NIRS Calibration of Aflatoxin in Maize

2018 ◽  
Vol 71 (11) ◽  
pp. 868 ◽  
Author(s):  
Ross E. Darnell ◽  
Jagger J. Harvey ◽  
Glen P. Fox ◽  
Mary T. Fletcher ◽  
James Wainaina ◽  
...  
Keyword(s):  
Near Infrared ◽  
False Negative ◽  
Field Trials ◽  
Aflatoxin Contamination ◽  
Machine Learning Techniques ◽  
Support Vector ◽  
Machine Method ◽  
Breeding Programs ◽  
Wet Chemistry ◽  
Learning Techniques

The aim of this study is to determine the value of near-infrared spectroscopy (NIRS) as a diagnostic tool for aflatoxin contamination, specifically to rapidly predict levels of aflatoxin, either quantitatively or qualitatively, in ground maize. Maize was collected from inoculated field trials conducted across four sites in Kenya. Inoculated and uninoculated maize ears were harvested, milled, and prepared for NIRS scanning and wet chemistry-based aflatoxin quantification. Several statistical and machine learning techniques were compared. Absorbance at a single bandwidth explained 34 % of the variation in levels of aflatoxin using a regression model while a partial least-squares (PLS) method showed that NIR measurements could explain 42 % of the variation in aflatoxin levels. To compare various methods for their ability to classify samples with high (>100 ppb) levels of aflatoxin, various additional procedures were applied. The k-nearest neighbour classification method yielded sensitivity and specificity values of 0.75 and 0.52 respectively, compared with the support vector machine method with estimates of 0.81 and 0.68, whereas PLS could achieve values of 0.82 and 0.72 respectively. The corresponding false positive and false negative values are still unacceptable for NIRS to be used with confidence, as ~18 % of contaminated ground maize samples would be accepted and 28 % of good maize would be discarded or declared contaminated or downgraded. However, such calibrations could be useful in breeding programs without access to wet chemistry analysis, seeking to rank entries semiquantitatively.

scholarly journals Machine learning techniques as an efficient alternative diagnostic tool for COVID-19 cases

2021 ◽  
Keyword(s):  
Machine Learning ◽  
Deep Learning ◽  
Sensitivity And Specificity ◽  
Predictive Power ◽  
Characteristic Curve ◽  
False Negative ◽  
Machine Learning Techniques ◽  
Support Vector ◽  
X Ray ◽  
Learning Techniques

Background: The SARS-CoV-2 virus has demonstrated the weakness of many health systems worldwide, creating a saturation and lack of access to treatments. A bottleneck to fight this pandemic relates to the lack of diagnostic infrastructure for early detection of positive cases, particularly in rural and impoverished areas of developing countries. In this context, less costly and fast machine learning (ML) diagnosis-based systems are helpful. However, most of the research has focused on deep-learning techniques for diagnosis, which are computationally and technologically expensive. ML models have been mainly used as a benchmark and are not entirely explored in the existing literature on the topic of this paper. Objective: To analyze the capabilities of ML techniques (compared to deep learning) to diagnose COVID-19 cases based on X-ray images, assessing the performance of these techniques and using their predictive power for such a diagnosis. Methods: A factorial experiment was designed to establish this power with X-ray chest images of healthy, pneumonia, and COVID-19 infected patients. This design considers data-balancing methods, feature extraction approaches, different algorithms, and hyper-parameter optimization. The ML techniques were evaluated based on classification metrics, including accuracy, the area under the receiver operating characteristic curve (AUROC), F1-score, sensitivity, and specificity. Results: The design of experiment provided the mean and its confidence intervals for the predictive capability of different ML techniques, which reached AUROC values as high as 90% with suitable sensitivity and specificity. Among the learning algorithms, support vector machines and random forest performed best. The down-sampling method for unbalanced data improved the predictive power significantly for the images used in this study. Conclusions: Our investigation demonstrated that ML techniques are able to identify COVID-19 infected patients. The results provided suitable values of sensitivity and specificity, minimizing the false-positive or false-negative rates. The models were trained with significantly low computational resources, which helps to provide access and deployment in rural and impoverished areas.

scholarly journals Predictive Analysis Of Breast Cancer Using Machine Learning Techniques

2019 ◽  
Vol 15 (29) ◽  
pp. 1-23 ◽  
Author(s):  
Rashmi Agrawal
Keyword(s):  
Breast Cancer ◽  
Machine Learning ◽  
Data Mining ◽  
Machine Learning Techniques ◽  
Predictive Analysis ◽  
Support Vector ◽  
International Institute ◽  
Machine Method ◽  
Linear Discriminant ◽  
Learning Techniques

This paper is a product of the research Project “Predictive Analysis Of Breast Cancer Using Machine Learning Techniques” performed in Manav Rachna International Institute of Research and Studies, Faridabad in the year 2018. Introduction: The present article is part of the effort to predict breast cancer which is a serious concern for women’s health. Problem: Breast cancer is the most common type of cancer and has always been a threat to women’s lives. Early diagnosis requires an effective method to predict cancer to allow physicians to distinguish benign and malicious cancer. Researchers and scientists have been trying hard to find innovative methods to predict cancer. Objective: The objective of this paper will be predictive analysis of breast cancer using various machine learning techniques like Naïve Bayes method, Linear Discriminant Analysis, K-Nearest Neighbors and Support Vector Machine method.  Methodology: Predictive data mining has become an instrument for scientists and researchers in the medical field. Predicting breast cancer at an early stage helps in better cure and treatment. KDD (Knowledge Discovery in Databases) is one of the most popular data mining methods used by medical researchers to identify the patterns and the relationship between variables and also helps in predicting the outcome of the disease based upon historical data of datasets. Results: To select the best model for cancer prediction, accuracy of all models will be estimated and the best model will be selected. Conclusion: This work seeks to predict the best technique with highest accuracy for breast cancer. Originality: This research has been performed using R and the dataset taken from UCI machine learning repository. Limitations: The lack of exact information provided by data.

Using Machine Learning Algorithms on Prediction of Stock Price

2020 ◽  
Vol 12 (2) ◽  
pp. 84-99
Author(s):  
Li-Pang Chen
Keyword(s):  
Machine Learning ◽  
Stock Price ◽  
Short Term Memory ◽  
Machine Learning Algorithms ◽  
Machine Learning Techniques ◽  
Support Vector ◽  
Short Term ◽  
Learning Techniques ◽  
Historical Database ◽  
Long Short Term Memory

In this paper, we investigate analysis and prediction of the time-dependent data. We focus our attention on four different stocks are selected from Yahoo Finance historical database. To build up models and predict the future stock price, we consider three different machine learning techniques including Long Short-Term Memory (LSTM), Convolutional Neural Networks (CNN) and Support Vector Regression (SVR). By treating close price, open price, daily low, daily high, adjusted close price, and volume of trades as predictors in machine learning methods, it can be shown that the prediction accuracy is improved.

A Comparative Study of Different Machine Learning Algorithms for Disease Prediction

2017 ◽  
Vol 7 (7) ◽  
pp. 172
Author(s):  
Anantvir Singh Romana
Keyword(s):  
Machine Learning ◽  
Subsequent Treatment ◽  
Machine Learning Algorithms ◽  
Machine Learning Techniques ◽  
Support Vector ◽  
Disease Prediction ◽  
Classification Problems ◽  
Learning Techniques ◽  
Neural Network Classifiers ◽  
Diagnostic Detection

Accurate diagnostic detection of the disease in a patient is critical and may alter the subsequent treatment and increase the chances of survival rate. Machine learning techniques have been instrumental in disease detection and are currently being used in various classification problems due to their accurate prediction performance. Various techniques may provide different desired accuracies and it is therefore imperative to use the most suitable method which provides the best desired results. This research seeks to provide comparative analysis of Support Vector Machine, Naïve bayes, J48 Decision Tree and neural network classifiers breast cancer and diabetes datsets.

scholarly journals Ablation Analysis to Select Wearable Sensors for Classifying Standing, Walking, and Running

Sensors ◽  
2020 ◽  
Vol 21 (1) ◽  
pp. 194
Author(s):  
Sarah Gonzalez ◽  
Paul Stegall ◽  
Harvey Edwards ◽  
Leia Stirling ◽  
Ho Chit Siu
Keyword(s):  
Activity Recognition ◽  
Principal Components ◽  
Classification Accuracy ◽  
Wearable Sensors ◽  
Sensor Data ◽  
Machine Learning Techniques ◽  
Support Vector ◽  
Learning Techniques ◽  
Measurement Units ◽  
The Difference

The field of human activity recognition (HAR) often utilizes wearable sensors and machine learning techniques in order to identify the actions of the subject. This paper considers the activity recognition of walking and running while using a support vector machine (SVM) that was trained on principal components derived from wearable sensor data. An ablation analysis is performed in order to select the subset of sensors that yield the highest classification accuracy. The paper also compares principal components across trials to inform the similarity of the trials. Five subjects were instructed to perform standing, walking, running, and sprinting on a self-paced treadmill, and the data were recorded while using surface electromyography sensors (sEMGs), inertial measurement units (IMUs), and force plates. When all of the sensors were included, the SVM had over 90% classification accuracy using only the first three principal components of the data with the classes of stand, walk, and run/sprint (combined run and sprint class). It was found that sensors that were placed only on the lower leg produce higher accuracies than sensors placed on the upper leg. There was a small decrease in accuracy when the force plates are ablated, but the difference may not be operationally relevant. Using only accelerometers without sEMGs was shown to decrease the accuracy of the SVM.

scholarly journals Predictive modeling for peri-implantitis by using machine learning techniques

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Tomoaki Mameno ◽  
Masahiro Wada ◽  
Kazunori Nozaki ◽  
Toshihito Takahashi ◽  
Yoshitaka Tsujioka ◽  
...  
Keyword(s):  
Machine Learning ◽  
Demographic Data ◽  
Risk Indicators ◽  
Machine Learning Techniques ◽  
Support Vector ◽  
Machine Learning Methods ◽  
Complex Interactions ◽  
Learning Techniques ◽  
Increased Risk ◽  
Vector Machines

AbstractThe purpose of this retrospective cohort study was to create a model for predicting the onset of peri-implantitis by using machine learning methods and to clarify interactions between risk indicators. This study evaluated 254 implants, 127 with and 127 without peri-implantitis, from among 1408 implants with at least 4 years in function. Demographic data and parameters known to be risk factors for the development of peri-implantitis were analyzed with three models: logistic regression, support vector machines, and random forests (RF). As the results, RF had the highest performance in predicting the onset of peri-implantitis (AUC: 0.71, accuracy: 0.70, precision: 0.72, recall: 0.66, and f1-score: 0.69). The factor that had the most influence on prediction was implant functional time, followed by oral hygiene. In addition, PCR of more than 50% to 60%, smoking more than 3 cigarettes/day, KMW less than 2 mm, and the presence of less than two occlusal supports tended to be associated with an increased risk of peri-implantitis. Moreover, these risk indicators were not independent and had complex effects on each other. The results of this study suggest that peri-implantitis onset was predicted in 70% of cases, by RF which allows consideration of nonlinear relational data with complex interactions.

scholarly journals Fugl-Meyer hand motor imagination recognition for brain–computer interfaces using only fNIRS

2021 ◽  
Author(s):  
Chenguang Li ◽  
Hongjun Yang ◽  
Long Cheng
Keyword(s):  
Classification Accuracy ◽  
Near Infrared ◽  
Support Vector ◽  
Classification Methods ◽  
Experimental Paradigm ◽  
Functional Near Infrared Spectroscopy ◽  
Machine Method ◽  
Physiological Signal ◽  
Computer Interfaces ◽  
Mode Decomposition

AbstractAs a relatively new physiological signal of brain, functional near-infrared spectroscopy (fNIRS) is being used more and more in brain–computer interface field, especially in the task of motor imagery. However, the classification accuracy based on this signal is relatively low. To improve the accuracy of classification, this paper proposes a new experimental paradigm and only uses fNIRS signals to complete the classification task of six subjects. Notably, the experiment is carried out in a non-laboratory environment, and movements of motion imagination are properly designed. And when the subjects are imagining the motions, they are also subvocalizing the movements to prevent distraction. Therefore, according to the motor area theory of the cerebral cortex, the positions of the fNIRS probes have been slightly adjusted compared with other methods. Next, the signals are classified by nine classification methods, and the different features and classification methods are compared. The results show that under this new experimental paradigm, the classification accuracy of 89.12% and 88.47% can be achieved using the support vector machine method and the random forest method, respectively, which shows that the paradigm is effective. Finally, by selecting five channels with the largest variance after empirical mode decomposition of the original signal, similar classification results can be achieved.

scholarly journals Big Data: New Tricks for Econometrics

2014 ◽  
Vol 28 (2) ◽  
pp. 3-28 ◽  
Author(s):  
Hal R. Varian
Keyword(s):  
Big Data ◽  
Linear Models ◽  
Neural Nets ◽  
Machine Learning Techniques ◽  
Support Vector ◽  
Learning Techniques ◽  
Model Complex ◽  
Vector Machines ◽  
Sheer Size ◽  
Complex Relationships

Computers are now involved in many economic transactions and can capture data associated with these transactions, which can then be manipulated and analyzed. Conventional statistical and econometric techniques such as regression often work well, but there are issues unique to big datasets that may require different tools. First, the sheer size of the data involved may require more powerful data manipulation tools. Second, we may have more potential predictors than appropriate for estimation, so we need to do some kind of variable selection. Third, large datasets may allow for more flexible relationships than simple linear models. Machine learning techniques such as decision trees, support vector machines, neural nets, deep learning, and so on may allow for more effective ways to model complex relationships. In this essay, I will describe a few of these tools for manipulating and analyzing big data. I believe that these methods have a lot to offer and should be more widely known and used by economists.

scholarly journals Heart disease prediction using machine learning techniques : a survey

2018 ◽  
Vol 7 (2.8) ◽  
pp. 684 ◽  
Author(s):  
V V. Ramalingam ◽  
Ayantan Dandapath ◽  
M Karthik Raja
Keyword(s):  
Machine Learning ◽  
Learning Algorithms ◽  
Machine Learning Algorithms ◽  
Machine Learning Techniques ◽  
Support Vector ◽  
Complex Data ◽  
Learning Techniques ◽  
Vector Machines ◽  
Supervised Learning Algorithms ◽  
Life Threatening

Heart related diseases or Cardiovascular Diseases (CVDs) are the main reason for a huge number of death in the world over the last few decades and has emerged as the most life-threatening disease, not only in India but in the whole world. So, there is a need of reliable, accurate and feasible system to diagnose such diseases in time for proper treatment. Machine Learning algorithms and techniques have been applied to various medical datasets to automate the analysis of large and complex data. Many researchers, in recent times, have been using several machine learning techniques to help the health care industry and the professionals in the diagnosis of heart related diseases. This paper presents a survey of various models based on such algorithms and techniques andanalyze their performance. Models based on supervised learning algorithms such as Support Vector Machines (SVM), K-Nearest Neighbour (KNN), NaïveBayes, Decision Trees (DT), Random Forest (RF) and ensemble models are found very popular among the researchers.

A sentiment analysis system for social media using machine learning techniques: Social enablement

2018 ◽  
Vol 34 (3) ◽  
pp. 569-581 ◽  
Author(s):  
Sujata Rani ◽  
Parteek Kumar
Keyword(s):  
Machine Learning ◽  
Social Media ◽  
Sentiment Analysis ◽  
Media Analysis ◽  
Training Data ◽  
Machine Learning Techniques ◽  
Support Vector ◽  
Analysis Tool ◽  
Data Set ◽  
Learning Techniques

Abstract In this article, an innovative approach to perform the sentiment analysis (SA) has been presented. The proposed system handles the issues of Romanized or abbreviated text and spelling variations in the text to perform the sentiment analysis. The training data set of 3,000 movie reviews and tweets has been manually labeled by native speakers of Hindi in three classes, i.e. positive, negative, and neutral. The system uses WEKA (Waikato Environment for Knowledge Analysis) tool to convert these string data into numerical matrices and applies three machine learning techniques, i.e. Naive Bayes (NB), J48, and support vector machine (SVM). The proposed system has been tested on 100 movie reviews and tweets, and it has been observed that SVM has performed best in comparison to other classifiers, and it has an accuracy of 68% for movie reviews and 82% in case of tweets. The results of the proposed system are very promising and can be used in emerging applications like SA of product reviews and social media analysis. Additionally, the proposed system can be used in other cultural/social benefits like predicting/fighting human riots.

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