scholarly journals The Origins of Coca: Museum Genomics Reveals Multiple Independent Domestications from Progenitor Erythroxylum gracilipes

2020 ◽  
Vol 70 (1) ◽  
pp. 1-13
Author(s):  
Dawson M White ◽  
Jen-Pan Huang ◽  
Orlando Adolfo Jara-Muñoz ◽  
Santiago MadriñáN ◽  
Richard H Ree ◽  
...  
Keyword(s):  
South America ◽  
Evolutionary History ◽  
Amazon Basin ◽  
Plant Domestication ◽  
Target Sequence ◽  
South American ◽  
Sequence Capture ◽  
Domestication Event ◽  
Geographic Origins ◽  
History Of

Abstract Coca is the natural source of cocaine as well as a sacred and medicinal plant farmed by South American Amerindians and mestizos. The coca crop comprises four closely related varieties classified into two species (Amazonian and Huánuco varieties within Erythroxylum coca Lam., and Colombian and Trujillo varieties within Erythroxylum novogranatense (D. Morris) Hieron.) but our understanding of the domestication and evolutionary history of these taxa is nominal. In this study, we use genomic data from natural history collections to estimate the geographic origins and genetic diversity of this economically and culturally important crop in the context of its wild relatives. Our phylogeographic analyses clearly demonstrate the four varieties of coca comprise two or three exclusive groups nested within the diverse lineages of the widespread, wild species Erythroxylum gracilipes; establishing a new and robust hypothesis of domestication wherein coca originated two or three times from this wild progenitor. The Colombian and Trujillo coca varieties are descended from a single, ancient domestication event in northwestern South America. Huánuco coca was domesticated more recently, possibly in southeastern Peru. Amazonian coca either shares a common domesticated ancestor with Huánuco coca, or it was the product of a third and most recent independent domestication event in the western Amazon basin. This chronology of coca domestication reveals different Holocene peoples in South America were able to independently transform the same natural resource to serve their needs; in this case, a workaday stimulant. [Erythroxylum; Erythroxylaceae; Holocene; Museomics; Neotropics; phylogeography; plant domestication; target-sequence capture.]

scholarly journals Dry habitats were crucibles of domestication in the evolution of agriculture in ants

2017 ◽  
Vol 284 (1852) ◽  
pp. 20170095 ◽  
Author(s):  
Michael G. Branstetter ◽  
Ana Ješovnik ◽  
Jeffrey Sosa-Calvo ◽  
Michael W. Lloyd ◽  
Brant C. Faircloth ◽  
...  
Keyword(s):  
South America ◽  
Habitat Preference ◽  
Evolutionary History ◽  
South American ◽  
Agricultural Systems ◽  
Evolutionary Time ◽  
Free Living ◽  
Seasonally Dry ◽  
Attine Ants ◽  
History Of

The evolution of ant agriculture, as practised by the fungus-farming ‘attine’ ants, is thought to have arisen in the wet rainforests of South America about 55–65 Ma. Most subsequent attine agricultural evolution, including the domestication event that produced the ancestor of higher attine cultivars, is likewise hypothesized to have occurred in South American rainforests. The ‘out-of-the-rainforest’ hypothesis, while generally accepted, has never been tested in a phylogenetic context. It also presents a problem for explaining how fungal domestication might have occurred, given that isolation from free-living populations is required. Here, we use phylogenomic data from ultra-conserved element (UCE) loci to reconstruct the evolutionary history of fungus-farming ants, reduce topological uncertainty, and identify the closest non-fungus-growing ant relative. Using the phylogeny we infer the history of attine agricultural systems, habitat preference and biogeography. Our results show that the out-of-the-rainforest hypothesis is correct with regard to the origin of attine ant agriculture; however, contrary to expectation, we find that the transition from lower to higher agriculture is very likely to have occurred in a seasonally dry habitat, inhospitable to the growth of free-living populations of attine fungal cultivars. We suggest that dry habitats favoured the isolation of attine cultivars over the evolutionary time spans necessary for domestication to occur.

scholarly journals Amazonia as the Origin and Diversification Area of Didelphidae (Mammalia: Metatheria), and a Review of the Fossil Record of the Clade

2021 ◽  
Author(s):  
Mariela C. Castro ◽  
Murilo J. Dahur ◽  
Gabriel S. Ferreira
Keyword(s):  
South America ◽  
Amazon Basin ◽  
Parametric Models ◽  
Isthmus Of Panama ◽  
Biogeographic History ◽  
Early Diversification ◽  
Northern Portion ◽  
History Of ◽  
Environmental Events ◽  
Fossil Records

AbstractDidelphidae is the largest New World radiation of marsupials, and is mostly represented by arboreal, small- to medium-sized taxa that inhabit tropical and/or subtropical forests. The group originated and remained isolated in South America for millions of years, until the formation of the Isthmus of Panama. In this study, we present the first reconstruction of the biogeographic history of Didelphidae including all major clades, based on parametric models and stratified analyses over time. We also compiled all the pre-Quaternary fossil records of the group, and contrasted these data to our biogeographic inferences, as well as to major environmental events that occurred in the South American Cenozoic. Our results indicate the relevance of Amazonia in the early diversification of Didelphidae, including the divergence of the major clades traditionally ranked as subfamilies and tribes. Cladogeneses in other areas started in the late Miocene, an interval of intense shifts, especially in the northern portion of Andes and Amazon Basin. Occupation of other areas continued through the Pliocene, but few were only colonized in Quaternary times. The comparison between the biogeographic inference and the fossil records highlights some further steps towards better understanding the spatiotemporal evolution of the clade. Finally, our results stress that the early history of didelphids is obscured by the lack of Paleogene fossils, which are still to be unearthed from low-latitude deposits of South America.

scholarly journals Endocast of the Late Triassic (Carnian) dinosaur Saturnalia tupiniquim: implications for the evolution of brain tissue in Sauropodomorpha

2018 ◽  
Author(s):  
Mario Bronzati ◽  
Oliver W M Rauhut ◽  
Jonathas S Bittencourt ◽  
Max C. Langer
Keyword(s):  
South America ◽  
Brain Tissue ◽  
Evolutionary History ◽  
Morphological Changes ◽  
Volume Reduction ◽  
Late Triassic ◽  
History Of

The evolutionary history of dinosaurs might date back to the fist stages of the Triassic (c. 250– 240 Ma), but the oldest unequivocal records of the group come from Late Triassic (Carnian – c. 230 Ma) rocks of South America. Here, we present the fist braincase endocast of a Carnian dinosaur, the sauropodomorph Saturnalia tupiniquim, and provide new data regarding the evolution of the flccular and paraflccular lobe of the cerebellum (FFL), which has been extensively discussed in the fild of palaeoneurology. Previous studies proposed that the development of a permanent quadrupedal stance was one of the factors leading to the volume reduction of the FFL of sauropods. However, based on the new data for S. tupiniquim we identifid a fist moment of FFL volume reduction in nonsauropodan Sauropodomorpha, preceding the acquisition of a fully quadrupedal stance. Analysing variations in FFL volume alongside other morphological changes in the group, we suggest that this reduction is potentially related to the adoption of a more restricted herbivore diet. In this context, the FFL of sauropods might represent a vestigial trait, retained in a reduced version from the bipedal and predatory early sauropodomorphs.

South American Missions

2021 ◽  
Author(s):  
Cameron Jones
Keyword(s):  
South America ◽  
Amazon Basin ◽  
Colonial Period ◽  
Indigenous Populations ◽  
South American ◽  
Extensive Experience ◽  
Republican Period ◽  
The North ◽  
Bourbon Reforms ◽  
Franciscan Order

While it is certainly true that more academic studies have focused on the North American missions, in terms of their historical impact South American missions were just as important to the frontiers of Spain and Portugal’s American empires. The massive size alone of the frontier region, stretching from the upper reaches of the Amazon basin to the headwaters of the Paraná as well as stretching across the lower Southern Cone, meant numerous missionary enterprises emerged in an attempt to evangelize the peoples who inhabited these regions. While small handfuls of Dominicans, Mercedarians, and Augustinians would engage in such efforts, most missions were established by the Jesuits or Franciscans. Certainly, for the Jesuits, or the Society of Jesus as they are properly known, American missions represented an extension of the Counter-Reformation for which they were created. Starting in the mid-16th century, this relatively new organization, founded in 1534, began in earnest to “reduce” the Indigenous peoples into their missions. These activities, however, abruptly ended when the Jesuits were expelled from both the Portuguese and Spanish empires in 1759 and 1767 respectfully. The much older Franciscan order had extensive experience in popular missions in Europe and was one of the first orders of regular clergy in the Americas. Franciscans, like the Jesuits, engaged in evangelizing activities throughout both North and South America from the colonial period to the present. The expulsion of the Jesuits, however, pushed them further to the forefront of missionizing efforts in the late colonial period. This acceleration of Franciscan missionary activity was aided by the establishment of the Apostolic Institute in 1682. The Institute created a pipeline of missionaries from Spain to come directly to frontier areas with funding from the crown. While this aided missionary efforts throughout South America, particularly in areas abandoned by the Jesuits, it embroiled the missionaries in the politics of the Bourbon reforms and their obsession with limited clerical power. Ultimately, while missionizing efforts continued into the Republican period, their association with the Spanish and Portuguese crowns led to widespread suppression and secularization following independence. The historiographical divide in the field tends to lie between usually older, Eurocentric histories by scholar-clerics which focus on the missionaries themselves, and newer studies carried out by more secular professional historians that examine how Indigenous populations were affected by the inherent imperialism of the missions, though exceptions abound.

scholarly journals Phylogenomic Reconstruction of the Neotropical Poison Frogs (Dendrobatidae) and Their Conservation

Diversity ◽  
2019 ◽  
Vol 11 (8) ◽  
pp. 126 ◽  
Author(s):  
Wilson X. Guillory ◽  
Morgan R. Muell ◽  
Kyle Summers ◽  
Jason L. Brown
Keyword(s):  
Bayesian Methods ◽  
Evolutionary History ◽  
Conservation Status ◽  
Nuclear Data ◽  
Nuclear Markers ◽  
Poison Frog ◽  
Sequence Capture ◽  
Genome Wide ◽  
Frog Species ◽  
History Of

The evolutionary history of the Dendrobatidae, the charismatic Neotropical poison frog family, remains in flux, even after a half-century of intensive research. Understanding the evolutionary relationships between dendrobatid genera and the larger-order groups within Dendrobatidae is critical for making accurate assessments of all aspects of their biology and evolution. In this study, we provide the first phylogenomic reconstruction of Dendrobatidae with genome-wide nuclear markers known as ultraconserved elements. We performed sequence capture on 61 samples representing 33 species across 13 of the 16 dendrobatid genera, aiming for a broadly representative taxon sample. We compare topologies generated using maximum likelihood and coalescent methods and estimate divergence times using Bayesian methods. We find most of our dendrobatid tree to be consistent with previously published results based on mitochondrial and low-count nuclear data, with notable exceptions regarding the placement of Hyloxalinae and certain genera within Dendrobatinae. We also characterize how the evolutionary history and geographic distributions of the 285 poison frog species impact their conservation status. We hope that our phylogeny will serve as a backbone for future evolutionary studies and that our characterizations of conservation status inform conservation practices while highlighting taxa in need of further study.

scholarly journals Floral-oil-producing Plantaginaceae species: geographical distribution, pollinator rewards and interactions with oil-collecting bees

2013 ◽  
Vol 13 (4) ◽  
pp. 77-89 ◽  
Author(s):  
Aline Cristina Martins ◽  
Isabel Alves-dos-Santos
Keyword(s):  
Geographical Distribution ◽  
Evolutionary History ◽  
Neotropical Region ◽  
South American ◽  
Oil Glands ◽  
Especial Case ◽  
History Of ◽  
Plant Families ◽  
Floral Oil ◽  
Pollinator Rewards

Floral oils as reward to pollinators occur in eleven plant families and appeared at least 28 times in the evolutionary history of flowering plants. They are produced in epithelial or tricomatic glands and collected by oil bee visitors. The present paper focuses on floral-oil-producing species of Plantaginaceae, a Neotropical group namely Angelonia clade. This group comprises around 40 described species in the genera Angelonia, Basistemon, Monttea, Monopera and the oil-less Melosperma. We present a revision of all species of the Angelonia clade, their geographical distribution, resources offered to pollinators and records of flower visitors, especially oil-collecting bees. These plants rely only on oil-collecting species in the tribe Centridini and Tapinotaspidini for a successful pollination, being the interaction between both partners an especial case of bee/flower adaptation in Neotropical region. Some bee species depend only on the oil of Plantaginaceae flowers to survive, while others can collect on several floral oil sources. The pollinating bees explore the oil glands located in sacs using specialized hairs in the forelegs. With this study, we hope to inspire further research relating to this fascinating group of plants, in which most species are rare and occur in highly endangered habitats in South American open vegetation biomes.

scholarly journals The unexpected survival of an ancient lineage of anseriform birds into the Neogene of Australia: the youngest record of Presbyornithidae

2016 ◽  
Vol 3 (2) ◽  
pp. 150635 ◽  
Author(s):  
Vanesa L. De Pietri ◽  
R. Paul Scofield ◽  
Nikita Zelenkov ◽  
Walter E. Boles ◽  
Trevor H. Worthy
Keyword(s):  
Evolutionary History ◽  
South Australia ◽  
First Record ◽  
South American ◽  
Crown Group ◽  
Term Survival ◽  
Skeletal Morphology ◽  
Ancient Lineage ◽  
History Of

Presbyornithids were the dominant birds in Palaeogene lacustrine assemblages, especially in the Northern Hemisphere, but are thought to have disappeared worldwide by the mid-Eocene. Now classified within Anseriformes (screamers, ducks, swans and geese), their relationships have long been obscured by their strange wader-like skeletal morphology. Reassessment of the late Oligocene South Australian material attributed to Wilaru tedfordi , long considered to be of a stone-curlew (Burhinidae, Charadriiformes), reveals that this taxon represents the first record of a presbyornithid in Australia. We also describe the larger Wilaru prideauxi sp. nov. from the early Miocene of South Australia, showing that presbyornithids survived in Australia at least until ca 22 Ma. Unlike on other continents, where presbyornithids were replaced by aquatic crown-group anatids (ducks, swans and geese), species of Wilaru lived alongside these waterfowl in Australia. The morphology of the tarsometatarsus of these species indicates that, contrary to other presbyornithids, they were predominantly terrestrial birds, which probably contributed to their long-term survival in Australia. The morphological similarity between species of Wilaru and the Eocene South American presbyornithid Telmabates antiquus supports our hypothesis of a Gondwanan radiation during the evolutionary history of the Presbyornithidae. Teviornis gobiensis from the Late Cretaceous of Mongolia is here also reassessed and confirmed as a presbyornithid. These findings underscore the temporal continuance of Australia’s vertebrates and provide a new context in which the phylogeny and evolutionary history of presbyornithids can be examined.

The evolutionary history of Senna ser. Aphyllae (Leguminosae–Caesalpinioideae), an endemic clade of southern South America

2017 ◽  
Vol 303 (10) ◽  
pp. 1351-1366
Author(s):  
Federico O. Robbiati ◽  
Ana Anton ◽  
Brigitte Marazzi ◽  
Marilyn Vásquez-Cruz ◽  
Renée H. Fortunato
Keyword(s):  
South America ◽  
Evolutionary History ◽  
Southern South America ◽  
History Of
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