U. crassus genetic diversity distribution is shaped by both historical and current factors i.e. different routes of post glacial colonization and history of drainage systems, historical gene flow, and more recent habitat fragmentation due to anthropogenic factors.

Conservation, Ecology, and Management of Catfish: The Second International Symposium

2011 ◽  
Keyword(s):  
Food Source ◽  
Conservation Status ◽  
Freshwater Mussel ◽  
Freshwater Ecosystems ◽  
State Laws ◽  
Mussel Species ◽  
Symbiotic Relationships ◽  
Mussel Shells ◽  
The Many ◽  
Freshwater Mollusks

<em>Abstract</em>.—Catfishes are important in freshwater ecosystems not only as consumers, but also as essential partners in symbiotic relationships with other organisms. Freshwater mollusks are among the many organisms that have interactions with catfishes. For example, ictalurids are hosts for larvae of several native freshwater mussel species. The larvae, which attach briefly to gills or fins of fish to complete their development to the free-living juvenile stage, disperse via upstream and downstream movement of host fish. In turn, freshwater mussels serve as a food source for some catfish species while other catfish species may use spent mussel shells for habitat. Ictalurids also benefit from the conservation status of many freshwater mussel species. Federal and state laws protecting these invertebrates can preserve water quality and habitat and, at times, provide incentives and funding for conservation and restoration of stream and riparian habitats.

scholarly journals A Conflict between Traditional Flood Measures and Maintaining River Ecosystems? A Case Study Based upon the River Lærdal, Norway

Water ◽  
2021 ◽  
Vol 13 (14) ◽  
pp. 1884
Author(s):  
Ana Juárez ◽  
Knut Alfredsen ◽  
Morten Stickler ◽  
Ana Adeva-Bustos ◽  
Rodrigo Suárez ◽  
...  
Keyword(s):  
Remote Sensing Data ◽  
Freshwater Ecosystems ◽  
River Channel ◽  
Flood Mitigation ◽  
Mitigation Measures ◽  
Flood Events ◽  
Protection Measures ◽  
River Ecosystems ◽  
Hydraulic Models

Floods are among the most damaging of natural disasters, and flood events are expected to increase in magnitude and frequency with the effects of climate change and changes in land use. As a consequence, much focus has been placed on the engineering of structural flood mitigation measures in rivers. Traditional flood protection measures, such as levees and dredging of the river channel, threaten floodplains and river ecosystems, but during the last decade, sustainable reconciliation of freshwater ecosystems has increased. However, we still find many areas where these traditional measures are proposed, and it is challenging to find tools for evaluation of different measures and quantification of the possible impacts. In this paper, we focus on the river Lærdal in Norway to (i) present the dilemma between traditional flood measures and maintaining river ecosystems and (ii) quantify the efficiency and impact of different solutions based on 2D hydraulic models, remote sensing data, economics, and landscape metrics. Our results show that flood measures may be in serious conflict with environmental protection and legislation to preserve biodiversity and key nature types.

scholarly journals Update of distribution, habitats, population size, and threat factors for the West African crocodile in Mauritania

2016 ◽  
Vol 37 (3) ◽  
pp. 325-330 ◽  
Author(s):  
João Carlos Campos ◽  
Fernando Martínez-Freiría ◽  
Fábio Vieira Sousa ◽  
Frederico Santarém ◽  
José Carlos Brito
Keyword(s):  
Population Size ◽  
Conservation Status ◽  
West African ◽  
Conservation Strategies ◽  
Temperature Extremes ◽  
Local Conservation ◽  
The West ◽  
Water Abstraction ◽  
New Localities ◽  
Domestic Use

The West African crocodile (Crocodylus suchus) is an emblematic species from the Sahara-Sahel with scarce knowledge on distribution and conservation status. This study updated the knowledge on distribution, occupied habitats, population size, and factors that threaten C. suchus and its habitats in Mauritania. Five field expeditions to Mauritania (2011-2016), allowed the detection of 26 new localities, increasing by 27% the current number of all known locations (adding up to ). In most localities less than five individuals were observed, and in all visiting sites the number of observed individuals ranged from one to 23. Eleven threat factors were identified, being droughts and temperature extremes (100% localities affected) and water abstraction for domestic use and nomadic grazing (94%) the most frequent. These findings suggest that crocodiles are apparently vulnerable in Mauritania and that future local conservation strategies are needed to assure the continuity of its fragile populations and preserve their habitats.

scholarly journals Microsatellite genotyping from faeces of Lontra longicaudis from southern Brazil

2009 ◽  
Vol 99 (1) ◽  
pp. 5-11 ◽  
Author(s):  
Laura I. Weber ◽  
Cintia G. Hildebrand ◽  
Anderson Ferreira ◽  
Gustavo Pedarassi ◽  
José A. Levy ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Conservation Status ◽  
Significant Degree ◽  
Southern Brazil ◽  
High Genetic Diversity ◽  
Low Degree ◽  
Faecal Samples ◽  
High Level ◽  
Degree Of Differentiation ◽  
Lontra Longicaudis

A genetic study of the neotropical river otter Lontra longicaudis (Olfers, 1818), which has an unknown conservation status, was carried out at the Taim Ecological Station and the margins of the Vargas stream, Rio Grande do Sul, southern Brazil. Faecal samples were collected, and DNA was extracted using a silica-guanidine method. Five microsatellite loci were amplified using PCR with heterologous primers previously described for Lutra lutra (Linnaeus, 1758). Sixteen faecal samples out of 29 from Taim and 11 out of 14 from Vargas stream margins contained enough DNA for genetic analysis. A total of 49 different alleles were found at both localities, from which 18 were exclusively found in individuals from Taim and 17 were exclusives from Vargas individuals. The most common allele was the same at both locations for three loci (Lut715, Lut733, and Lut818). A high level of genetic diversity was found at both sites (NeTaim=4.1, HoTaim=0.299, HeTaim=0.681; NeVargas=4.9, HoVargas=0.355, HeVargas=0.724), being higher at the Vargas stream site. A high and significant level of heterozygote deficiency was observed at most loci according to the χ2 test. The homogeneity χ2 test (P<0.001) showed that there were significant differences in the allele frequencies between the two locations. Genotyping for more than one locus was possible in 81.5% of samples, from which only 37% were possible to genotype for more than three loci. A low degree of relatedness was found among individuals from Taim (R=0.055±0.310), but an even lower value of relatedness was found at the Vargas site (R= -0.285±0.440). The significant degree of differentiation (I=0.890; F ST=0.059) found between Taim and Vargas individuals suggests that there is more than one population of otters in the southern extreme of Brazil, which probably are associated with the water body systems found in this region, the Mirim and the Caiuvá/Flores/Mangueira Lagoons. The high genetic diversity and low relatedness found at the Vargas stream, lead us to believe that the Vargas stream may be acting as a corridor between these water bodies for otter dispersion.

scholarly journals Unveiling the conservation status of the sessile oak forest for their protection and management in the northeast of the Iberian Peninsula

2021 ◽  
Vol 42 ◽  
pp. e70549
Author(s):  
Jordi Bou ◽  
Lluís Vilar
Keyword(s):  
Iberian Peninsula ◽  
Conservation Status ◽  
Climatic Conditions ◽  
Conservation Strategy ◽  
Oak Forests ◽  
Oak Forest ◽  
Current Conservation ◽  
Protection Measures ◽  
Sessile Oak ◽  
Characteristic Species

The sessile oak forests found on the northeast of the Iberian Peninsula are ascribed to the Lathyro-Quercetumpetraeae association and play a key role in understanding the ecology of this habitat, as this region represents its xeric limit. For this reason, we analysed the biodiversity patterns and current conservation status of the sessile oak forests in the region. To do so, we collected Braun-Blanquet inventories of 34 plots randomly distributed throughout the sessile oak forests. The results showed a relationship between the climatic conditions and the biodiversity variables. While the richness of the community increased with decreasing temperatures, the characteristic species found within the community decreased at these same temperatures. This result was due to the presence of most companion species in the cool zones at high elevations.Sessile oaks are found close to other communities, such as silver birches and Scot pine forests.On the other hand, in the warm areas at low elevations, the sessile oak community was more established, with plants typical of this type of forest. These slightly warmer zones with sessile oaks are very important in terms of conservation and more vulnerable to climate change and the thermophilization of the community, as has been studied. As such, protecting and managing these forests is key to conserving this community. Nevertheless, as current protection measures do not safeguard most of these forests, it is essential to define a conservation strategy to preserve them. Using the conservation status, we have established criteria to improve the conservation strategy for sessile oak forest on the NE Iberian Peninsula.

scholarly journals Genetic Diversity of Indigenous Pigs from South China Area Revealed by SNP Array

Animals ◽  
2019 ◽  
Vol 9 (6) ◽  
pp. 361 ◽  
Author(s):  
Shuqi Diao ◽  
Shuwen Huang ◽  
Zhiting Xu ◽  
Shaopan Ye ◽  
Xiaolong Yuan ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Population Size ◽  
Effective Population Size ◽  
Conservation Status ◽  
Snp Array ◽  
Size Analysis ◽  
Selection Signatures ◽  
Effective Population ◽  
Low Genetic Diversity ◽  
Indigenous Pigs

To investigate the genetic diversity, population structure, extent of linkage disequilibrium (LD), effective population size (Ne), and selection signatures in indigenous pigs from Guangdong and Guangxi in China, 226 pigs belonging to ten diverse populations were genotyped using single nucleotide polymorphism (SNP) chips. The genetic divergence between Chinese and Western pigs was determined based on the SNP chip data. Low genetic diversity of Dahuabai (DHB), Luchuan (LC), Lantang (LT), and Meihua (MH) pigs, and introgression of Western pigs into Longlin (LL), MH, and Yuedonghei (YDH) pigs were detected. Analysis of the extent of LD showed that indigenous pigs had low LD when pairwise SNP distance was short and high LD when pairwise SNP distance was long. Effective population size analysis showed a rapid decrease for Chinese indigenous pigs, and some pig populations had a relatively small Ne. This result indicated the loss of genetic diversity in indigenous pigs, and introgression from Western commercial pigs. Selection signatures detected in this study overlapped with meat quality traits, such as drip loss, intramuscular fat content, meat color b*, and average backfat thickness. Our study deepened understanding of the conservation status and domestication of Chinese indigenous pigs.

scholarly journals New localities and distribution models inform the conservation status of the endangered lizard Anolis guamuhaya (Squamata: Dactyloidae) in central Cuba

2020 ◽  
Vol 19 (1) ◽  
pp. 13-33
Author(s):  
Tomás M. Rodríguez-Cabrera ◽  
Javier Torres ◽  
Carlos A. Mancina ◽  
Ruben Marrero ◽  
Yasel U. Alfonso ◽  
...  
Keyword(s):  
Ecological Niche ◽  
Ecological Niche Modeling ◽  
New Records ◽  
Global Climate ◽  
Conservation Status ◽  
Niche Modeling ◽  
Distribution Models ◽  
Area Of Occupancy ◽  
New Localities ◽  
Iucn Criteria

New localities and distribution models inform the conservation status of the endangered lizard Anolis guamuhaya (Squamata: Dactyloidae) from central Cuba. Anolis guamuhaya is known from seven localities restricted to the Guamuhaya Massif in central Cuba and is always associated with mountane ecosystems above 300 m a.s.l. Previous evaluations of the conservation status of the species based on the estimated number of mature individuals have categorized the anole as Endangered. Eight new records of A. guamuhaya are provided here. These double the number of known localities, and two represent the first records of the species in lowland areas, apart from the Guamuhaya Massif. The new records extend the elevational range of the species from 15 m to above 1000 m. We used ecological niche modeling based on all of the locality records, along with what we considered the most appropriate IUCN criteria according to the available information (Criterion B) to reevaluate the conservation status of the species. These new records of A. guamuhaya increase its area of occupancy up to a total of 60 km2 , and its extent of occurrence up to 648 km2 . Despite this increase in geographic range, the species meets the IUCN criteria in the category of Endangered. We used ecological niche modeling to predict possible trends for the species under differing scenarios of global climate change, all of which portend a drastic reduction in area climatically suitable for A. guamuhaya.

scholarly journals Structure and Genetic Diversity of Nine Important Landraces of Capsicum Species Cultivated in the Yucatan Peninsula, Mexico

Agronomy ◽  
2019 ◽  
Vol 9 (7) ◽  
pp. 376 ◽  
Author(s):  
Lucero del C. López Castilla ◽  
René Garruña Hernández ◽  
Crescencio de la Cruz Castillo Aguilar ◽  
Aida Martínez-Hernández ◽  
Matilde Margarita Ortiz-García ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Genetic Relationships ◽  
Yucatan Peninsula ◽  
Conservation Status ◽  
Sustainable Use ◽  
Issr Markers ◽  
Southern Mexico ◽  
Yucatán Peninsula ◽  
Capsicum Spp ◽  
Capsicum Species

Mexico has a wealth of Capsicum species, which has led to the development of a large number of chili pepper landraces. A great wealth of Capsicum germplasm can be found in southern Mexico in the Yucatan Peninsula, an important area of diversification of Capsicum annuum. Specifically, in the western Yucatan Peninsula, three of the five domesticated species of Capsicum (C. annuum, C. chinense and C. frutescens) have been reported. However, information on their genetic diversity, conservation status and potential use is lacking. To generate useful information toward the sustainable use, management and conservation of these species, we evaluated the structure, diversity and genetic relationships of nine accessions of Capsicum spp., of major importance cultivated in the western Yucatan Peninsula using 42 ISSR loci. The results indicated that these accessions consisted of three genetic groups that were defined by the respective species of each accession. The level of genetic diversity was moderate and distributed mainly among accessions. The ISSR markers detected a high level of polymorphism and allowed the genetic differentiation of the C. annuum complex. The results indicated that the accessions collected in the western Yucatan Peninsula constitute a valuable genetic resource that can be used in genetic improvement and conservation programs.

scholarly journals Abundance and genetic diversity responses of a lizard (Eulamprus heatwolei) to logging disturbance

2017 ◽  
Vol 65 (6) ◽  
pp. 362
Author(s):  
Francesca Lyndon-Gee ◽  
Joanna Sumner ◽  
Yang Hu ◽  
Claudio Ciofi ◽  
Tim S. Jessop
Keyword(s):  
Genetic Diversity ◽  
Forest Management ◽  
Management Practices ◽  
Forest Disturbance ◽  
Population Level ◽  
Landscape Scale ◽  
Population Abundance ◽  
Animal Populations ◽  
Eastern Australia ◽  
Logging Disturbance

Rotational logging practices are used with the goal of reducing forest disturbance impacts on biodiversity. However, it is poorly understood whether such forest management practices conserve the demographic and genetic composition of animal populations across logged landscapes. Here we investigated whether rotational logging practices alter patterns of landscape-scale population abundance and genetic diversity of a forest-dwelling lizard (Eulamprus heatwolei) in south-eastern Australia. We sampled lizards (n = 407) at up to 48 sites across a chronosequence of logging disturbance intervals (<10 to >60 years after logging) to assess site-specific population changes and genetic diversity parameters. Lizard abundances exhibited a significant curvilinear response to time since logging, with decreased numbers following logging (<10 years), increased abundance as the forest regenerated (10–20 years), before decreasing again in older regenerated forest sites (>30 years). Lizard genetic diversity parameters were not significantly influenced by logging disturbance. These results suggest that logging practices, whilst inducing short-term changes to population abundance, had no measurable effects on the landscape-scale genetic diversity of E. heatwolei. These results are important as they demonstrate the value of monitoring for evaluating forest management efficacy, and the use of different population-level markers to make stronger inference about the potential impacts of logging activities.

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