Species diversity and conservation status of marine ornamental fish traded at three market spots in the southern coast of West Java

Conventional identification of marine ornamental fish has faced difficulties due to similar color patterns of closed related species, or juvenile individuals have different color patterns from adult individuals. Molecular barcoding using the cytochrome c oxidase I (COI) gene provides a reliable tool for unmasking such difficulties. This study aimed to barcode marine ornamental fish from the southern coast of West Java. Fragment of the COI gene was sequenced from 54 morphotypes. In this study, we determined the taxonomic status of the samples based on a 5% genetic divergence, with the parameter including sequence percent identity, genetic distance, and length of monophyletic branch in a phylogenetic tree. The result showed that most samples had a high percentage of sequence identities, low genetic distances, and short chapters in monophyletic clades, but the remaining were not. Those data indicated that most samples could be identified at species-level without doubt and support conventional identification. Barcoding success is also depending on the availability of conspecific sequences in the databases. This study concluded that molecular barcoding could strengthen and validate traditional identification.

Download Full-text

Evaluation of conservation and trade status of marine ornamental fish harvested from Pangandaran Coastal Waters, West Java, Indonesia

Biodiversitas Journal of Biological Diversity ◽

10.13057/biodiv/d210212 ◽

2020 ◽

Vol 21 (2) ◽

Author(s):

Agus Nuryanto ◽

DIAN BHAGAWATI ◽

KUSBIYANTO

Keyword(s):

Fish Species ◽

Coastal Waters ◽

Conservation Status ◽

Scientific Data ◽

Ornamental Fish ◽

High Potential ◽

West Java

Abstract. Nuryanto A, Bhagawati D, Kusbiyanto. 2020. Evaluation of conservation and trade status of marine ornamental fish harvested from Pangandaran Coastal Waters, West Java, Indonesia. Biodiversitas 21: 512-520. Pangandaran coastal waters are among the main supply areas of marine ornamental fish in Indonesia. However, no scientific data are available on the conservation and trade status of marine ornamental fish harvested in this region. This study aimed to evaluate the diversity, conservation, and trade status of marine ornamental fish species harvested from Pangandaran coastal waters. Fish were collected during surveys conducted in March, April, July, and September 2019. Species were identified by referring to the available guidance books. The conservation status was analyzed according to the IUCN database, whereas the trade status was evaluated based on the CITES database. A total of 107 marine ornamental fish species from 32 families and eight orders was obtained. The two out of these 107 species had an unresolved conservation status, whereas 24 species were listed as Not Evaluated, 80 species were listed as Least Concern, and one species was listed as Vulnerable by IUCN. Two species had an unknown trade status, whereas 104 species were listed as Not Evaluated and one species was listed in Appendix II of CITES. Our data prove that Pangandaran coastal waters have a high potential for supplying marine ornamental fish, with most of the species listed as having a Not Evaluated or Least Concern status. Most of the species identified were also categorized as having a Not Evaluated trade status.

Download Full-text

Phylogenetic analysis of ornamental Pomacentridae from the southern coast of West Java

DEPIK ◽

10.13170/depik.9.1.14722 ◽

2020 ◽

Vol 9 (1) ◽

pp. 32-43

Author(s):

Munatul Khayah Almusyarofah ◽

Romanus Edy Prabowo ◽

Agus Nuryanto

Keyword(s):

Phylogenetic Analysis ◽

Species Richness ◽

Maximum Parsimony ◽

Sampling Technique ◽

Wide Distribution ◽

Ornamental Fish ◽

Survey Method ◽

Southern Coast ◽

West Java ◽

Basal Group

Abstract. Pomacentridae has a wide distribution in Indonesia waters. Research on species richness of Pomacentridae has been carried out in some areas in Indonesia. However, there are no data about the relationships of Pomacentridae on the southern coast of West Java. This research aims to know the evolutionary kinship of Pomacentridae ornamental fish in Ujung Genteng and Taman Manalusu Beach, West Java. This research used a survey method with a judgment sampling technique. The parameters measured were the consistency index (CI) and character evolution of the resulting phylogenetic tree. Cladogram reconstructed based on maximum parsimony algorithm with 1000 bootstrap replicates in PAUP software. The result showed that the tree had a CI value of 0.6000 which indicated low homoplasy. Pomacentridae formed a monophyletic group when they compared with Chaetodon collare as outgroup. The Pomacentridae clade divided into two subclades. The first subclade consisted of Abudefduf indicus as a basal species, then Neoglypydodon bonang and Plectroglyphidodon lacrymatus have a closed kinship and diverged after Dascyllus trimaculatus, and then Abudefduf notatus and Abudefduf sexfaciatus have a close kinship and diverged after Abudefduf vaigiensis. The second subclade referred to as a basal group, and within this subclade, Chrysiptera brownriggii has a closely related to Chrysiptera unimaculata and diverged after Chromis opercularis.Keywords: Cladistics, damselfish, meristic, morphometric, Pomacentridae

Download Full-text

Keanekaragaman Pari Hasil Tangkapan Nelayan di TPI Karangantu Banten

Jurnal Bioterdidik: Wahana Ekspresi Ilmiah ◽

10.23960/jbt.v9i3.23287 ◽

2021 ◽

Vol 9 (3) ◽

pp. 257-266

Author(s):

Erreull Isyhadu Putri ◽

◽

Dinda Rizqi ◽

Fenia Alya ◽

Tia Azizah

Keyword(s):

Species Diversity ◽

Literature Review ◽

Diversity Index ◽

Conservation Status ◽

Habitat Characteristics ◽

Species Diversity Index ◽

Interview Method

This study aims to determine the diversity of rays caught by fishermen in TPI Karangantu Banten. This research uses interview method and literature review. The discussion of the observations includes classification, habitat, characteristics, and conservation status. The results of this study indicate that there is a diversity of rays, namely the results of the families obtained from the observations are Rhinopteridae, Dasyatidae, and Gymnuridae). From the results of the calculation of the species diversity index using the Shannon Wiener formula, it is included in the medium category. This diversity can be used as knowledge and inventory for biodiversity, especially the chondrichthyes class in TPI Karangantu, Serang, Banten.

Download Full-text

Nighttime behavioral study of flying foxes on the southern coast of West Java, Indonesia

Journal of Veterinary Medical Science ◽

10.1292/jvms.17-0665 ◽

2018 ◽

Vol 80 (7) ◽

pp. 1146-1152 ◽

Cited By ~ 3

Author(s):

Yupadee HENGJAN ◽

Vidi SAPUTRA ◽

Mirsageri MIRSAGERI ◽

Didik PRAMONO ◽

Supratikno KASMONO ◽

...

Keyword(s):

Behavioral Study ◽

Southern Coast ◽

West Java ◽

Flying Foxes

Download Full-text

Avifauna in three vegetation types on Mundanthurai Plateau, South India

Journal of Tropical Ecology ◽

10.1017/s0266467400007999 ◽

1994 ◽

Vol 10 (3) ◽

pp. 323-335 ◽

Cited By ~ 10

Author(s):

A. J. T. Johnsingh ◽

Justus Joshua

Keyword(s):

Species Diversity ◽

South India ◽

Deciduous Forest ◽

Conservation Status ◽

Bird Species ◽

Line Transect ◽

Vegetation Types ◽

Secondary Vegetation ◽

Dry Deciduous Forest ◽

Bird Species Diversity

ABSTRACTPatterns of bird species diversity within three vegetation types were investigated by the line transect method on Mundanthurai Plateau, South India. Minimum numbers of species and individuals were seen in the study area during July and August. Such seasonal variation was more pronounced in riverine and dry deciduous forest than in the secondary vegetation which was avoided by most of the winter migrants. There was a greater species overlap between riverine and dry deciduous forest than between riverine and secondary vegetation.No relationship could be established between bird species diversity and tree species/foliage height diversity. The secondary vegetation had fewer specialized forest species and more generalists. Larger birds (>200 g) were rare but smaller ones (<50 g) were more common. The paper emphasizes that the conservation status of avifauna in managed forests in India needs to be assessed and monitored.

Download Full-text

DIVERSITY OF FERNS (PTERIDOPHYTA) IN THE SEVERAL MOUNTAINS OF WEST JAVA

BIOLINK (Jurnal Biologi Lingkungan Industri Kesehatan) ◽

10.31289/biolink.v7i1.3319 ◽

2020 ◽

Vol 7 (1) ◽

pp. 71-80

Author(s):

Suryana Suryana ◽

Betty Mayawatie ◽

Joko Kusmoro ◽

Budi Irawan

Keyword(s):

Species Diversity ◽

Descriptive Analysis ◽

Method Comparison ◽

Similarity Index ◽

Analysis Method ◽

West Java ◽

Fern Species ◽

Species Similarity

The diversity of ferns (Pteridophyta) in the five mountainous in West Java (Mt. of Patuha, Papandayan, Tangkuban Perahu, Pangrango, and Guntur) has not been widely reported. The aim of this research was to obtain data on diversity and similarity of fern species in the five mountains in West Java. This research was conducted by exploring and descriptive analysis method. Comparison of species diversity among all reseach field were calculated by the index of species similarity according to Sorenson. The diversity of ferns in Mt. Patuha, Papandayan, Tangkuban Perahu, Pangrango, and Guntur were 27, 14, 26, 40 and 5 species, respectively. The total number of ferns species in five locations are 83 species from 25 families. Comparison of species diversity among fileds based on the Sorenson similarity index is low (<50%), except between the Mt. Patuha and Mt. Papandayan areas is high (> 50%).

Download Full-text

FAUNA IKAN AIR TAWAR DI PERAIRAN KAWASAN GUNUNG SAWAL, JAWA BARAT, INDONESIA

BERITA BIOLOGI ◽

10.14203/beritabiologi.v16i2.2186 ◽

2017 ◽

Vol 16 (2) ◽

Cited By ~ 1

Author(s):

Haryono Haryono

Keyword(s):

Introduced Species ◽

Common Species ◽

Ornamental Fish ◽

Mountain Region ◽

Fish Diversity ◽

Species Status ◽

West Java ◽

Forest Condition

This study aimed to assess fish diversity and its related aspects in the Sawal Mountain Region, the watershed Citanduy in Ciamis, West Java, Indonesia. The study was conducted by grouping into four zones based on forest condition and the order of the river. The fisheswere sampled by using elektrofishing. This study recorded 12 species which Barbodes binotatus is the most abundant and widely local distributed, i.e. 20.09 individu/station and occupied 78.60 % of the area. Based on species status, as much as 75% species have wide geography distribution (common species) and the rest was introduced species. As much as 50% (6 species) have the potency as consumption fish, 25% (3 species) as ornamental fish, 17% (2 species) both as ornamental and consumption, and 8% (1 species) is stil unknown for the benefit.

Download Full-text

The alien freshwater fish of Mount Galunggung, West Java, Indonesia

Biodiversitas Journal of Biological Diversity ◽

10.13057/biodiv/d210419 ◽

2020 ◽

Vol 21 (4) ◽

Author(s):

Haryono Haryono ◽

Gema Wahyudewantoro

Keyword(s):

Freshwater Fish ◽

Poecilia Reticulata ◽

Active Volcano ◽

Ornamental Fish ◽

Survey Method ◽

Fish Diversity ◽

Local Distribution ◽

Introduced Fish ◽

West Java ◽

Alien Fish

Abstract. Haryono, Wahyudewantoro G. 2020. The alien freshwater fish of Mount Galunggung, West Java, Indonesia. Biodiversitas 21: 1401-1408. Mt. Galunggung, located in West Java, Indonesia, is an active volcano renowned for its deadly eruption in 1982. This area has many waters bodies, but the fish communities have not been recorded, especially the alien or introduced fish species. Hence, the objective of the present study was to determine the alien fish diversity, abundance, local distribution and utilization in Galunggung vicinity. The study was done in March 2013 using survey method covering 10 stations. Fish sampling was based on catch per unit of effort (CPUE) using mainly electrofishing, gillnet and cast net. A total of 24 species were recorded during the survey, in which 13 were listed as introduced species. Poecilia reticulata was the dominant species with 7.4 ind./St and followed by Xiphophorus helleri with 5.3 ind./St. Both species were also widely distributed on the sites with 70% local distribution. The alien species in this area are mostly used for ornamental fish.

Download Full-text

Diversification of African Tree Legumes in Miombo–Mopane Woodlands

Plants ◽

10.3390/plants8060182 ◽

2019 ◽

Vol 8 (6) ◽

pp. 182 ◽

Cited By ~ 3

Author(s):

Ivete Maquia ◽

Silvia Catarino ◽

Ana R. Pena ◽

Denise R.A. Brito ◽

Natasha. S. Ribeiro ◽

...

Keyword(s):

Species Diversity ◽

Plant Diversity ◽

Evolutionary History ◽

Phylogenetic Analyses ◽

Conservation Status ◽

Conservation Areas ◽

Future Studies ◽

Tree Legumes ◽

Key Species ◽

History Of

The southern African Miombo and Mopane ecoregions constitute a unique repository of plant diversity whose diversification and evolutionary history is still understudied. In this work, we assessed the diversity, distribution, and conservation status of Miombo and Mopane tree legumes within the Zambezian phytoregion. Data were retrieved from several plant and gene databases and phylogenetic analyses were performed based on genetic barcodes. Seventy-eight species (74 from Miombo and 23 from Mopane, 19 common to both ecoregions) have been scored. Species diversity was high within both ecoregions, but information about the actual conservation status is scarce and available only for ca. 15% of the species. Results of phylogenetic analyses were consistent with current legume classification but did not allow us to draw any conclusion regarding the evolutionary history of Miombo and Mopane tree legumes. Future studies are proposed to dissect the diversity and structure of key species in order to consolidate the network of conservation areas.

Download Full-text