scholarly journals The gut microbiome stability of a butterflyfish is disrupted on severely degraded Caribbean coral reefs

2020 ◽  
Author(s):  
Friederike Clever ◽  
Jade M. Sourisse ◽  
Richard F. Preziosi ◽  
Jonathan A. Eisen ◽  
E. Catalina Rodriguez Guerra ◽  
...  

AbstractEnvironmental degradation has the potential to alter key mutualisms that underline the structure and function of ecological communities. While it is well recognized that the global loss of coral reefs alters fish communities, the effects of habitat degradation on microbial communities associated with fishes remain largely unknown despite their fundamental roles in host nutrition and immunity. Using a gradient of reef degradation, we show that the gut microbiome of a facultative, coral-feeding butterflyfish (Chaetodon capistratus) is significantly more variable among individuals at degraded reefs with very low live coral cover (~0%) than reefs with higher coral cover (~30%), mirroring a known pattern of microbial imbalance observed in immunodeficient humans and other stressed or diseased animals. We demonstrate that fish gut microbiomes on severely degraded reefs have a lower abundance of Endozoicomonas and a higher diversity of anaerobic fermentative bacteria, which suggests a broader and less coral dominated diet. The observed shifts in fish gut bacterial communities across the habitat gradient extend to a small set of potentially beneficial host associated bacteria (i.e., the core microbiome) suggesting essential fish-microbiome interactions are vulnerable to severe coral degradation.

PeerJ ◽  
2018 ◽  
Vol 6 ◽  
pp. e4922 ◽  
Author(s):  
Roberto González-Gómez ◽  
Patricia Briones-Fourzán ◽  
Lorenzo Álvarez-Filip ◽  
Enrique Lozano-Álvarez

Coral reefs sustain abundant and diverse macrocrustaceans that perform multiple ecological roles, but coral reefs are undergoing massive degradation that may be driving changes in the species composition and abundance of reef-associated macrocrustaceans. To provide insight into this issue, we used non-destructive visual census techniques to compare the diversity and abundance of conspicuous macrocrustaceans (i.e., those >1 cm and visible without disturbance) between two shallow Caribbean coral reefs similar in size (∼1.5 km in length) and close to each other, but one (“Limones”) characterized by extensive stands of the branching coral Acropora palmata, and the other (“Bonanza”) dominated by macroalgae and relic coral skeletons and rubble (i.e., degraded). We also assessed the structural complexity of each reef and the percent cover of various benthic community components. Given the type of growth of A. palmata, we expected to find a greater structural complexity, a higher cover of live coral, and a lower cover of macroalgae on Limones, and hence a more diverse and abundant macrocrustacean community on this reef compared with Bonanza. Overall, we identified 63 macrocrustacean species (61 Decapoda and two Stomatopoda). Contrary to our expectations, structural complexity did not differ significantly between the back-reef zones of these reefs but varied more broadly on Limones, and the diversity and abundance of macrocrustaceans were higher on Bonanza than on Limones despite live coral cover being higher on Limones and macroalgal cover higher on Bonanza. However, the use of various types of microhabitats by macrocrustaceans differed substantially between reefs. On both reefs, the dominant species were the clinging crab Mithraculus coryphe and the hermit crab Calcinus tibicen, but the former was more abundant on Bonanza and the latter on Limones. M. coryphe occupied a diverse array of microhabitats but mostly coral rubble and relic skeletons, whereas C. tibicen was often, but not always, found associated with colonies of Millepora spp. A small commensal crab of A. palmata, Domecia acanthophora, was far more abundant on Limones, emerging as the main discriminant species between reefs. Our results suggest that local diversity and abundance of reef-associated macrocrustaceans are partially modulated by habitat degradation, the diversity of microhabitat types, and the establishment of different commensal associations rather than by structural complexity alone.


2021 ◽  
Vol 324 ◽  
pp. 03007
Author(s):  
Ni Wayan Purnama Sari ◽  
Rikoh Manogar Siringoringo ◽  
Muhammad Abrar ◽  
Risandi Dwirama Putra ◽  
Raden Sutiadi ◽  
...  

Observations of the condition of coral reefs have been carried out in Spermonde waters from 2015 to 2018. The method used in this observation uses Underwater Photo Transect (UPT), and the data obtained is analyzed using CPCe (Coral Point Count with Excel Extensions) software. The results show that the percentage of coral cover has increased from year to year. The percentage of live coral cover in 2015 was 19.64%, 23.60 in 2016, 23.72% in 2017, and 27.83% in 2018. The increase in live coral cover from year to year is thought to occur due to the availability of nutrients. or increasing public awareness, considering this location is one of the most famous tourist attractions in Makassar. Coral reef health index values can be used to classify coral reef health. Through the analysis of the coral reef health index, an index value of 4 was obtained, which means that the condition of the coral reefs is in the “moderate” category.


Author(s):  
Wei Khang Heng ◽  
Ming-Jay Ho ◽  
Chao-Yang Kuo ◽  
Ya-Yi Huang ◽  
Chia-Ying Ko ◽  
...  

Outbreak of crown-of-thorns sea stars, Acanthaster cf. solaris, were documented in coral reefs around Taiping Island, Spratlys for the first time. The outbreak might be thereason for the significant decline in live coral cover in 2021. Comprehensive monitoring through regional collaboration is needed.


Author(s):  
Joel G. Becira ◽  
Benjamin J. Gonzales ◽  
Honorio B. Pagliawan

In Palawan, Philippines, Honda Bay is fast becoming a target recreational site for curious domestic and foreign visitors. The general objectives of this resource assessment are to gather information regarding status of the marine resources in Pandan Island, and to provide recommendations for their sustainable use. Assessment was done using line intercept transect (LIT), fish visual census (FVC) and an imaginary transect belt for coral cover, fish, and macro-invertebrates, respectively. Average live coral cover around Pandan Island can be categorized as good (57%), with stations 7 and 1 and 2 categorized as excellent (76-100%) and fair (26-50%) conditions, respectively. Some 178 fish species were recorded in Pandan Island waters of which seven (7) highly target and 29 common commercial fish species were found. The estimated total reef fish biomass around Pandan Island is 588 mt/ km2. A total of eight macro invertebrate (shells, etc.) species belonging to five families was found around Pandan Island. The study concluded that of these eight species, six are commercially important,Tridacnacro cea(taklobo), Tridacnasquamosa (taklobo), Hippopusporcellanus(taklobo), Trochusniloticus(topshell), Pinna nobilis (tarab), and Bohadschiamarmota (sea cucumber). Five of these species the T. crocea, T. squamosa, H. porcellanus, P. nobilis, and T. niloticus are listed as endangered species by International Union for Conservation of Nature.   Keywords - target species, macro-invertebrates, coral cover, coral reefs, reef fish, conservation


2018 ◽  
Vol 66 (1-1) ◽  
pp. 280 ◽  
Author(s):  
Juan José Alvarado ◽  
Andrés Beita-Jiménez ◽  
Sebastián Mena ◽  
Cindy Fernández ◽  
Jorge Cortés ◽  
...  

Abstract: When conservation can keep up with development´s pace: Health status of coral ecosystems in the North Pacific of Costa Rica. Coral reefs are diverse and productive ecosystems, despite this, they are being threatened by human activities that enhance the detrimental impact of the natural phenomenon’s like Harmful Algal Blooms (HAB). The north Pacific of Costa Rica has been characterized as one of the best regions for the coral reefs development in the country. However, many of these ecosystems are being lost as a result of eutrophication, overfishing, invasive species and others impacts that affect the region. In the present study, live coral cover in the north Pacific was 5.0 ± 10.4(s.d.) %, with a domination in the ecosystems by turf algae. Twenty-six invertebrate taxa were registered in the region with the predominance of the sea urchin Diadema mexicanum. Ninety-four species of reef fish were identified. Snappers and some planktivores species were the groups with the highest frequency and abundance. The localities previously studied in the 1990 decade, presented a mean live coral cover between 40-50 %, whereby the actual state of the reef reflect a significant deterioration. This decline in coral cover is due to natural events like the El Niño, as well as the decrease in water quality in the region. In recent years, proliferations of the invasive seaweed Caulerpa sertularioides and high densities of bioerosive sea urchins have been reported, mainly associated with HAB events. Likewise, fish communities have low biomass, especially in the vicinity of fishing villages. The state of the reefs in the North Pacific is worrying and requires actions for its recovery and conservation, for which there must be better planning of the development of projects and activities on the coast. Rev. Biol. Trop. 66(Suppl. 1): S280-S308. Epub 2018 April 01. 


2020 ◽  
Vol 23 (3) ◽  
pp. 333-340
Author(s):  
Munasik Munasik ◽  
Aldion Adin Nugroho ◽  
Retno Hartati ◽  
Agus Sabdono ◽  
Sugiyanto Sugiyanto ◽  
...  

Artificial Patch Reef (APR) have been applied as a new method for Biodiversity Conservation Program at Panjang Island, Jepara since 2015. Previous study suggested that design and location of artificial reefs installation affected to abundance of reef fishes, associated with the artificial reef.  This study aims to investigated community structure of reef fishes associated to artificial patch reef comparing to reef fishes in nearby natural reefs. Assessment of coral reef condition on two habitats were conducted on July 2019, after 4 years deployment.  The results show that artificial patch reefs with a percentage of live coral cover are less than half of natural coral reefs, and have succeeded in increasing the abundance of reef fish with nearly the same density and community structure resembling reef fish in natural coral reefs. The similarity in community structure of the two habitats is probably due to the similarity in habitat type and morphology of the hard corals. The results indicate that Artificial Patch Reef (APR) reefs have increased the coral cover of Acropora branching and resulted in increased reef fish abundance which is compatible with reef fish communities associated with natural coral reefs around it. Aplikasi metode baru terumbu buatan Artificial patch Reef (APR) pada Program Konservasi Bioiversitas Pulau Panjang, Jepara telah dilakukan sejak 2015. Hasil studi menunjukkan bahwa pemilihan desain dan lokasi pemasangan terumbu buatan yang tepat akan meningkatkan kelimpahan ikan karang. Tujuan penelitian ini adalah untuk mengetahui keberhasilan penerapan terumbu buatan APR melalui kelimpahan ikan karang yang berasosiasi pada terumbu buatan dan terumbu karang alami di sekitarnya. Penilaian kondisi terumbu karang tersebut telah dilakukan pada Juli 2019 setelah 4 (empat) tahun pemasangan terumbu buatan. Hasil studi menunjukkan bahwa terumbu buatan dengan persentase tutupan karang hidup lebih kecil, separuhnya dari tutupan pada terumbu karang alami telah berhasil meningkatkan kelimpahan ikan karang dengan densitas hampir sama dan struktur komunitasnya menyerupai ikan karang yang berasosiasi dengan terumbu karang alami. Kesamaan struktur komunitas kedua habitat kemungkinan akibat kesamaan tipe habitat dan morfologi karang keras penyusunya. Hasil ini mengindikasikan bahwa terumbu buatan Artificial patch Reef (APR) telah meningkatkan tutupan karang bercabang Acropora dan berakibat terhadap meningkatnya kelimpahan ikan karang yang sesuai dengan komunitas ikan karang yang berasosiasi dengan terumbu karang alami di sekitarnya.


2020 ◽  
Vol 12 (2) ◽  
pp. 263
Author(s):  
Idris Idris ◽  
Neviaty P. Zamani ◽  
Suharsono Suharsono ◽  
Fakhrurrozi Fakhrurrozi

HighlightDamage to coral reefs by ship aground is twice the area of a football fieldFound four zones of damage including runoff, dune, blow and dispersalMortality of live coral and other benthic biota ranges from 75-100% in the affected locationThe form of damaged live coral growth is predominantly slow growing.Eight hard coral species were found on the IUCN-Redlist list with a vulnerable status.AbstractShip grounding on coral reefs often results in physical and biological damage, including dislodging and removal of corals from reefs, destruction of coral skeletons, erosion and removal of sediment deposits, and loss of three-dimensional complexity. Indonesia, as an archipelagic country, is very vulnerable to various pressures; for example, the case of ship grounding is a great concern of scientists, managers, divers, and sailors themselves. Most of the damage is very severe. The purpose of the research conducted is to identify the condition of the live coral cover, mapping the type and extent of coral reef damage, affected coral species, their conservation status, and to quantify the extent of the area of coral reef damage. Measuring the extent of damage to coral reef ecosystems using the fishbone method, while the level of damage and its impact was measured using the Underwater Photo Transect (UPT) and belt transect method. The event of the grounding of the MV Lyric Poet on the Bangka Waters, Bangka-Belitung Province, has caused damage to the coral reef ecosystem. There are four damage zones identified, i.e., trajectory, mound, propeller, and dispersion zone. Corals are damaged with a total area of 13.540m2; equivalent to twice that of an international football field. Diversity of hard coral found as many as 49 species included in the CITES-Appendix II. A total of eight protected species are included in the IUCN Red List with extinction-prone status.


2021 ◽  
Vol 7 (2) ◽  
pp. 238-247
Author(s):  
Nurliah Buhari ◽  
Mahardika Rizqi Himawan ◽  
Edwin Jefri ◽  
Paryono Paryono ◽  
Ibadur Rahman ◽  
...  

Gili Matra Aquatic Tourism Park has two conservation targets, namely biological targets and social, cultural and economic targets. Coral reef ecosystems, apart from being a conservation target, are also an attraction for tourists to visit. This research was conducted to determine the condition of the coral reef ecosystem to be used as the basis for the management of conservation areas. The research was conducted by collecting coral reef data either through surveys or secondary data from the results of previous studies. Coral reef survey using the standard Line Intercept Transect method. The survey results show that the condition of coral reefs in the utilization zone is better than the core zone. Live coral cover in the utilization zone reached 71% so it was categorized as good, while in the core zone it only reached 8% so it was categorized as bad. Coral reefs in the core zone are unable to recover even though the number of tourists has decreased during the Covid-19 pandemic. Therefore, the location of the core zone on Gili Air needs to be evaluated further so that the effectiveness of Gili Matra TWP management can be improved.  Key words: coral reefs; Gili Matra; Conservation


2015 ◽  
Vol 37 (2) ◽  
pp. 57-61
Author(s):  
Suharsono

Lembeh reefs and its water surrounding are among the richest and most diverse in marine biota in Indonesia. The biota and reefs in this area have an important contribution to the province’s economy in the form of tourisms and fishery activities. An inventory using line intercept transect and free collection on the coral diversity has been conducted in four different locations showed that live coral cover ranging from 12.2–60.7% while sand rubble ranged from 4.67 to 78.67%. Among the life form categories, sponge dominated other biota with 0.47–21.97% coverage. Macro algae and turf algae cover were low at all sites, with average less than 2.07%. A total of 193 corals species belonging to 68 genera were recognized from this area. The differences among sites may be consequences of water quality, habitat variability and condition of the land base activities. Water turbidity in the coastal area of Kema was high due to the effects of water discharge from river mouth. Further, poor land management, development of port and human settlement leading to sedimentation, water pollution and poor water quality, remain the primary causes of reefs declines. Busy harbor and local sea transportation will be the major cause of coral reef degradation in the near future. There is a need to increase awareness of local people about the important of coral reefs and to develop management and conservation efforts involving scientists, academe and tourist operators. In addition, it is a need to strengthen the capabilities and capacities of institutions that concern reef management and enforce legislation. 


Sensors ◽  
2019 ◽  
Vol 19 (19) ◽  
pp. 4309
Author(s):  
Rongyong Huang ◽  
Huiya Zhang ◽  
Kefu Yu

Coral reefs are important as they can help to maintain ecological balance, biological resources, and species diversity on earth. However, they are globally threatened by human activities and climate change. As live coral cover (LCC) is regarded as an important measure of the health of coral reefs, analysis on LCC change associated with environmental parameters, such as chlorophyll-a concentration (Chl-a), sea surface temperature (SST), and photosynthetically active radiation (PAR), is of great value. Research on this front would help us comprehend the changes in coral reefs induced by human activities and global changes. Instead of using spasmodically in-field-measured environmental parameters, in this study, we chose to combine the successive Chl-a, SST, and PAR products of the Moderate Resolution Imaging Spectroradiometer (MODIS) with historic LCC records to establish an empirical relationship using nonlinear optimization. Thereafter, the established relationship was further used to discuss some possible developments of LCCs. According to the experiments, we concluded that the degradation of the LCC around Weizhou Island may be mainly caused by human-activity-caused eutrophication. Besides, we also showed that even if the Chl-a and the PAR can keep constant with current average levels, the corals around Weizhou Island may still be in a risk of disappearing between 2120–2140 as the SST continues to rise.


Sign in / Sign up

Export Citation Format

Share Document