scholarly journals Development and Deployment of Systems-Based Approaches for the Management of Soilborne Plant Pathogens

2016 ◽  
Vol 106 (3) ◽  
pp. 216-225 ◽  
Author(s):  
D. O. Chellemi ◽  
A. Gamliel ◽  
J. Katan ◽  
K. V. Subbarao
Keyword(s):  
Crop Production ◽  
Plant Disease ◽  
Plant Pathogens ◽  
Production Systems ◽  
Cropping Systems ◽  
Disease Suppression ◽  
Central California ◽  
Soilborne Disease ◽  
Inherent Risk ◽  
Operational Frameworks

Biological suppression of soilborne diseases with minimal use of outside interventive actions has been difficult to achieve in high input conventional crop production systems due to the inherent risk of pest resurgence. This review examines previous approaches to the management of soilborne disease as precursors to the evolution of a systems-based approach, in which plant disease suppression through natural biological feedback mechanisms in soil is incorporated into the design and operation of cropping systems. Two case studies are provided as examples in which a systems-based approach is being developed and deployed in the production of high value crops: lettuce/strawberry production in the coastal valleys of central California (United States) and sweet basil and other herb crop production in Israel. Considerations for developing and deploying system-based approaches are discussed and operational frameworks and metrics to guide their development are presented with the goal of offering a credible alternative to conventional approaches to soilborne disease management.

scholarly journals Precision agriculture and geospatial techniques for sustainable disease control

2021 ◽  
Author(s):  
Daniel P. Roberts ◽  
Nicholas M. Short ◽  
James Sill ◽  
Dilip K. Lakshman ◽  
Xiaojia Hu ◽  
...  
Keyword(s):  
Big Data ◽  
Disease Control ◽  
Crop Production ◽  
Plant Disease ◽  
Production Systems ◽  
Cropping Systems ◽  
Data Driven ◽  
Agricultural Community ◽  
Plant Disease Control ◽  
Crop Germplasm

AbstractThe agricultural community is confronted with dual challenges; increasing production of nutritionally dense food and decreasing the impacts of these crop production systems on the land, water, and climate. Control of plant pathogens will figure prominently in meeting these challenges as plant diseases cause significant yield and economic losses to crops responsible for feeding a large portion of the world population. New approaches and technologies to enhance sustainability of crop production systems and, importantly, plant disease control need to be developed and adopted. By leveraging advanced geoinformatic techniques, advances in computing and sensing infrastructure (e.g., cloud-based, big data-driven applications) will aid in the monitoring and management of pesticides and biologicals, such as cover crops and beneficial microbes, to reduce the impact of plant disease control and cropping systems on the environment. This includes geospatial tools being developed to aid the farmer in managing cropping system and disease management strategies that are more sustainable but increasingly complex. Geoinformatics and cloud-based, big data-driven applications are also being enlisted to speed up crop germplasm improvement; crop germplasm that has enhanced tolerance to pathogens and abiotic stress and is in tune with different cropping systems and environmental conditions is needed. Finally, advanced geoinformatic techniques and advances in computing infrastructure allow a more collaborative framework amongst scientists, policymakers, and the agricultural community to speed the development, transfer, and adoption of these sustainable technologies.

scholarly journals Prospects for Biological Soilborne Disease Control: Application of Indigenous Versus Synthetic Microbiomes

2017 ◽  
Vol 107 (3) ◽  
pp. 256-263 ◽  
Author(s):  
Mark Mazzola ◽  
Shiri Freilich
Keyword(s):  
Disease Control ◽  
Crop Production ◽  
Production Systems ◽  
Agricultural Soils ◽  
Management Strategies ◽  
Plant Diseases ◽  
Disease Suppression ◽  
Rapid Screening ◽  
Soilborne Disease ◽  
Functional Attributes

Biological disease control of soilborne plant diseases has traditionally employed the biopesticide approach whereby single strains or strain mixtures are introduced into production systems through inundative/inoculative release. The approach has significant barriers that have long been recognized, including a generally limited spectrum of target pathogens for any given biocontrol agent and inadequate colonization of the host rhizosphere, which can plague progress in the utilization of this resource in commercial field-based crop production systems. Thus, although potential exists, this model has continued to lag in its application. New omics’ tools have enabled more rapid screening of microbial populations allowing for the identification of strains with multiple functional attributes that may contribute to pathogen suppression. Similarly, these technologies also enable the characterization of consortia in natural systems which provide the framework for construction of synthetic microbiomes for disease control. Harnessing the potential of the microbiome indigenous to agricultural soils for disease suppression through application of specific management strategies has long been a goal of plant pathologists. Although this tactic also possesses limitation, our enhanced understanding of functional attributes of suppressive soil systems through application of community and metagenomic analysis methods provide opportunity to devise effective resource management schemes. As these microbial communities in large part are fostered by the resources endemic to soil and the rhizosphere, substrate mediated recruitment of disease-suppressive microbiomes constitutes a practical means to foster their establishment in crop production systems.

Organic Amendments for Pathogen and Nematode Control

2020 ◽  
Vol 58 (1) ◽  
pp. 277-311 ◽  
Author(s):  
Erin Rosskopf ◽  
Francesco Di Gioia ◽  
Jason C. Hong ◽  
Cristina Pisani ◽  
Nancy Kokalis-Burelle
Keyword(s):  
Crop Production ◽  
Plant Pathogens ◽  
Production Systems ◽  
Organic Amendments ◽  
Molecular Techniques ◽  
Disease Suppression ◽  
Parasitic Nematodes ◽  
Vegetable Production ◽  
Significant Progress ◽  
Plant Parasitic

The loss of methyl bromide as a soil fumigant and minimal advances in the development and registration of new chemical fumigants has resulted in a resurgence of interest in the application of organic amendments (OAs) for soilborne plant pathogen and plant-parasitic nematode management. Significant progress has been made in the characterization of OAs, application of strategies for their use, and elucidation of mechanisms by which they suppress soilborne pests. Nonetheless, their utility is limited by the variability of disease control, expense, and the logistics of introducing them into crop production systems. Recent advances in molecular techniques have led to significant progress in the elucidation of the role of bacteria and fungi and their metabolic products on disease suppression with the addition of OAs. Biosolarization and anaerobic soil disinfestation, developed to manipulate systems and favor beneficial microorganisms to maximize their impact on plant pathogens, are built on a strong historical research foundation in OAs and the physical, chemical, and biological characteristics of disease-suppressive soils. This review focuses on recent applications of OAs and their potential for the management of soilborne plant pathogens and plant-parasitic nematodes, with emphasis primarily on annual fruit and vegetable production systems.

scholarly journals iHSD Mill Efficacy on the Seeds of Australian Cropping System Weeds

2017 ◽  
Vol 32 (2) ◽  
pp. 103-108 ◽  
Author(s):  
Michael J. Walsh ◽  
John C. Broster ◽  
Stephen B. Powles
Keyword(s):  
Moisture Content ◽  
Crop Production ◽  
Production Systems ◽  
Cropping Systems ◽  
Cropping System ◽  
High Efficacy ◽  
Weed Seed ◽  
Rigid Ryegrass ◽  
Mill Speed ◽  
Wheat Chaff

AbstractIn Australia, widespread evolution of multi-resistant weed populations has driven the development and adoption of harvest weed seed control (HWSC). However, due to incompatibility of commonly used HWSC systems with highly productive conservation cropping systems, better HWSC systems are in demand. This study aimed to evaluate the efficacy of the integrated Harrington Seed Destructor (iHSD) mill on the seeds of Australia’s major crop weeds during wheat chaff processing. Also examined were the impacts of chaff type and moisture content on weed seed destruction efficacy. Initially, the iHSD mill speed of 3,000 rpm was identified as the most effective at destroying rigid ryegrass seeds present in wheat chaff. Subsequent testing determined that the iHSD mill was highly effective (>95% seed kill) on all Australian crop weeds examined. Rigid ryegrass seed kill was found to be highest for lupin chaff and lowest in barley, with wheat and canola chaff intermediate. Similarly, wheat chaff moisture reduced rigid ryegrass seed kill when moisture level exceeded 12%. The broad potential of the iHSD mill was evident, in that the reductions in efficacy due to wide-ranging differences in chaff type and moisture content were relatively small (≤10%). The results from these studies confirm the high efficacy and widespread suitability of the iHSD for use in Australian crop production systems. Additionally, as this system allows the conservation of all harvest residues, it is the best HWSC technique for conservation cropping systems.

scholarly journals Impact of Cover Crops on the Soil Microbiome of Tree Crops

2020 ◽  
Vol 8 (3) ◽  
pp. 328 ◽  
Author(s):  
Antonio Castellano-Hinojosa ◽  
Sarah L. Strauss
Keyword(s):  
Cover Crops ◽  
Sustainable Management ◽  
Crop Production ◽  
Production Systems ◽  
Cropping Systems ◽  
Soil Nutrient ◽  
Conventional Tillage ◽  
Soil Microbiome ◽  
Nitrogen And Phosphorus ◽  
Tree Crops

Increased concerns associated with interactions between herbicides, inorganic fertilizers, soil nutrient availability, and plant phytotoxicity in perennial tree crop production systems have renewed interest in the use of cover crops in the inter-row middles or between trees as an alternative sustainable management strategy for these systems. Although interactions between the soil microbiome and cover crops have been examined for annual cropping systems, there are critical differences in management and growth in perennial cropping systems that can influence the soil microbiome and, therefore, the response to cover crops. Here, we discuss the importance of cover crops in tree cropping systems using multispecies cover crop mixtures and minimum tillage and no-tillage to not only enhance the soil microbiome but also carbon, nitrogen, and phosphorus cycling compared to monocropping, conventional tillage, and inorganic fertilization. We also identify potentially important taxa and research gaps that need to be addressed to facilitate assessments of the relationships between cover crops, soil microbes, and the health of tree crops. Additional evaluations of the interactions between the soil microbiome, cover crops, nutrient cycling, and tree performance will allow for more effective and sustainable management of perennial cropping systems.

scholarly journals Productivity and Profitability of Four Crop Rotations under Limited Irrigation

2020 ◽  
Vol 36 (1) ◽  
pp. 1-9
Author(s):  
Alan J Schlegel ◽  
Yared Assefa ◽  
Daniel O’Brien
Keyword(s):  
Crop Rotation ◽  
Water Use ◽  
Crop Production ◽  
Production Systems ◽  
Cropping Systems ◽  
Grain Sorghum ◽  
Wheat Crop ◽  
Corn Yield ◽  
Supplementary Irrigation ◽  
Corn Grain

Abstract. Selection of optimal crops and cropping systems for most efficient water use specific for local environments can improve global water security. Limited irrigation with ground water is one alternative to alleviate crops from low amount or unevenly distributed water in the growing seasons in semi-arid regions. The main objectives of this research were to quantify yield-water use relationships of three limited irrigated crops, determine effect of crop selection on profitability with limited irrigation, and identify profitable and alternative crop production systems. A field study was conducted at the Kansas State University Southwest Research-Extension Center near Tribune, Kansas, from 2012 through 2017. There were four treatments in the study, two 1-yr systems of continuous corn ( L.) (C-C) and continuous grain sorghum (L.) (GS-GS) and two 2-yr rotations of corn-grain sorghum (C-GS) and corn-winter wheat ( L.) (C-W). Overall corn yield after wheat (C-W) was about 1.4 Mg (ha)-1 greater than C-C. Corn and sorghum yields were similar grown as monoculture or in rotation with each other. Available soil water at corn planting and during the growing season were 20 to 40 mm (240 cm profile-1) less in the C-GS rotation compared with C-C and C-W rotations. Corn yield increased as water use (yield-water use) increased in C-W rotation but yield-water use relationships tended to be negative in C-C and C-GS rotations. Grain sorghum yield increased with water use in both rotations but at a greater rate in GS-GS compared with C-GS. Despite greater corn grain yield in C-W, our economic analysis showed that wheat was the least profitable of the three crops causing the C-W rotation to be least profitable. In this study, the most profitable limited irrigation crop rotation was corn-grain sorghum (C-GS). Keywords: Corn-sorghum-wheat, Crop rotation, Limited irrigation, Profitability, Supplementary irrigation, Sustainability.

scholarly journals Soil-Biodegradable Plastic Mulches Undergo Minimal in-Soil Degradation in a Perennial Raspberry System after 18 Months

Horticulturae ◽  
2020 ◽  
Vol 6 (3) ◽  
pp. 47
Author(s):  
Huan Zhang ◽  
Markus Flury ◽  
Carol Miles ◽  
Hang Liu ◽  
Lisa DeVetter
Keyword(s):  
Production System ◽  
Crop Production ◽  
Production Systems ◽  
Cropping Systems ◽  
Biodegradable Plastic ◽  
Perennial Crop ◽  
Soil Burial Test ◽  
Soil Burial ◽  
Soil Exposure

Soil-biodegradable plastic mulches (BDMs) are made from biodegradable materials that can be bio-based, synthetic, or a blend of these two types of polymers, which are designed to degrade in soil through microbial activities. The purpose of BDMs is to reduce agricultural plastic waste by replacing polyethylene (PE) mulch, which is not biodegradable. Most studies have evaluated the breakdown of BDMs within annual production systems, but knowledge of BDM breakdown in perennial systems is limited. The objective of this study was to evaluate the deterioration and degradation of BDMs in a commercial red raspberry (Rubus ideaus L.) production system. Deterioration was low (≤11% percent soil exposure; PSE) for all mulches until October 2017 (five months after transplanting, MAT). By March 2018 (10 MAT), deterioration reached 91% for BDMs but remained low for PE mulch (4%). Mechanical strength also was lower for BDMs than PE mulch. In a soil burial test in the raspberry field, 91% of the BDM area remained after 18 months. In-soil BDM degradation was minimal, although the PSE was high. Since mulch is only applied once in a perennial crop production system, and the lifespan of the planting may be three or more years, it is worth exploring the long-term degradation of BDMs in perennial cropping systems across diverse environments.

Managing arbuscular mycorrhizal fungi in cropping systems

2005 ◽  
Vol 85 (1) ◽  
pp. 31-40 ◽  
Author(s):  
C. Plenchette ◽  
C. Clermont-Dauphin ◽  
J. M. Meynard ◽  
J. A. Fortin
Keyword(s):  
Arbuscular Mycorrhizal Fungi ◽  
Mycorrhizal Fungi ◽  
Crop Production ◽  
Plant Pathogens ◽  
Cropping Systems ◽  
Arbuscular Mycorrhizal ◽  
Biological Interactions ◽  
Agricultural Systems ◽  
Mycorrhizal Dependency ◽  
Conventional Agriculture

Market globalization, demographic pressure, and environmental degradation have led us to reconsider many of our current agricultural systems. The heavy use of chemical inputs, including fertilizers and pesticides, has resulted in pollution, decreased biodiversity in intensively-farmed regions, degradation of fragile agro-ecosystems, and prohibitive costs for many farmers. Low input sustainable cropping systems should replace conventional agriculture, but this requires a more comprehensive understanding of the biological interactions within agro-ecosystems. Mycorrhizal fungi appear to be the most important telluric organisms to consider. Mycorrhizae, which result from a symbiosis between these fungi and plant roots, are directly involved in plant mineral nutrition, the control of plant pathogens, and drought tolerance. Most horticultural and crop plants are symbiotic with arbuscular mycorrhizal fungi. Mycorrhizal literature is abundant, showing that stimulation of plant growth can be mainly attributed to improved phosphorous nutrition. Although the mycorrhizal potential of its symbiosis to improve crop production is widely recognized, it is not implemented in agricultural systems. There is an urgent need to improve and widely apply analytical methods to evaluate characteristics such as, relative field mycorrhizal dependency, soil mycorrhizal infectivity, and mycorrhizal receptivity of soil. Decreased use of fertilizers, pesticides, and tillage will favour arbuscular mycorrhizal fungi. However, shifting from one system to a more sustainable one is not easy since all components of the cropping system are closely linked. Different cases, from actual agricultural practices in different countries, are analyzed to highlight situations in which mycorrhizae might or might not play a role in developing more sustainable agriculture. Key words: Cropping systems, mycorrhizae, sustainability, technical itineraries, rotation

scholarly journals Comparison of Two Commercial Recirculated Aquacultural Systems and Their Microbial Potential in Plant Disease Suppression

2021 ◽  
Author(s):  
Sammar Khalil ◽  
Preeti Panda ◽  
Farideh Ghadamgahi ◽  
AnnaKarin Rosberg ◽  
Ramesh R Vetukuri
Keyword(s):  
Plant Growth ◽  
Fish Species ◽  
Plant Pathogens ◽  
Extracellular Enzymes ◽  
Production Systems ◽  
Sampling Site ◽  
Disease Suppression ◽  
Bacterial Strains ◽  
Promising Tool

Aquaponics are food production systems advocated for food security and health. Their sustainability from a nutritional and plant health perspective is, however, a significant challenge. Recirculated aquaculture systems (RAS) form a major part of aquaponic systems but knowledge about their potential to benefit plant growth and suppress their pathogens is limited. The current study tested if the diversity and function of microbial communities in two commercial RAS were specific to the fish species used (Tilapia or Clarias) and sampling site (fish tanks and wastewaters), and whether they confer benefits to plants and have in vitro antagonistic potential towards plant pathogens. Microbial diversity and composition was found to be dependent on fish species and sample site. The Tilapia RAS hosted higher bacterial diversity than the Clarias RAS; but the latter hosted higher fungal diversity. Both Tilapia and Clarias RAS hosted bacterial and fungal communities that promoted plant growth, inhibited plant pathogens and encouraged biodegradation. The production of extracellular enzymes, related to nutrient availability and pathogen control, by bacterial strains isolated from the Tilapia and Clarias systems, makes them a promising tool in aquaponics and in their system design.

scholarly journals RNA interference approaches for plant disease control

BioTechniques ◽  
2020 ◽  
Vol 69 (6) ◽  
pp. 469-477
Author(s):  
Yen-Wen Kuo ◽  
Bryce W Falk
Keyword(s):  
Rna Interference ◽  
Disease Control ◽  
Crop Production ◽  
Plant Disease ◽  
Plant Pathogens ◽  
Control Plant ◽  
Cost Effective ◽  
Plant Diseases ◽  
Natural Ecosystems ◽  
Plant Disease Control

Plant diseases caused by a variety of pathogens can have severe effects on crop plants and even plants in natural ecosystems. Despite many effective conventional approaches to control plant diseases, new, efficacious, environmentally sound and cost-effective approaches are needed, particularly with our increasing human population and the effects on crop production and plant health caused by climate change. RNA interference (RNAi) is a gene regulation and antiviral response mechanism in eukaryotes; transgenic and non transgenic plant-based RNAi approaches have shown great effectiveness and potential to target specific plant pathogens and help control plant diseases, especially when no alternatives are available. Here we discuss ways in which RNAi has been used against different plant pathogens, and some new potential applications for plant disease control.

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