Molecular breeding for combating salinity stress in sorghum: progress and prospects.

2021 ◽  
pp. 421-432
Author(s):  
Nidhi Chakma ◽  
Moutoshi Chakraborty ◽  
Salma Bhyan ◽  
Mobashwer Alam
Keyword(s):  
Salt Tolerance ◽  
Marker Assisted Selection ◽  
Molecular Breeding ◽  
Field Conditions ◽  
Salt Tolerant ◽  
Conventional Breeding ◽  
Qtl Validation ◽  
Marker Validation ◽  
Controlled Environments ◽  
Breeding Techniques

Abstract This chapter discusses current progress and prospects of molecular breeding and strategies for developing better saline-tolerant sorghum (Sorghum bicolor) varieties. Most molecular breeding techniques for salt tolerance have been carried out in controlled environments where the plants were not exposed to any variation of the surrounding environment, producing reliable results. Due to the polygenic nature of salt tolerance, the identified quantitative trait loci (QTLs) could be false QTLs. Therefore, QTL validation is important in different plant populations and field conditions. Subsequently, marker validation is important before utilizing marker-assisted selection for screening salt-tolerant plants. Combining molecular breeding with conventional breeding can hasten the development of salt-tolerant sorghum varieties.

scholarly journals Salinity Stress – A Threat to Rice Production Breeding Strategies to Develop Salinity Tolerance in Plants

2021 ◽  
Vol 1 (1) ◽  
pp. 13-17
Author(s):  
Keyword(s):  
Salt Tolerance ◽  
Marker Assisted Selection ◽  
Agricultural Crops ◽  
Breeding Strategies ◽  
Global Level ◽  
Food Crop ◽  
Salt Tolerant ◽  
The World ◽  
Modern Breeding ◽  
Breeding Techniques

Rice is a most staple and demandable food crop of the world which feeds more than half of the world’s overall population. Soil salinity has become a serious problem of the world nowadays which is a common threat to all agricultural crops specially rice because rice is categorized as a typical glycophyte. Salinity is one of the major constraints especially in the coastal areas of the world. This salinity problem can be overcome by conventional and modern breeding technologies. We have focused on the breeding techniques to be adopted to cope with this issue. Salt tolerant varieties can be produced by screening already existing varieties, marker-assisted selection or genetic engineering by introducing salt-tolerance genes. In this review, we have focused salinity problems at global level and its impact on rice as well as other crops plants.

scholarly journals Marker-assisted Backcrossing for Identification of Salt Tolerant Rice Lines

2013 ◽  
Vol 2 (2) ◽  
pp. 1-8 ◽  
Author(s):  
M Moniruzzaman ◽  
MS Islam ◽  
JA Rashid ◽  
SN Begum ◽  
MM Islam
Keyword(s):  
Genetic Diversity ◽  
Salt Tolerance ◽  
Ssr Markers ◽  
Marker Assisted Selection ◽  
Genetic Maps ◽  
Salt Tolerant ◽  
High Yielding Variety ◽  
Marker Assisted Backcrossing ◽  
Tolerant Genotype ◽  
New Cultivars

SSR or microsatellite markers are proved to be ideal for making genetic maps, assisting selection and studying genetic diversity in germplasm. SSR markers are playing important role to identify gene for salt tolerance that can be helpful for plant breeders to develop new cultivars. The experiment was conducted during the period from July 2009 to November 2010 in the experimental field and Biotechnology Laboratory of Plant Breeding Division, Bangladesh Institute of Nuclear Agriculture (BINA), Mymensingh to identify salt tolerant rice line of BC1F1 progenies of Binadhan-5 x FL-478 using SSR markers. Salt tolerant genotype, FL-478 was crossed with high yielding variety, Binadhan-5. Randomly selected 40 BC1F1 progenies along with their two parents (Binadhan-5, FL-478 and F1) were genotyped with microsatellite or SSR markers for identification of salt tolerant rice lines. Parental polymorphism survey was assayed by 10 SSR markers and three polymorphic SSR markers viz., RM 336, RM 510, and RM 585 were selected to evaluate BC1F1 rice lines for salt tolerance. In respect of Primer RM 336, 11 lines were found as salt tolerant and 25 lines were heterozygous and 3 lines were susceptible. Primer RM 510 identified two tolerant, 14 heterozygous and 22 susceptible lines. And primer RM 585 identified 4 lines as tolerant and 35 lines as susceptible. Thus, these markers could be efficiently used in tagging salt tolerant genes, in marker-assisted selection and quantitative trait loci (QTL) mapping. The selected BC1F1 could be used for developing BC2F1 and BC2F2 and mapping genes for salinity tolerance. DOI: http://dx.doi.org/10.3329/ijarit.v2i2.14008 Int. J. Agril. Res. Innov. & Tech. 2 (2): 1-8, December, 2012

scholarly journals Multidimensional Evaluation for Detecting Salt Tolerance of Bread Wheat Genotypes Under Actual Saline Field Growing Conditions

Plants ◽  
2020 ◽  
Vol 9 (10) ◽  
pp. 1324 ◽  
Author(s):  
Elsayed Mansour ◽  
Ehab S. A. Moustafa ◽  
El-Sayed M. Desoky ◽  
Mohamed M. A. Ali ◽  
Mohamed A. T. Yasin ◽  
...  
Keyword(s):  
Salt Tolerance ◽  
Bread Wheat ◽  
Biochemical Parameters ◽  
Soluble Sugar ◽  
Field Conditions ◽  
Antioxidant Enzyme Activities ◽  
Salt Tolerant ◽  
Saline Irrigation ◽  
Wheat Genotypes ◽  
Multidimensional Evaluation

Field-based trials and genotype evaluation until yielding stage are two important steps in improving the salt tolerance of crop genotypes and identifying what parameters can be strong candidates for the better understanding of salt tolerance mechanisms in different genotypes. In this study, the salt tolerance of 18 bread wheat genotypes was evaluated under natural saline field conditions and at three saline irrigation levels (5.25, 8.35, and 11.12 dS m−1) extracted from wells. Multidimensional evaluation for salt tolerance of these genotypes was done using a set of agronomic and physio-biochemical attributes. Based on yield index under three salinity levels, the genotypes were classified into four groups ranging from salt-tolerant to salt-sensitive genotypes. The salt-tolerant genotypes exhibited values of total chlorophyll, gas exchange (net photosynthetic rate, transpiration rate, and stomatal conductance), water relation (relative water content and membrane stability index), nonenzymatic osmolytes (soluble sugar, free proline, and ascorbic acid), antioxidant enzyme activities (superoxide dismutase, catalase, and peroxidase), K+ content, and K+/Na+ ratio that were greater than those of salt-sensitive genotypes. Additionally, the salt-tolerant genotypes consistently exhibited good control of Na+ and Cl− levels and maintained lower contents of malondialdehyde and electrolyte leakage under high salinity level, compared with the salt-sensitive genotypes. Several physio-biochemical parameters showed highly positive associations with grain yield and its components, whereas negative association was observed in other parameters. Accordingly, these physio-biochemical parameters can be used as individual or complementary screening criteria for evaluating salt tolerance and improvement of bread wheat genotypes under natural saline field conditions.

The New Genetics

2019 ◽  
pp. 157-187
Author(s):  
Gordon Conway ◽  
Ousmane Badiane ◽  
Katrin Glatzel
Keyword(s):  
Climate Change ◽  
Tissue Culture ◽  
Nitrogen Fixation ◽  
Molecular Biology ◽  
Dairy Cattle ◽  
Marker Assisted Selection ◽  
Gene Editing ◽  
Recombinant Dna ◽  
Conventional Breeding ◽  
Breeding Techniques

This chapter turns to genetic intensification, which consists of developing crop and livestock crosses that contain genes capable of producing improved yields on a sustainable basis. These crosses often show increased vigor, such that they tend to outperform both parents, although for reasons that are not fully clear. Today, hybrids and crosses are the basis for most improved crop and livestock breeds, including wheat, rice, maize, and dairy cattle. Nevertheless, as has been long recognized, conventional breeding techniques have practical limitations. The application of modern cellular and molecular biology is pursued through four practical techniques: marker-assisted selection, cell and tissue culture, recombinant DNA, and gene editing. The chapter examines the extent to which these interventions contribute to sustainable intensification: improving nutrition, increasing resilience to pests, diseases, and climate change, and improving nitrogen fixation.

Evaluating growth platforms and stress scenarios to assess the salt tolerance of wheat plants

2014 ◽  
Vol 41 (8) ◽  
pp. 860 ◽  
Author(s):  
Harald Hackl ◽  
Yuncai Hu ◽  
Urs Schmidhalter
Keyword(s):  
Drought Stress ◽  
Salt Tolerance ◽  
Interactive Effect ◽  
Field Conditions ◽  
Real Field ◽  
Wheat Cultivars ◽  
Salt Tolerant ◽  
Future Studies ◽  
Field Environment ◽  
Simulated Field

Crops are routinely subjected to a combination of different abiotic stresses. Simplified platforms, stress scenarios and stress protocols are used to study salt tolerance under largely controlled and uniform conditions that are difficult to extrapolate to real arid and semiarid field conditions. To address the latter deficit, this work compares a realistic stress protocol (for salinity alone, drought alone and combined salinity plus drought stress) simulating a field environment in large containers to equivalent results from a more artificial pot environment. The work was based on two wheat cultivars known to differ in their salt tolerance (salt-sensitive Sakha 61 and salt-tolerant Sakha 93). Our results showed that previously established differences in the salt tolerances of the two wheat cultivars were no longer valid when the plants were exposed to a combined stress of salinity plus drought, regardless of the growth platform. Furthermore, in comparing a simulated field root-environment (containers) with pots, our results showed an interactive effect between the different treatments and platforms for both of the investigated cultivars. We conclude that a combined salinity + drought stress scenario and a reliable growth platform are of utmost importance in screening for salt tolerance of spring wheat. In future studies, increased emphasis should be placed on combining salinity with drought stress in well suited platforms to better mimic real field conditions where salinity is present.

Recent advancement of molecular understanding for combating salinity stress in maize.

2021 ◽  
pp. 247-266
Author(s):  
Yi-bo Cao ◽  
Yi-qiao Wang ◽  
Cai-fu Jiang
Keyword(s):  
Salt Tolerance ◽  
Salinity Stress ◽  
Recent Progress ◽  
Molecular Breeding ◽  
Salt Tolerant ◽  
Maize Hybrids ◽  
Fundamental Understanding ◽  
Great Progress ◽  
Recent Advancement

Abstract This chapter reviews recent progress in the fundamental understanding of maize salt tolerance and the advancement of molecular breeding for salt-tolerant maize. Great progress has been made towards the molecular understanding of maize salt tolerance in recent years. Nevertheless, the breeding of commercial salt-tolerant maize hybrids remains challenging. Some issues that may facilitate maize molecular breeding for combating salinity stress are enumerated.

Application of SSR Technique for the Identification of Markers Linked to Salinity Tolerance in Rice

2013 ◽  
Vol 19 (2) ◽  
pp. 57-65
Author(s):  
MH Kabir ◽  
MM Islam ◽  
SN Begum ◽  
AC Manidas
Keyword(s):  
Salt Tolerance ◽  
Ssr Markers ◽  
Salinity Tolerance ◽  
Seedling Stage ◽  
Phenotypic Screening ◽  
Salt Tolerant ◽  
Marker Assisted Breeding ◽  
Hydroponic System ◽  
Rice Landrace ◽  
Salt Susceptible

A cross was made between high yielding salt susceptible BINA variety (Binadhan-5) with salt tolerant rice landrace (Harkuch) to identify salt tolerant rice lines. Thirty six F3 rice lines of Binadhan-5 x Harkuch were tested for salinity tolerance at the seedling stage in hydroponic system using nutrient solution. In F3 population, six lines were found as salt tolerant and 10 lines were moderately tolerant based on phenotypic screening at the seedling stage. Twelve SSR markers were used for parental survey and among them three polymorphic SSR markers viz., OSR34, RM443 and RM169 were selected to evaluate 26 F3 rice lines for salt tolerance. With respect to marker OSR34, 15 lines were identified as salt tolerant, 9 lines were susceptible and 2 lines were heterozygous. While RM443 identified 3 tolerant, 14 susceptible and 9 heterozygous rice lines. Eight tolerant, 11 susceptible and 7 heterozygous lines were identified with the marker RM169. Thus the tested markers could be efficiently used for tagging salt tolerant genes in marker-assisted breeding programme.DOI: http://dx.doi.org/10.3329/pa.v19i2.16929 Progress. Agric. 19(2): 57 - 65, 2008

Genetic Potential for Salt Tolerance During Germination in Lycopersicon Species

HortScience ◽  
1997 ◽  
Vol 32 (2) ◽  
pp. 296-300 ◽  
Author(s):  
M.R. Foolad ◽  
G.Y. Lin
Keyword(s):  
Salt Stress ◽  
Salt Tolerance ◽  
Genotypic Variation ◽  
Control Treatment ◽  
Molar Ratio ◽  
Wild Accession ◽  
Salt Tolerant ◽  
Plant Introductions ◽  
Genetic Potential ◽  
Stress Levels

Seed of 42 wild accessions (Plant Introductions) of Lycopersicon pimpinellifolium Jusl., 11 cultigens (cultivated accessions) of L. esculentum Mill., and three control genotypes [LA716 (a salt-tolerant wild accession of L. pennellii Corr.), PI 174263 (a salt-tolerant cultigen), and UCT5 (a salt-sensitive breeding line)] were evaluated for germination in either 0 mm (control) or 100 mm synthetic sea salt (SSS, Na+/Ca2+ molar ratio equal to 5). Germination time increased in response to salt-stress in all genotypes, however, genotypic variation was observed. One accession of L. pimpinellifolium, LA1578, germinated as rapidly as LA716, and both germinated more rapidly than any other genotype under salt-stress. Ten accessions of L. pimpinellifolium germinated more rapidly than PI 174263 and 35 accessions germinated more rapidly than UCT5 under salt-stress. The results indicate a strong genetic potential for salt tolerance during germination within L. pimpinellifolium. Across genotypes, germination under salt-stress was positively correlated (r = 0.62, P < 0.01) with germination in the control treatment. The stability of germination response at diverse salt-stress levels was determined by evaluating germination of a subset of wild, cultivated accessions and the three control genotypes at 75, 150, and 200 mm SSS. Seeds that germinated rapidly at 75 mm also germinated rapidly at 150 mm salt. A strong correlation (r = 0.90, P < 0.01) existed between the speed of germination at these two salt-stress levels. At 200 mm salt, most accessions (76%) did not reach 50% germination by 38 days, demonstrating limited genetic potential within Lycopersicon for salt tolerance during germination at this high salinity.

scholarly journals Evaluation of salinity tolerance indices in North African barley accessions at reproductive stage

2019 ◽  
Vol 55 (No. 2) ◽  
pp. 61-69 ◽  
Author(s):  
Dorsaf Allel ◽  
Anis BenAmar ◽  
Mounawer Badri ◽  
Chedly Abdelly
Keyword(s):  
Salt Tolerance ◽  
Grain Yield ◽  
Salinity Tolerance ◽  
Selection Criteria ◽  
Reproductive Stage ◽  
Shoot Biomass ◽  
Salt Tolerant ◽  
North African ◽  
Grain Number ◽  
Selection Indices

Soil salinity is one of the main factors limiting cereal productivity in worldwide agriculture. Exploitation of natural variation in local barley germplasm is an effective approach to overcome yield losses. Three gene pools of North African Hordeum vulgare L. grown in Tunisia, Algeria and Egypt were evaluated at the reproductive stage under control and saline conditions. Assessment of stress tolerance was monitored using morphological, yield-related traits and phenological parameters of reproductive organs showing significant genetic variation. High heritability and positive relationships were found suggesting that some traits associated with salt tolerance could be used as selection criteria. The phenotypic correlations revealed that vegetative traits including shoot biomass, tiller number and leaf number along with yield-related traits such as spike number, one spike dry weight, grain number/plant and grain number/spike were highly positively correlated with grain yield under saline conditions. Hence, these traits can be used as reliable selection criteria to improve barley grain yield. Keeping a higher shoot biomass and longer heading and maturity periods as well as privileged filling ability might contribute to higher grain production in barley and thus could be potential target traits in barley crop breeding toward improvement of salinity tolerance. Multiple selection indices revealed that salt tolerance trait index provided a better discrimination of barley landraces allowing selection of highly salt-tolerant and highly productive genotypes under severe salinity level. Effective evaluation of salt tolerance requires an integration of selection indices to successfully identify and characterize salt tolerant lines required for valuable exploitation in the management of salt-affected areas.  

scholarly journals Early Growth Stage Characterization and the Biochemical Responses for Salinity Stress in Tomato

Plants ◽  
2021 ◽  
Vol 10 (4) ◽  
pp. 712
Author(s):  
Md Sarowar Alam ◽  
Mark Tester ◽  
Gabriele Fiene ◽  
Magdi Ali Ahmed Mousa
Keyword(s):  
Salt Tolerance ◽  
Salinity Tolerance ◽  
Salinity Treatment ◽  
Salt Tolerant ◽  
Improvement Program ◽  
Biochemical Basis ◽  
Elevated Salinity ◽  
Tolerance Indices ◽  
Promising Source ◽  
Tomato Genotypes

Salinity is one of the most significant environmental stresses for sustainable crop production in major arable lands of the globe. Thus, we conducted experiments with 27 tomato genotypes to screen for salinity tolerance at seedling stage, which were treated with non-salinized (S1) control (18.2 mM NaCl) and salinized (S2) (200 mM NaCl) irrigation water. In all genotypes, the elevated salinity treatment contributed to a major depression in morphological and physiological characteristics; however, a smaller decrease was found in certain tolerant genotypes. Principal component analyses (PCA) and clustering with percentage reduction in growth parameters and different salt tolerance indices classified the tomato accessions into five key clusters. In particular, the tolerant genotypes were assembled into one cluster. The growth and tolerance indices PCA also showed the order of salt-tolerance of the studied genotypes, where Saniora was the most tolerant genotype and P.Guyu was the most susceptible genotype. To investigate the possible biochemical basis for salt stress tolerance, we further characterized six tomato genotypes with varying levels of salinity tolerance. A higher increase in proline content, and antioxidants activities were observed for the salt-tolerant genotypes in comparison to the susceptible genotypes. Salt-tolerant genotypes identified in this work herald a promising source in the tomato improvement program or for grafting as scions with improved salinity tolerance in tomato.

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