scholarly journals GENETIC DIFFERENTIATION BETWEEN GEOGRAPHICALLY DISTANT POPULATIONS OF DROSOPHILA MELANOGASTER

Genetics ◽  
1982 ◽  
Vol 101 (2) ◽  
pp. 235-256
Author(s):  
Rama S Singh ◽  
Donal A Hickey ◽  
Jean David
Keyword(s):  
Drosophila Melanogaster ◽  
Genetic Differentiation ◽  
Gene Frequency ◽  
Natural Populations ◽  
Allozyme Variation ◽  
Clinal Variation ◽  
Significant Genetic Differentiation ◽  
African Populations ◽  
Latitudinal Clines ◽  
North And South

ABSTRACT We have studied allozyme variation at 26 gene loci in nine populations of Drosophila melanogaster originating on five different continents. The distant populations show significant genetic differentiation. However, only half of the loci studied have contributed to this differentiation; the other half show identical patterns in all populations. The genetic differentiation in North American, European and African populations is correlated with the major climatic differences between north and south. These differences arise mainly from seven loci that show gene-frequency patterns suggestive of latitudinal clines in allele frequencies. The clinal variation is such that subtropical populations are more heterozygous than temperate populations. These results are discussed in relation to the selectionist and neutralist hypotheses of genetic variation in natural populations.

Estimates of gene flow from rare alleles in natural populations of medfly Ceratitis capitata (Diptera: Tephritidae)

2004 ◽  
Vol 94 (5) ◽  
pp. 449-456 ◽  
Author(s):  
A. Kourti
Keyword(s):  
Gene Flow ◽  
Ceratitis Capitata ◽  
Natural Populations ◽  
Clinal Variation ◽  
African Populations ◽  
The World ◽  
Rare Alleles ◽  
Geographical Populations ◽  
Latitudinal Clines ◽  
North And South

AbstractGene flow based on the spatial distribution of rare alleles at 25 gene loci was estimated in 15 populations of Ceratitis capitata (Wiedemann) from different parts of the world. Estimates of Nm, the number of migrants exchanged per generation among populations in different regions of the world, appeared to be quite similar, ranging from 3.36 in tropical Africa to 2.94 in the New World and 2.72 in Mediterranean basin populations. This suggests that gene flow among neighbouring populations of medfly is quite extensive. The genetic differentiation in American, Mediterranean and African populations was related to major climatic differences between North and South. These differences arise mainly from five loci that showed gene frequency patterns suggestive of latitudinal clines in allele frequencies. The clinal variation was such that tropical-subtropical populations were more heterozygous than temperate populations. It was concluded that gene flow, counteracting the forces of natural selection and genetic drift, determines the extent to which geographical populations of C. capitata are differentiated.

scholarly journals Comparative population structuring of molecular and allozyme variation of Drosophila melanogaster Adh between Europe, West Africa and East Africa

1995 ◽  
Vol 65 (2) ◽  
pp. 95-103 ◽  
Author(s):  
Véronique Bénassi ◽  
Michel Veuille
Keyword(s):  
Drosophila Melanogaster ◽  
West Africa ◽  
East Africa ◽  
Natural Populations ◽  
Allozyme Variation ◽  
East African ◽  
Three Samples ◽  
African Populations ◽  
Population Structuring ◽  
Two Populations

SummaryRestriction enzyme molecular variation in Drosophila melanogaster Adh was compared between three natural populations from Europe, West Africa and East Africa. The frequency distribution of silent variation in the slow allele was compatible with the neutral model in all three samples. The number of haplotypes in East Africa was significantly higher than in the other two populations. The largest divergence, as measured by Fst, was between the East African population and a group made up from the West African, the European, and previously studied American populations. We suggest that a split first occurred within African populations at least 44000 years ago. European populations separated from West Africa more recently, between the last glacial maximum and the post-glacial optimum, 18000 to 8000 years ago. We suggest that this species was domesticated recently relative to human evolution, possibly with the advent of agriculture. Population differentiation with respect to the two allozymes, fast and slow, does not follow the geographical pattern of silent variation. It opposes European to both African populations, and probably results from selection for adaptation to alcohol in recent temperate populations.

Genetic differentiation and inversion clines in Indian natural populations of Drosophila melanogaster

Genome ◽  
1991 ◽  
Vol 34 (4) ◽  
pp. 618-625 ◽  
Author(s):  
Aparup Das ◽  
B. N. Singh
Keyword(s):  
Drosophila Melanogaster ◽  
Genetic Differentiation ◽  
Natural Populations ◽  
The South ◽  
The North ◽  
Chromosome Inversions ◽  
The Difference ◽  
And Inversion ◽  
First Time ◽  
North And South

To study the genetic differentiation and inversion clines in Indian natural populations of Drosophila melanogaster, 14 natural populations (6 from the north and 8 from the south) were screened for chromosome inversions. The chromosomal analysis revealed the presence of 23 paracentric inversions, which include 4 common cosmopolitan, 4 rare cosmopolitan, 2 recurrent endemic, and 13 unique endemic (new inversions detected for the first time) inversions. The difference in karyotype frequencies between populations from the north and south were highly significant and the level of inversion heterozygosity was higher in populations from the south. Statistically significant negative correlations were found between each of the four common cosmopolitan inversions and latitude. These findings are in accord with results from other worldwide geographic regions and show that Indian populations of D. melanogaster have undergone considerable genetic differentiation at the level of inversion polymorphism.Key words: Drosophila melanogaster, Indian natural populations, chromosome inversions, genetic differentiation, north–south clines.

scholarly journals STUDIES OF ESTERASE-6 IN DROSOPHILA MELANOGASTER. II. THE GENETICS AND FREQUENCY DISTRIBUTIONS OF NATURALLY OCCURRING VARIANTS STUDIED BY ELECTROPHORETIC AND HEAT STABILITY CRITERIA

Genetics ◽  
1979 ◽  
Vol 93 (2) ◽  
pp. 461-478 ◽  
Author(s):  
Bruce J Cochrane ◽  
Rollin C Richmond
Keyword(s):  
Drosophila Melanogaster ◽  
Gene Frequency ◽  
Allelic Variation ◽  
Natural Populations ◽  
Heat Stability ◽  
Allozyme Variation ◽  
Frequency Distributions ◽  
Naturally Occurring ◽  
Esterase 6 ◽  
Different Populations

ABSTRACT Measurements of the electrophoretic mobility and thermostability of esterase-6 allozymes have been used to determine the amount of allelic variation at the esterase-6 locus in Drosophila melanogaster. We studied 39.8 homozygous lines obtained from four natural populations. Use of a spectro-photometric assay for esterase-6 activity has allowed precise quantitation of heat-stability variants. Using these methods, eight putative alleles were detected within the two most common electrophoretic classes. Analyses of F1 and F2 progeny show that the behavior of stability variants is consistent with the hypothesis that this variation is due to allelic variation at the Est-6 locus. Analyses of the gene-frequency distributions within and between populations show (1) that observed allele-frequency distributions do not deviate significantly from those expected for neutral variants, and (2) that there is little evidence for an increase in apparent divergence of the different populations at the genotypic o r phenotypic levels when the additional variation detected is considered. These findings suggest that gene-frequency analysis alone is unlikely to resolve the question of the selective significance of allozyme variation.

scholarly journals Accumulation of P elements in minority inversions in natural populations of Drosophila melanogaster

1992 ◽  
Vol 59 (1) ◽  
pp. 1-9 ◽  
Author(s):  
Walter F. Eanes ◽  
Cedric Wesley ◽  
Brian Charlesworth
Keyword(s):  
Mathematical Model ◽  
Drosophila Melanogaster ◽  
Copy Number ◽  
Natural Populations ◽  
P Element ◽  
P Elements ◽  
Chromosomal Inversions ◽  
Associated Production ◽  
African Populations ◽  
Parameter Values

SummaryThe accumulation of a transposable element inside chromosomal inversions is examined theoretically by a mathematical model, and empirically by counts of P elements associated with inversion polymorphisms in natural populations of Drosophila melanogaster. The model demonstrates that, if heterozygosity for an inversion effectively reduces element associated production of detrimental chromosome rearrangements, a differential accumulation of elements is expected, with increased copy number inside the minority inversion. Several-fold differential accumulations are possible with certain parameter values. We present data on P element counts for inversion polymorphisms on all five chromosome arms of 157 haploid genomes from two African populations. Our observations show significantly increased numbers of elements within the regions associated with the least common, or minority arrangements, in natural inversion polymorphisms.

scholarly journals Low but significant genetic differentiation underlies biologically meaningful phenotypic divergence in a large Atlantic salmon population

2015 ◽  
Author(s):  
Tutku Aykanat ◽  
Susan E Johnston ◽  
Panu Orell ◽  
Eero Niemelä ◽  
Jaakko Erkinaro ◽  
...  
Keyword(s):  
Life History ◽  
Genetic Differentiation ◽  
Atlantic Salmon ◽  
Genetic Divergence ◽  
Natural Populations ◽  
Structured Populations ◽  
Life History Strategies ◽  
Adaptive Divergence ◽  
Juvenile Growth ◽  
Significant Genetic Differentiation

Despite decades of research assessing the genetic structure of natural populations, the biological meaning of low yet significant genetic divergence often remains unclear due to a lack of associated phenotypic and ecological information. At the same time, structured populations with low genetic divergence and overlapping boundaries can potentially provide excellent models to study adaptation and reproductive isolation in cases where high resolution genetic markers and relevant phenotypic and life history information are available. Here, we combined SNP-based population inference with extensive phenotypic and life history data to identify potential biological mechanisms driving fine scale sub-population differentiation in Atlantic salmon (Salmo salar) from the Teno River, a major salmon river in Europe. Two sympatrically occurring sub-populations had low but significant genetic differentiation (FST = 0.018) and displayed marked differences in the distribution of life history strategies, including variation in juvenile growth rate, age at maturity and size within age classes. Large, late-maturing individuals were virtually absent from one of the two sub-populations and there were significant differences in juvenile growth rates and size-at-age after oceanic migration between individuals in the respective sub-populations. Our findings suggest that different evolutionary processes affect each sub-population and that hybridization and subsequent selection may maintain low genetic differentiation without hindering adaptive divergence.

scholarly journals CHROMOSOME INVERSION POLYMORPHISMS IN DROSOPHILA MELANOGASTER. I. LATITUDINAL CLINES AND ASSOCIATIONS BETWEEN INVERSIONS IN AUSTRALASIAN POPULATIONS

Genetics ◽  
1981 ◽  
Vol 98 (4) ◽  
pp. 833-847
Author(s):  
W R Knibb ◽  
J G Oakeshott ◽  
J B Gibson
Keyword(s):  
Drosophila Melanogaster ◽  
Southern Hemisphere ◽  
Northern Hemisphere ◽  
Natural Populations ◽  
Chromosome Inversion ◽  
Latitudinal Clines ◽  
The Common

ABSTRACT Nineteen Australasian populations of Drosophila melanogaster have been screened for chromosome inversion polymorphisms. All 15 of the inversion types found are paracentric and autosomal, but only four of these, one on each of the major autosome arms, are common and cosmopolitan. North-south clines occur, with the frequencies of all four of the common cosmopolitan inversions increasing toward the equator. These clines in the Southern Hemisphere mirror north-south clines in the Northern Hemisphere, where the frequencies of all four of the common cosmopolitan inversions again increase towards the equator.—While few of the Australasian populations show significant disequilibrium between linked common cosmopolitan inversions, those that do invariably have excesses of coupling gametes, which is consistent with other reports. We also find nonrandom associations between the two major autosomes, with the northern populations in Australasia (those with high inversion frequencies) tending to be deficient in gametes with common cosmopolitan inversions on both major autosomes, while the southern populations in Australasia (low inversion frequencies) tend to have an excess of this class of gametes.—The clines and the nonrandom associations between the two major autosomes are best interpreted in terms of selection operating to maintain the common cosmopolitan inversion polymorphisms in natural populations of D. melanogaster.

scholarly journals Early split between African and European populations of Drosophila melanogaster

2018 ◽  
Author(s):  
Adamandia Kapopoulou ◽  
Martin Kapun ◽  
Pavlos Pavlidis ◽  
Bjorn Pieper ◽  
Ricardo Wilches ◽  
...  
Keyword(s):  
Drosophila Melanogaster ◽  
Natural Populations ◽  
Divergence Time ◽  
Fruit Fly ◽  
European Population ◽  
Genetic Admixture ◽  
Demographic Models ◽  
African Populations ◽  
Adaptive Processes ◽  
European Populations

AbstractNatural populations of the fruit fly Drosophila melanogaster have been used extensively as a model system to investigate the effect of neutral and selective processes on genetic variation. The species expanded outside its Afrotropical ancestral range during the last glacial period and numerous studies have focused on identifying molecular adaptations associated with the colonization of northern habitats. The sequencing of many genomes from African and non-African natural populations has facilitated the analysis of the interplay between adaptive and demographic processes. However, most of the non-African sequenced material has been sampled from American and Australian populations that have been introduced within the last hundred years following recent human dispersal and are also affected by recent genetic admixture with African populations. Northern European populations, at the contrary, are expected to be older and less affected by complex admixture patterns and are therefore more appropriate to investigate neutral and adaptive processes. Here we present a new dataset consisting of 14 fully sequenced haploid genomes sampled from a natural population in Umeå, Sweden. We co-analyzed this new data with an African population to compare the likelihood of several competing demographic scenarios for European and African populations. We show that allowing for gene flow between populations in neutral demographic models leads to a significantly better fit to the data and strongly affects estimates of the divergence time and of the size of the bottleneck in the European population. Our results indicate that the time of divergence between cosmopolitan and ancestral populations is 30,000 years older than reported by previous studies.

scholarly journals Demographic analyses of a new sample of haploid genomes from a Swedish population of Drosophila melanogaster

2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Adamandia Kapopoulou ◽  
Martin Kapun ◽  
Bjorn Pieper ◽  
Pavlos Pavlidis ◽  
Ricardo Wilches ◽  
...  
Keyword(s):  
Drosophila Melanogaster ◽  
Genetic Variation ◽  
Gene Flow ◽  
Natural Populations ◽  
Swedish Population ◽  
Demographic Models ◽  
African Populations ◽  
Variation Data ◽  
Adaptive Processes ◽  
Northern Species

AbstractEuropean and African natural populations of Drosophila melanogaster have been the focus of several studies aiming at inferring demographic and adaptive processes based on genetic variation data. However, in these analyses little attention has been given to gene flow between African and European samples. Here we present a dataset consisting of 14 fully sequenced haploid genomes sampled from a natural population from the northern species range (Umeå, Sweden). We co-analyzed this new data with an African population to compare the likelihood of several competing demographic scenarios for European and African populations and show that gene flow improves the fit of demographic models to data.

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