scholarly journals Evolutionary lag times and recent origin of the biota of an ancient desert (Atacama-Sechura)

2013 ◽  
Vol 110 (28) ◽  
pp. 11469-11474 ◽  
Author(s):  
P. C. Guerrero ◽  
M. Rosas ◽  
M. T. K. Arroyo ◽  
J. J. Wiens
Keyword(s):  
Recent Origin ◽  
Lag Times ◽  
Evolutionary Lag

Responses of Platelets to Strains of Streptococcus sanguis: Findings in Healthy Subjects, Bernard-Soulier, Glanzmann’s, and Collagen-Unresponsive Patients

1987 ◽  
Vol 57 (02) ◽  
pp. 222-225 ◽  
Author(s):  
A H Soberay ◽  
M C Herzberg ◽  
J D Rudney ◽  
H K Nieuwenhuis ◽  
J J Sixma ◽  
...  
Keyword(s):  
Platelet Aggregation ◽  
Healthy Subjects ◽  
Normal Subjects ◽  
Membrane Glycoprotein ◽  
Response Mechanism ◽  
Platelet Response ◽  
Induce Platelet Aggregation ◽  
Streptococcus Sanguis ◽  
Lag Times ◽  
Bernard Soulier Syndrome

SummaryThe ability of endocarditis and dental strains of Streptococcus sanguis to induce platelet aggregation in plasma (PRP) from normal subjects were examined and compared to responses of PRP with known platelet membrane glycoprotein (GP) and response defects. S. sanguis strains differed in their ability to induce normal PRPs to aggregate. Strains that induced PRP aggregation in more than 60% of donors were significantly faster agonists (mean lag times to onset of aggregation less than 6 min) than those strains inducing response in PRPs of fewer than 60% of donors.Platelets from patients with Bernard-Soulier syndrome aggregated in response to strains of S. sanguis. In contrast, platelets from patients with Glanzmann’s thrombasthenia and from a patient with a specific defect in response to collagen were unresponsive to S. sanguis. These observations show that GPIb and V are not essential, but GPIIb-IIIa and GPIa are important in the platelet response mechanism to S. sanguis. Indeed, the data suggests that the platelet interaction mechanisms of S. sanguis and collagen may be similar.

scholarly journals The implications of lag times between nitrate leaching losses and riverine loads for water quality policy

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
R. W. McDowell ◽  
Z. P. Simpson ◽  
A. G. Ausseil ◽  
Z. Etheridge ◽  
R. Law
Keyword(s):  
Water Quality ◽  
Mean Transit Time ◽  
Lag Time ◽  
Practice Change ◽  
N Leaching ◽  
N Losses ◽  
Leaching Losses ◽  
Nitrate N ◽  
The Mean ◽  
Lag Times

AbstractUnderstanding the lag time between land management and impacts on riverine nitrate–nitrogen (N) loads is critical to understand when action to mitigate nitrate–N leaching losses from the soil profile may start improving water quality. These lags occur due to leaching of nitrate–N through the subsurface (soil and groundwater). Actions to mitigate nitrate–N losses have been mandated in New Zealand policy to start showing improvements in water quality within five years. We estimated annual rates of nitrate–N leaching and annual nitrate–N loads for 77 river catchments from 1990 to 2018. Lag times between these losses and riverine loads were determined for 34 catchments but could not be determined in other catchments because they exhibited little change in nitrate–N leaching losses or loads. Lag times varied from 1 to 12 years according to factors like catchment size (Strahler stream order and altitude) and slope. For eight catchments where additional isotope and modelling data were available, the mean transit time for surface water at baseflow to pass through the catchment was on average 2.1 years less than, and never greater than, the mean lag time for nitrate–N, inferring our lag time estimates were robust. The median lag time for nitrate–N across the 34 catchments was 4.5 years, meaning that nearly half of these catchments wouldn’t exhibit decreases in nitrate–N because of practice change within the five years outlined in policy.

scholarly journals Imaging NAD(H) Redox Alterations in Cryopreserved Alveolar Macrophages from Ozone-Exposed Mice and the Impact of Nutrient Starvation during Long Lag Times

Antioxidants ◽  
2021 ◽  
Vol 10 (5) ◽  
pp. 767
Author(s):  
He N. Xu ◽  
Joanna Floros ◽  
Lin Z. Li ◽  
Shaili Amatya
Keyword(s):  
Oxidative Stress ◽  
Alveolar Macrophages ◽  
Redox State ◽  
Redox Status ◽  
Nutrient Starvation ◽  
Ozone Exposure ◽  
Reduced Form ◽  
Time Period ◽  
Lag Times ◽  
The Impact

Employing the optical redox imaging technique, we previously identified a significant redox shift of nicotinamide adenine dinucleotide (NAD and the reduced form NADH) in freshly isolated alveolar macrophages (AM) from ozone-exposed mice. The goal here was twofold: (a) to determine the NAD(H) redox shift in cryopreserved AM isolated from ozone-exposed mice and (b) to investigate whether there is a difference in the redox status between cryopreserved and freshly isolated AM. We found: (i) AM from ozone-exposed mice were in a more oxidized redox state compared to that from filtered air (FA)-exposed mice, consistent with the results obtained from freshly isolated mouse AM; (ii) under FA exposure, there was no significant NAD(H) redox difference between fresh AM that had been placed on ice for 2.5 h and cryopreserved AM; however, under ozone exposure, fresh AM were more oxidized than cryopreserved AM; (iii) via the use of nutrient starvation and replenishment and H2O2-induced oxidative stress of an AM cell line, we showed that this redox difference between cryopreserved and freshly isolated AM is likely the result of the double “hit”, i.e., the ozone-induced oxidative stress plus nutrient starvation that prevented freshly isolated AM from a full recovery after being on ice for a prolonged time period. The cryopreservation technique we developed eliminates/minimizes the effects of oxidative stress and nutrient starvation on cells. This method can be adopted to preserve lung macrophages from animal models or clinical patients for further investigations.

scholarly journals Fusicoccin (FC)-Induced Rapid Growth, Proton Extrusion and Membrane Potential Changes in Maize (Zea mays L.) Coleoptile Cells: Comparison to Auxin Responses

2021 ◽  
Vol 22 (9) ◽  
pp. 5017
Author(s):  
Małgorzata Polak ◽  
Waldemar Karcz
Keyword(s):  
Membrane Potential ◽  
Rapid Growth ◽  
Proton Pumps ◽  
Proton Extrusion ◽  
Membrane Hyperpolarization ◽  
Fungal Toxin ◽  
Maize Coleoptile ◽  
Lag Times ◽  
Kinetics Of ◽  
Indole 3 Acetic Acid

The fungal toxin fusicoccin (FC) induces rapid cell elongation, proton extrusion and plasma membrane hyperpolarization in maize coleoptile cells. Here, these three parameters were simultaneously measured using non-abraded and non-peeled segments with the incubation medium having access to their lumen. The dose–response curve for the FC-induced growth was sigmoidal shaped with the maximum at 10−6 M over 10 h. The amplitudes of the rapid growth and proton extrusion were significantly higher for FC than those for indole-3-acetic acid (IAA). The differences between the membrane potential changes that were observed in the presence of FC and IAA relate to the permanent membrane hyperpolarization for FC and transient hyperpolarization for IAA. It was also found that the lag times of the rapid growth, proton extrusion and membrane hyperpolarization were shorter for FC compared to IAA. At 30 °C, the biphasic kinetics of the IAA-induced growth rate could be changed into a monophasic (parabolic) one, which is characteristic for FC-induced rapid growth. It has been suggested that the rates of the initial phase of the FC- and IAA-induced growth involve two common mechanisms that consist of the proton pumps and potassium channels whose contribution to the action of both effectors on the rapid growth is different.

Effect of Sodium Nitrite on Growth of Shigella flexneri

1991 ◽  
Vol 54 (6) ◽  
pp. 424-428 ◽  
Author(s):  
LAURA L. ZAIKA ◽  
ANNA H. KIM ◽  
LOUISE FORD
Keyword(s):  
Exponential Growth ◽  
Shigella Flexneri ◽  
Salt Content ◽  
Brain Heart Infusion ◽  
Growth Curves ◽  
Inhibitory Effect ◽  
Plate Count ◽  
Generation Times ◽  
High Salt Content ◽  
Lag Times

A partial factorial design study of the effect of NaNO2 (0, 100, 200, 1000 ppm) in combination with NaCl (0.5, 2.5, 4.0%), pH (7.5, 6.5, 5.5), and temperature (37, 28, 19°C) on growth of Shigella flexneri is reported. Experiments were done aerobically in brain-heart infusion medium, using an inoculum of 1 × 103 CFU/ml. Growth curves were fitted from plate count data by the Gompertz equation; exponential growth rates, lag times, generation times, and maximum populations were derived for all variable combinations. In the absence of nitrite, the organism grew well under all test conditions at 37 and 28°C but did not grow at 19°C at pH 5.5 nor at pH 7.5 with 4% NaCl. Nitrite did not affect growth in media of pH 7.5 at 37 and 28°C. At pH 6.5 growth was inhibited by 1000 ppm NaNO2. The organism failed to grow at 19°C at all nitrite levels in the presence of 2.5 or 4.0% NaCl. The inhibitory effect of nitrite was much greater in media of pH 5.5 and increased with increasing salt levels. More inhibition was apparent at 28 than at 37°C. While lack of growth was used as a paradigm of the effect of nitrite on S. flexneri, nitrite also increased the lag and generation times and decreased the exponential growth rate. Results indicated that NaNO2 in combinations with low temperature, low pH, and high salt content can effectively inhibit the growth of S. flexneri.

Paleomagnetism of the Clam Bank Formation and paleolatitude estimates for western Newfoundland

1993 ◽  
Vol 30 (4) ◽  
pp. 776-786
Author(s):  
G. Murthy ◽  
R. Pätzold
Keyword(s):  
North American ◽  
Early Paleozoic ◽  
The North ◽  
Northerly Direction ◽  
Deformation Event ◽  
Recent Origin ◽  
Component C ◽  
Acadian Orogeny ◽  
North American Craton ◽  
Devonian Age

The Pridolian Clam Bank Formation around Lourdes Cove on the Port au Port Peninsula, western Newfoundland, underwent deformation during the Acadian orogeny. As a result, some of the beds were overturned, but the stratification planes can be accurately determined everywhere. Paleomagnetic studies of the Clam Bank Formation have yielded three well-defined components of magnetization, all acquired subsequent to the deformation event: component A with D = 337.3°, I = −28.3°, (N = 16 sites, k = 25.3, α95 = 7.5°), with a corresponding paleopole at 23.2°N, 145.0°E (dp, dm = 4.5°, 8.2°); component B with D = 172.9°, I = 5.7° (N = 35 specimens, k = 10.2, α95 = 6.4°), with a corresponding paleopole at 38.2°N, 130.1°E (dp, dm = 3.2°, 6.4°); component C with D = 350.4°, I = 69.8° (N = 33 specimens, k = 8.9, α95 = 8.9°). A pre-Mesozoic origin of the A and B components is indicated by the presence of normal and reversed components in specific sites; by the lack of correspondence between the A and B paleopoles and the Mesozoic and later pole positions from the Appalachians and the North American craton; and by agreement with Paleozoic poles from the region. The A component was probably acquired immediately after deformation during the Acadian orogeny. The B component is probably a chemical remanence that was acquired during Permo-Carboniferous (Kiaman) time. The C component is of recent origin, probably acquired in the present Earth's field. Paleomagnetic data from western Newfoundland are used in a localized setting to construct a paleopole sequence and to estimate paleolatitudes for western Newfoundland during the Paleozoic. Keeping in mind the paucity of data for Siluro-Devonian age from this region, western Newfoundland seems to have been at its southernmost position at the end of the Ordovician and to have occupied equatorial latitudes during the Permo-Carboniferous. The paleolatitude trend suggests that this block, which is part of the North American craton, moved in a southerly direction during the early Paleozoic and in a northerly direction during the middle and late Paleozoic.

scholarly journals Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

2021 ◽  
Vol 22 (1) ◽  
Author(s):  
Lingzhan Xue ◽  
Yu Gao ◽  
Meiying Wu ◽  
Tian Tian ◽  
Haiping Fan ◽  
...  
Keyword(s):  
Y Chromosome ◽  
Sex Chromosomes ◽  
Chromosome Pair ◽  
Sex Chromosome ◽  
Structural Variations ◽  
Recombination Suppression ◽  
Chromosome Differentiation ◽  
Y Chromosomes ◽  
Recent Origin ◽  
Mastacembelus Armatus

Abstract Background The origin of sex chromosomes requires the establishment of recombination suppression between the proto-sex chromosomes. In many fish species, the sex chromosome pair is homomorphic with a recent origin, providing species for studying how and why recombination suppression evolved in the initial stages of sex chromosome differentiation, but this requires accurate sequence assembly of the X and Y (or Z and W) chromosomes, which may be difficult if they are recently diverged. Results Here we produce a haplotype-resolved genome assembly of zig-zag eel (Mastacembelus armatus), an aquaculture fish, at the chromosomal scale. The diploid assembly is nearly gap-free, and in most chromosomes, we resolve the centromeric and subtelomeric heterochromatic sequences. In particular, the Y chromosome, including its highly repetitive short arm, has zero gaps. Using resequencing data, we identify a ~7 Mb fully sex-linked region (SLR), spanning the sex chromosome centromere and almost entirely embedded in the pericentromeric heterochromatin. The SLRs on the X and Y chromosomes are almost identical in sequence and gene content, but both are repetitive and heterochromatic, consistent with zero or low recombination. We further identify an HMG-domain containing gene HMGN6 in the SLR as a candidate sex-determining gene that is expressed at the onset of testis development. Conclusions Our study supports the idea that preexisting regions of low recombination, such as pericentromeric regions, can give rise to SLR in the absence of structural variations between the proto-sex chromosomes.

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