Effects of Relaxed Natural Selection on the Evolution of Behavior

Author(s):  
Richard G. Coss

Theoretical discussion of the role of natural selection in shaping behavioral variation in different habitats has been an integral part of the study of animal behavior since the late 19th century. Herbert Spencer (1888) was among the first to argue that migrating populations that fail to adjust to environmental circumstances “are the first to disappear.” A common rationale for comparing populations or related species is the desire to identify behavioral differences that correspond with habitat properties providing different patterns of selection (Tuomi 1981, Riechert 1993, this volume). Behavioral similarities are often ignored or are treated as less interesting because the thrust of the research program emphasizes behavioral differences as an empirical test of the theory of natural selection. Nevertheless, these similarities can be as revealing of evolutionary process as are differences when they reflect behavioral convergence or slow disintegration of behavior under relaxed selection (Coss and Goldthwaite 1995). When populations invade novel habitats, they not only experience new selective regimes; they can also experience relaxed selection on specific behavioral phenotypes. This is particularly common when the new habitat is missing a class of predators that was abundant in the ancestral habitat (e.g., Curio 1975, Pressley 1981). Under relaxed selection, characters may disintegrate, presumably because mutations that result in loss of the phenotype are not at a selective disadvantage. Disintegration is not always observed, however. Instead, behavioral characters are sometimes retained for long periods of time after selection has been relaxed (Coss 1991b, Kaneshiro 1989). Inferring relaxed selection requires that the history of the contrasted populations be relatively well known. Both ancestral selective regimes and behavioral characters must be known if character polarity is to be established. Character polarity must be established to distinguish disintegration from parallel evolution of novel behavior patterns. This often is a problem in population contrasts because differentiation is usually too recent to have resulted in the evolution of enough derived characters for the use of standard cladistic methods of phylogenetic reconstruction, although recent advances in statistical and molecular techniques are promising (Foster 1994, Foster and Cameron 1996). Instead, inference of character polarity has typically relied on geological evidence and comparison with closely related species.

2016 ◽  
Author(s):  
Galya V. Klink ◽  
Georgii A. Bazykin

AbstractAmino acid propensities at amino acid sites change with time due to epistatic interactions or changing environment, affecting the probabilities of fixation of different amino acids. Such changes should lead to an increased rate of homoplasies (reversals, parallelisms, and convergences) at closely related species. Here, we reconstruct the phylogeny of twelve mitochondrial proteins from several thousand metazoan species, and measure the phylogenetic distances between branches at which either the same allele originated repeatedly due to homoplasies, or different alleles originated due to divergent substitutions. The mean phylogenetic distance between parallel substitutions is ∼20% lower than the mean phylogenetic distance between divergent substitutions, indicating that a variant fixed in a species is more likely to be deleterious in a more phylogenetically remote species, compared to a more closely related species. These findings are robust to artefacts of phylogenetic reconstruction or of pooling of sites from different conservation classes or functional groups, and imply that single-position fitness landscapes change at rates similar to rates of amino acid changes.


Paleobiology ◽  
1981 ◽  
Vol 7 (4) ◽  
pp. 456-468 ◽  
Author(s):  
Joel Cracraft

Systematics and paleontology have had a long conceptual relationship, united by the common goal of reconstructing the history of life. Yet, with few exceptions, paleontologists have had little input into formulating systematic theory and methodology. The reasons for this apparently relate to two conceptual-philosophical traditions of post-Darwinian paleontology: (1) the widespread adoption of a species concept in which taxa are viewed as nondiscrete, arbitrarily designated segments of evolutionary continua, and (2) the belief that phylogenetic reconstruction is primarily an empirical matter of tracing evolutionary change through the stratigraphic record.Available systematic evidence supports the hypothesis that species are real, discrete units in space and time and that, unless they are postulated to be directly ancestral to another species, they can be defined by the possession of one or more evolutionary novelties (derived characters). Species beginnings are delineated by speciation (vicariance) events and their terminations by subsequent speciation events or by extinctions.Natural groups are composed of taxa that have shared a common genealogical history. Cladistic analysis is a method to construct and test hypotheses of monophyly and thereby define natural groups. Cladistic hypotheses are necessary to investigate many of the major questions within contemporary paleobiology. Virtually no studies of evolutionary rates, patterns of taxonomic diversity, modes of taxic evolution, and patterns of morphological diversification can be undertaken without reference to cladistic hypotheses about the composition of natural groups.Because paleobiology is historical in its content, paleontologists are greatly limited in their ability to use paleontological data to investigate questions about the evolutionary process. According to current evolutionary theory, the concepts of adaptation and natural selection relate to genetic and ecological processes that take place within local populations (microevolution). If so, then data relevant to examining these phenomena are likely to be lacking in paleontological samples. Consequently, explanations of paleontological pattern that include process-related concepts such as adaptation and natural selection are axiomatic in their logical structure and thus cannot be falsified or critically evaluated by that paleontological pattern.


2018 ◽  
Vol 44 (1) ◽  
pp. 20
Author(s):  
Eloiza Teles Caldart ◽  
Helena Mata ◽  
Cláudio Wageck Canal ◽  
Ana Paula Ravazzolo

Background: Phylogenetic analyses are an essential part in the exploratory assessment of nucleic acid and amino acid sequences. Particularly in virology, they are able to delineate the evolution and epidemiology of disease etiologic agents and/or the evolutionary path of their hosts. The objective of this review is to help researchers who want to use phylogenetic analyses as a tool in virology and molecular epidemiology studies, presenting the most commonly used methodologies, describing the importance of the different techniques, their peculiar vocabulary and some examples of their use in virology.Review: This article starts presenting basic concepts of molecular epidemiology and molecular evolution, emphasizing their relevance in the context of viral infectious diseases. It presents a session on the vocabulary relevant to the subject, bringing readers to a minimum level of knowledge needed throughout this literature review. Within its main subject, the text explains what a molecular phylogenetic analysis is, starting from a multiple alignment of nucleotide or amino acid sequences. The different software used to perform multiple alignments may apply different algorithms. To build a phylogeny based on amino acid or nucleotide sequences it is necessary to produce a data matrix based on a model for nucleotide or amino acid replacement, also called evolutionary model. There are a number of evolutionary models available, varying in complexity according to the number of parameters (transition, transversion, GC content, nucleotide position in the codon, among others). Some papers presented herein provide techniques that can be used to choose evolutionary models. After the model is chosen, the next step is to opt for a phylogenetic reconstruction method that best fits the available data and the selected model. Here we present the most common reconstruction methods currently used, describing their principles, advantages and disadvantages. Distance methods, for example, are simpler and faster, however, they do not provide reliable estimations when the sequences are highly divergent. The accuracy of the analysis with probabilistic models (neighbour joining, maximum likelihood and bayesian inference) strongly depends on the adherence of the actual data to the chosen development model. Finally, we also explore topology confidence tests, especially the most used one, the bootstrap. To assist the reader, this review presents figures to explain specific situations discussed in the text and numerous examples of previously published scientific articles in virology that demonstrate the importance of the techniques discussed herein, as well as their judicious use.Conclusion: The DNA sequence is not only a record of phylogeny and divergence times, but also keeps signs of how the evolutionary process has shaped its history and also the elapsed time in the evolutionary process of the population. Analyses of genomic sequences by molecular phylogeny have demonstrated a broad spectrum of applications. It is important to note that for the different available data and different purposes of phylogenies, reconstruction methods and evolutionary models should be wisely chosen. This review provides theoretical basis for the choice of evolutionary models and phylogenetic reconstruction methods best suited to each situation. In addition, it presents examples of diverse applications of molecular phylogeny in virology.


2014 ◽  
Vol 80 (17) ◽  
pp. 5503-5514 ◽  
Author(s):  
Christophe Habib ◽  
Armel Houel ◽  
Aurélie Lunazzi ◽  
Jean-François Bernardet ◽  
Anne Berit Olsen ◽  
...  

ABSTRACTThe genusTenacibaculum, a member of the familyFlavobacteriaceae, is an abundant component of marine bacterial ecosystems that also hosts several fish pathogens, some of which are of serious concern for marine aquaculture. Here, we applied multilocus sequence analysis (MLSA) to 114 representatives of most known species in the genus and of the worldwide diversity of the major fish pathogenTenacibaculum maritimum. Recombination hampers precise phylogenetic reconstruction, but the data indicate intertwined environmental and pathogenic lineages, which suggests that pathogenicity evolved independently in several species. At lower phylogenetic levels recombination is also important, and the speciesT. maritimumconstitutes a cohesive group of isolates. Importantly, the data reveal no trace of long-distance dissemination that could be linked to international fish movements. Instead, the high number of distinct genotypes suggests an endemic distribution of strains. The MLSA scheme and the data described in this study will help in monitoringTenacibaculuminfections in marine aquaculture; we show, for instance, that isolates from tenacibaculosis outbreaks in Norwegian salmon farms are related toT. dicentrarchi, a recently described species.


2016 ◽  
Vol 44 (4) ◽  
pp. 1101-1110 ◽  
Author(s):  
Alistair V.W. Nunn ◽  
Geoffrey W. Guy ◽  
Jimmy D. Bell

A sufficiently complex set of molecules, if subject to perturbation, will self-organize and show emergent behaviour. If such a system can take on information it will become subject to natural selection. This could explain how self-replicating molecules evolved into life and how intelligence arose. A pivotal step in this evolutionary process was of course the emergence of the eukaryote and the advent of the mitochondrion, which both enhanced energy production per cell and increased the ability to process, store and utilize information. Recent research suggest that from its inception life embraced quantum effects such as ‘tunnelling’ and ‘coherence’ while competition and stressful conditions provided a constant driver for natural selection. We believe that the biphasic adaptive response to stress described by hormesis–a process that captures information to enable adaptability, is central to this whole process. Critically, hormesis could improve mitochondrial quantum efficiency, improving the ATP/ROS ratio, whereas inflammation, which is tightly associated with the aging process, might do the opposite. This all suggests that to achieve optimal health and healthy aging, one has to sufficiently stress the system to ensure peak mitochondrial function, which itself could reflect selection of optimum efficiency at the quantum level.


2020 ◽  
Vol 8 (2) ◽  
pp. 262
Author(s):  
Febrytha Nur Azizah ◽  
I Putu Anom

Agro-tourism is an alternative tourism activity that relies on plantations and agriculture as its main attraction. Along with the development of tourism, agro-tourism has now become an economic driving commodity for the surrounding community, so that agro-tourism is increasingly taken into account in the world of tourism. The development of an agro-tourism can not be separated from the evolutionary process that occurs through various stages of the beginning of the tourist attraction built until now. This study aims to determine the evolution of developments in Satria Agrowisata. The research method used is descriptive qualitative by conducting data collection techniques through online interview as primary data, and conducting online observations as secondary data. The results show that Satria Agrowisata can adapt well to the various changes that exist and continue to innovate in order to survive in the world of tourism until now. In Darwin's theory of evolution, he put forward two key words in his theory, natural selection and adaptation. Natural selection as a mechanism for evolutionary change, and adaptations that occur in its development over time.   Keyword: Evolution, Agrotourism, Satria Agrowisata, Bali.


2021 ◽  
pp. 1-18
Author(s):  
Lesley Newson ◽  
Peter J. Richerson

This introductory chapter explains why a new story of human evolution is needed, and also lays the foundations of the story told in this book. One of the reasons we need a new story is that previous stories have concentrated on what our male ancestors were doing. Since survival is most at risk in the first years of life, it makes much more sense to concentrate on children and their mothers than on adult males. A brief account of the history of ideas in evolution by natural selection and human evolution provides readers with a background in evolutionary processes. Humans are a product of evolution, but we are not like other animals, because we are connected and readily share complex information. We are unique and our evolution was the result of a unique evolutionary process. To understand ourselves in evolutionary terms, it’s necessary to consider two intertwined evolutionary processes—genes and culture.


Author(s):  
Tim S. Gray

Herbert Spencer is chiefly remembered for his classical liberalism and his evolutionary theory. His fame was considerable during the mid- to late-nineteenth century, especially in the USA, which he visited in 1882 to be lionized by New York society as the prophetic philosopher of capitalism. In Britain, however, Spencer’s reputation suffered two fatal blows towards the end of his life. First, collectivist legislation was introduced to protect citizens from the ravages of the industrial revolution, and Spencer’s spirited defence of economic laissez-faire became discredited. Second, his evolutionary theory, which was based largely on the Lamarckian principle of the inheritance of organic modifications produced by use and disuse, was superseded by Darwin’s theory of natural selection. Nearly a century after his death, however, there is renewed interest in his ideas, partly because the world has become more sympathetic to market philosophies, and partly because the application of evolutionary principles to human society has become fashionable once more.


Author(s):  
Samir Okasha

In a standard Darwinian explanation, natural selection takes place at the level of the individual organism, i.e. some organisms enjoy a survival or reproduction advantage over others, which results in evolutionary change. In principle however, natural selection could operate at other hierarchical levels too, above and below that of the organism, for example the level of genes, cells, groups, colonies or even whole species. This possibility gives rise to the ‘levels of selection’ question in evolutionary biology. Group and colony-level selection have been proposed, originally by Darwin, as a means by which altruism can evolve. (In biology, ‘altruism’ refers to behaviour which entails a fitness cost to the individual so behaving, but benefits others.) Though this idea is still alive today, many theorists regard kin selection as a superior explanation for the existence of altruism. Kin selection arises from the fact that relatives share genes, so if an organism behaves altruistically towards its relatives, there is a greater than random chance that the beneficiary of the altruistic action will itself be an altruist. Kin selection is closely bound up with the ‘gene’s eye view’ of evolution, which holds that genes, not organisms, are the true beneficiaries of the evolutionary process. The gene’s eye approach to evolution, though heuristically valuable, does not in itself resolve the levels of selection question, because selection processes that occur at many hierarchical levels can all be seen from a gene’s eye viewpoint. In recent years, the levels of selection discussion has been re-invigorated, and subtly transformed, by the important new work on the ‘major evolutionary transitions’. These transitions occur when a number of free-living biological units, originally capable of surviving and reproducing alone, become integrated into a larger whole, giving rise to a new biological unit at a higher level of organization. Evolutionary transitions are intimately bound up with the levels of selection issue, because during a transition the potential exists for selection to operate simultaneously at two different hierarchical levels.


2018 ◽  
Vol 13 (3) ◽  
pp. 25 ◽  
Author(s):  
Alexander S. Bratus ◽  
Yuri S. Semenov ◽  
Artem S. Novozhilov

Sewall Wright’s adaptive landscape metaphor penetrates a significant part of evolutionary thinking. Supplemented with Fisher’s fundamental theorem of natural selection and Kimura’s maximum principle, it provides a unifying and intuitive representation of the evolutionary process under the influence of natural selection as the hill climbing on the surface of mean population fitness. On the other hand, it is also well known that for many more or less realistic mathematical models this picture is a severe misrepresentation of what actually occurs. Therefore, we are faced with two questions. First, it is important to identify the cases in which adaptive landscape metaphor actually holds exactly in the models, that is, to identify the conditions under which system’s dynamics coincides with the process of searching for a (local) fitness maximum. Second, even if the mean fitness is not maximized in the process of evolution, it is still important to understand the structure of the mean fitness manifold and see the implications of this structure on the system’s dynamics. Using as a basic model the classical replicator equation, in this note we attempt to answer these two questions and illustrate our results with simple well studied systems.


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