scholarly journals Arenavirus budding resulting from viral-protein-associated cell membrane curvature

2013 ◽  
Vol 10 (86) ◽  
pp. 20130403 ◽  
Author(s):  
David Schley ◽  
Robert J. Whittaker ◽  
Benjamin W. Neuman

Viral replication occurs within cells, with release (and onward infection) primarily achieved through two alternative mechanisms: lysis, in which virions emerge as the infected cell dies and bursts open; or budding, in which virions emerge gradually from a still living cell by appropriating a small part of the cell membrane. Virus budding is a poorly understood process that challenges current models of vesicle formation. Here, a plausible mechanism for arenavirus budding is presented, building on recent evidence that viral proteins embed in the inner lipid layer of the cell membrane. Experimental results confirm that viral protein is associated with increased membrane curvature, whereas a mathematical model is used to show that localized increases in curvature alone are sufficient to generate viral buds. The magnitude of the protein-induced curvature is calculated from the size of the amphipathic region hypothetically removed from the inner membrane as a result of translation, with a change in membrane stiffness estimated from observed differences in virion deformation as a result of protein depletion. Numerical results are based on experimental data and estimates for three arenaviruses, but the mechanisms described are more broadly applicable. The hypothesized mechanism is shown to be sufficient to generate spontaneous budding that matches well both qualitatively and quantitatively with experimental observations.

Viruses ◽  
2021 ◽  
Vol 13 (12) ◽  
pp. 2441
Author(s):  
Macauley Locke ◽  
Grant Lythe ◽  
Martín López-García ◽  
César Muñoz-Fontela ◽  
Miles Carroll ◽  
...  

Type I interferons (IFNs) are cytokines with both antiviral properties and protective roles in innate immune responses to viral infection. They induce an antiviral cellular state and link innate and adaptive immune responses. Yet, viruses have evolved different strategies to inhibit such host responses. One of them is the existence of viral proteins which subvert type I IFN responses to allow quick and successful viral replication, thus, sustaining the infection within a host. We propose mathematical models to characterise the intra-cellular mechanisms involved in viral protein antagonism of type I IFN responses, and compare three different molecular inhibition strategies. We study the Ebola viral protein, VP35, with this mathematical approach. Approximate Bayesian computation sequential Monte Carlo, together with experimental data and the mathematical models proposed, are used to perform model calibration, as well as model selection of the different hypotheses considered. Finally, we assess if model parameters are identifiable and discuss how such identifiability can be improved with new experimental data.


2000 ◽  
Vol 84 (4) ◽  
pp. 1863-1868 ◽  
Author(s):  
Kyle L. Kirkland ◽  
Adam M. Sillito ◽  
Helen E. Jones ◽  
David C. West ◽  
George L. Gerstein

We have previously developed a model of the corticogeniculate system to explore cortically induced synchronization of lateral geniculate nucleus (LGN) neurons. Our model was based on the experiments of Sillito et al. Recently Brody discovered that the LGN events found by Sillito et al. correlate over a much longer period of time than expected from the stimulus-driven responses and proposed a cortically induced slow covariation in LGN cell membrane potentials to account for this phenomenon. We have examined the data from our model, and we found, to our surprise, that the model shows the same long-term correlation. The model's behavior was the result of a previously unsuspected oscillatory effect, not a slow covariation. The oscillations were in the same frequency range as the well-known spindle oscillations of the thalamocortical system. In the model, the strength of feedback inhibition from the cortex and the presence of low-threshold calcium channels in LGN cells were important. We also found that by making the oscillations more pronounced, we could get a better fit to the experimental data.


Author(s):  
Jing Zou ◽  
Kun Jin ◽  
Tongsheng Chen ◽  
Xinlei Li

Abstract When cells are cultured on the micro- or nano- structure substrate, filamentous pseudopods are formed at specific locations due to the effects of substrate morphology and local membrane curvature, which provides a powerful method to guide cell migration and neurite orientation. However, it is unclear the effects of substrate surface morphology and initial cell membrane on pseudopod formation and growth. Here, we present a quantitative thermodynamic model to investigate the difficulty of pseudopod formation. Based on the established model, we studied the effects of substrate morphology and the curvature of the initial cell membrane on filamentous pseudopods formation by analyzing the magnitude of an average driving force. We find that the pseudopod-substrate adhesion and the larger curvature radius of the initial cell membrane can facilitate filamentous pseudopods formation due to the smaller minimum resistance energy. Furthermore, our theoretical results seem to show a broad agreement with experimental observations, which implies that these studies would provide useful guidance to control the pseudopods formation on substrate for biomedical applications.


Hypertension ◽  
2001 ◽  
Vol 38 (5) ◽  
pp. 1158-1161 ◽  
Author(s):  
Hayden Huang ◽  
Roger D. Kamm ◽  
Peter T.C. So ◽  
Richard T. Lee

2005 ◽  
Vol 45 (supplement) ◽  
pp. S182
Author(s):  
M. Oka ◽  
M. Yasuda ◽  
H. Uehara ◽  
Afrin Rehana ◽  
H. Sekiguchi ◽  
...  

2016 ◽  
Vol 29 (8) ◽  
pp. 595-598 ◽  
Author(s):  
Yuri Miyashita ◽  
Go Atsumi ◽  
Kenji S. Nakahara

Plants recognize viral infection via an immune receptor, i.e., nucleotide-binding site (NB)-leucine-rich repeat (LRR) proteins. Another immune receptor, receptor-like kinase proteins, which share an LRR domain with NB-LRRs, perceive conserved molecules of pathogens called pathogen- or microbe-associated molecular patterns, but NB-LRRs generally perceive particular viral proteins. As viruses can evolve more rapidly than the host immune system, how do plant immune systems, which rely on the perception of proteins, remain effective? Viral adaptive evolution may be controlled by penalties that result from mutations in viral proteins that are perceived by NB-LRRs. Our recent studies in pea (Pisum sativum) suggest a penalty of increased susceptibility to another immune system. When a viral protein mutates to evade one immune system, the virus with the mutated protein becomes more susceptible to another. Such antagonistic pleiotropy of a viral protein by two independent plant immune systems may have precedents. Plants may rely on pairs of immune systems to constrain adaptive evolution by viruses and thereby maintain durable antiviral immunity.


2008 ◽  
Vol 5 (28) ◽  
pp. 1371-1386 ◽  
Author(s):  
Marcus Dymond ◽  
George Attard ◽  
Anthony D Postle

The alkyllysophospholipid (ALP) analogues Mitelfosine and Edelfosine are anticancer drugs whose mode of action is still the subject of debate. It is agreed that the primary interaction of these compounds is with cellular membranes. Furthermore, the membrane-associated protein CTP: phosphocholine cytidylyltransferase (CCT) has been proposed as the critical target. We present the evaluation of our hypothesis that ALP analogues disrupt membrane curvature elastic stress and inhibit membrane-associated protein activity (e.g. CCT), ultimately resulting in apoptosis. This hypothesis was tested by evaluating structure–activity relationships of ALPs from the literature. In addition we characterized the lipid typology, cytotoxicity and critical micelle concentration of novel ALP analogues that we synthesized. Overall we find the literature data and our experimental data provide excellent support for the hypothesis, which predicts that the most potent ALP analogues will be type I lipids.


2013 ◽  
Vol 104 (2) ◽  
pp. 613a
Author(s):  
Kathrin Spendier ◽  
Joshua B. Baptist ◽  
Zbigniew J. Celinski ◽  
Anatoliy V. Glushchenko

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