A graph-based approach for representing, integrating and analysing neuroscience data: the case of the murine basal ganglia

2021 ◽  
Vol ahead-of-print (ahead-of-print) ◽  
Author(s):  
Maren Parnas Gulnes ◽  
Ahmet Soylu ◽  
Dumitru Roman

PurposeNeuroscience data are spread across a variety of sources, typically provisioned through ad-hoc and non-standard approaches and formats and often have no connection to the related data sources. These make it difficult for researchers to understand, integrate and reuse brain-related data. The aim of this study is to show that a graph-based approach offers an effective mean for representing, analysing and accessing brain-related data, which is highly interconnected, evolving over time and often needed in combination.Design/methodology/approachThe authors present an approach for organising brain-related data in a graph model. The approach is exemplified in the case of a unique data set of quantitative neuroanatomical data about the murine basal ganglia––a group of nuclei in the brain essential for processing information related to movement. Specifically, the murine basal ganglia data set is modelled as a graph, integrated with relevant data from third-party repositories, published through a Web-based user interface and API, analysed from exploratory and confirmatory perspectives using popular graph algorithms to extract new insights.FindingsThe evaluation of the graph model and the results of the graph data analysis and usability study of the user interface suggest that graph-based data management in the neuroscience domain is a promising approach, since it enables integration of various disparate data sources and improves understanding and usability of data.Originality/valueThe study provides a practical and generic approach for representing, integrating, analysing and provisioning brain-related data and a set of software tools to support the proposed approach.

2018 ◽  
Vol 31 (3) ◽  
pp. 770-790 ◽  
Author(s):  
Hemamali Tennakoon ◽  
George Saridakis ◽  
Anne-Marie Mohammed

PurposeToday’s world of digital and mobile media does not require actual physical contact, between the suitable target and the motivated offender, as with traditional crime. In fact, as Mesch (2009) contended that the internet is not merely an information channel but it creates a new space of activities for children, where they are exposed to motivated offenders and the actors of fourth party. Therefore, for the sake of children’s safety, the practice of parental mediation control is increasingly becoming more pertinent everyday. Thus, the purpose of this paper is to examine how parental mediation control in Sri Lanka is influenced by their internet self-efficacy, their experience as online victims and their trust in online users.Design/methodology/approachThis paper uses a unique data set of computer and internet users from Sir Lanka to examine parental intervention in their children’s online activities. Specifically, the data set contains 347 responses from computer and internet users. To analyze the data, the authors use a binary dependent (probit) model.FindingsThe results show that such factors alter the baseline probability of parental intervention. However, some differences are found between younger and older parents, with the latter group responding more to trust in online users and victimization experience while the former is mainly driven from computer self-efficacy. In particular, the older group is less likely to trust online internet users in terms of never adding unknown persons in the social media. Finally, being self-employed and an older parent has a positive effect on the likelihood of adopting parental controls, possibly because of the non-pecuniary attributes of self-employment.Originality/valueThis study adds to the emerging parental mediation control literature by looking at the likelihood of younger and older parents who were victims of cybercrimes, who have greater internet self-efficacy and lower online third-party trust to adopt parental mediation control behaviors. Also another contribution to the literature is the role of occupation type on parental monitoring behaviors.


2019 ◽  
Vol 14 (1) ◽  
pp. 69-91
Author(s):  
Zhe Sun ◽  
Liang Zhao

Purpose Building trust is critical in reverse mergers and acquisitions (M&As), attributed to the divergence of governance and culture between the East and the West. This paper aims to explore the barriers and trust-building practices of Chinese managers in reverse M&As in developed countries. Design/methodology/approach The primary data set of this research contains case studies of two Chinese M&A deals and in-depth interviews with managers and advisories in the Netherlands. Findings This research finds that the divergences of decision-making structure, communication style and trust orientation generate barriers to the trust building in Chinese reverse M&As. The third-party advisory participation helps to build cognition-based trust of acquired company managers on Chinese acquiring company managers through providing information and explanation, fitting Chinese buyers in the Western M&A procedure and offering communication. It also helps to build affect-based trust through bridging the divergence of trust orientation and filling the cultural voids. Meanwhile, the invisible integration helps to build cognition-based trust through maintaining the core business, offering great help to acquired companies for their business expansion and selecting the business collaboration areas in the long term. It also helps to build affect-based trust through granting a high degree of governance independence and enabling a balanced status in acquired companies. Originality/value This research unveils the “black box” of Chinese reverse M&As from an inter-personal trust perspective and advances the nuanced understanding of trust and trust-building practices in Chinese reverse M&As. It also provides practical tools for both Chinese companies and acquired companies in developed countries.


2020 ◽  
Vol ahead-of-print (ahead-of-print) ◽  
Author(s):  
Sophia D. Arabadjis ◽  
Erin E. Sullivan

PurposeElectronic Health Records (EHRs) and other Health Information Technologies (HITs) pose significant challenges for clinicians, administrators and managers in the field of primary care. While there is an abundance of literature on the challenges of HIT systems in primary care, there are also practices where HITs are well-integrated and useful for care delivery. This study aims to (1) understand how exemplary primary care practices conceptualized data and HIT system use in their care delivery and (2) describe components that support and promote data and HIT system use in care delivery.Design/methodology/approachThis paper is a sub-analysis of a larger qualitative data set on exemplary primary care in which data was collected using in-depth interviews, observations, field notes and primary source documents from week-long site visits at each organization. Using a combination of qualitative analysis methods including elements of thematic analysis, discourse analysis, and qualitative comparison analysis, we examined HIT-related data across six exemplary primary care organizations.FindingsThree key components were identified that underlie engagement with data and HIT systems: data audience identification, defined data purpose and structures for participation in both data design and maintenance.Originality/valueWithin the context of primary care, these findings have implications for effective integration of HIT systems into primary care delivery.


2018 ◽  
Vol 14 (2) ◽  
pp. 233-258 ◽  
Author(s):  
Efthimia Mavridou ◽  
Konstantinos M. Giannoutakis ◽  
Dionysios Kehagias ◽  
Dimitrios Tzovaras ◽  
George Hassapis

Purpose Semantic categorization of Web services comprises a fundamental requirement for enabling more efficient and accurate search and discovery of services in the semantic Web era. However, to efficiently deal with the growing presence of Web services, more automated mechanisms are required. This paper aims to introduce an automatic Web service categorization mechanism, by exploiting various techniques that aim to increase the overall prediction accuracy. Design/methodology/approach The paper proposes the use of Error Correcting Output Codes on top of a Logistic Model Trees-based classifier, in conjunction with a data pre-processing technique that reduces the original feature-space dimension without affecting data integrity. The proposed technique is generalized so as to adhere to all Web services with a description file. A semantic matchmaking scheme is also proposed for enabling the semantic annotation of the input and output parameters of each operation. Findings The proposed Web service categorization framework was tested with the OWLS-TC v4.0, as well as a synthetic data set with a systematic evaluation procedure that enables comparison with well-known approaches. After conducting exhaustive evaluation experiments, categorization efficiency in terms of accuracy, precision, recall and F-measure was measured. The presented Web service categorization framework outperformed the other benchmark techniques, which comprise different variations of it and also third-party implementations. Originality/value The proposed three-level categorization approach is a significant contribution to the Web service community, as it allows the automatic semantic categorization of all functional elements of Web services that are equipped with a service description file.


2017 ◽  
Vol 51 (1) ◽  
pp. 75-100 ◽  
Author(s):  
Adrian Burton ◽  
Hylke Koers ◽  
Paolo Manghi ◽  
Sandro La Bruzzo ◽  
Amir Aryani ◽  
...  

Purpose Research data publishing is today widely regarded as crucial for reproducibility, proper assessment of scientific results, and as a way for researchers to get proper credit for sharing their data. However, several challenges need to be solved to fully realize its potential, one of them being the development of a global standard for links between research data and literature. Current linking solutions are mostly based on bilateral, ad hoc agreements between publishers and data centers. These operate in silos so that content cannot be readily combined to deliver a network graph connecting research data and literature in a comprehensive and reliable way. The Research Data Alliance (RDA) Publishing Data Services Working Group (PDS-WG) aims to address this issue of fragmentation by bringing together different stakeholders to agree on a common infrastructure for sharing links between datasets and literature. The paper aims to discuss these issues. Design/methodology/approach This paper presents the synergic effort of the RDA PDS-WG and the OpenAIRE infrastructure toward enabling a common infrastructure for exchanging data-literature links by realizing and operating the Data-Literature Interlinking (DLI) Service. The DLI Service populates and provides access to a graph of data set-literature links (at the time of writing close to five million, and growing) collected from a variety of major data centers, publishers, and research organizations. Findings To achieve its objectives, the Service proposes an interoperable exchange data model and format, based on which it collects and publishes links, thereby offering the opportunity to validate such common approach on real-case scenarios, with real providers and consumers. Feedback of these actors will drive continuous refinement of the both data model and exchange format, supporting the further development of the Service to become an essential part of a universal, open, cross-platform, cross-discipline solution for collecting, and sharing data set-literature links. Originality/value This realization of the DLI Service is the first technical, cross-community, and collaborative effort in the direction of establishing a common infrastructure for facilitating the exchange of data set-literature links. As a result of its operation and underlying community effort, a new activity, name Scholix, has been initiated involving the technological level stakeholders such as DataCite and CrossRef.


Facilities ◽  
2014 ◽  
Vol 32 (5/6) ◽  
pp. 295-306 ◽  
Author(s):  
Arnt O. Hopland

Purpose – The purpose of this paper is to investigate the link between technical school building conditions and student satisfaction with the school buildings. Learning more about the relationship between the measures will be useful for researchers who are studying the effect from physical work conditions on student achievement. Design/methodology/approach – The paper aims to study the correlation between technical condition and user satisfaction with school buildings using two different data sources. The first source is administrative data, where the local governments have reported the condition of their school buildings to a national investigation of school building conditions. The second source is survey data where students in Norwegian primary schools report their satisfaction with their learning environment, including the school buildings. Combining the two data sources provides a unique data set for a large number of Norwegian primary schools. Findings – The measures of technical and subjective condition are significantly correlated, but the correlation is far from 100 percent. Hence, it will be of great interest for researchers to look more into potential effects from subjective measures of building condition. Originality/value – The paper provides an investigation of the link between two different measures of building conditions that can both be relevant to use in studies of how school buildings affect student performance.


2018 ◽  
Vol 52 (3) ◽  
pp. 405-423 ◽  
Author(s):  
Riccardo Albertoni ◽  
Monica De Martino ◽  
Paola Podestà

Purpose The purpose of this paper is to focus on the quality of the connections (linkset) among thesauri published as Linked Data on the Web. It extends the cross-walking measures with two new measures able to evaluate the enrichment brought by the information reached through the linkset (lexical enrichment, browsing space enrichment). It fosters the adoption of cross-walking linkset quality measures besides the well-known and deployed cardinality-based measures (linkset cardinality and linkset coverage). Design/methodology/approach The paper applies the linkset measures to the Linked Thesaurus fRamework for Environment (LusTRE). LusTRE is selected as testbed as it is encoded using a Simple Knowledge Organisation System (SKOS) published as Linked Data, and it explicitly exploits the cross-walking measures on its validated linksets. Findings The application on LusTRE offers an insight of the complementarities among the considered linkset measures. In particular, it shows that the cross-walking measures deepen the cardinality-based measures analysing quality facets that were not previously considered. The actual value of LusTRE’s linksets regarding the improvement of multilingualism and concept spaces is assessed. Research limitations/implications The paper considers skos:exactMatch linksets, which belong to a rather specific but a quite common kind of linkset. The cross-walking measures explicitly assume correctness and completeness of linksets. Third party approaches and tools can help to meet the above assumptions. Originality/value This paper fulfils an identified need to study the quality of linksets. Several approaches formalise and evaluate Linked Data quality focusing on data set quality but disregarding the other essential component: the connection among data.


2021 ◽  
Vol ahead-of-print (ahead-of-print) ◽  
Author(s):  
Susanne Zimmermann-Janschitz ◽  
Simon Landauer ◽  
Sebastian Drexel ◽  
Jana Obermeier

Purpose The study aims to promote independent mobility for persons with visual impairment or legal blindness (VIB) by developing a Web-based wayfinding application using geographic information systems (GIS). While the literature mainly focuses on technical devices presenting results for wayfinding, a lack of integration of user needs is identified. The inclusive, participative developed application offers step-by-step directions for pre-trip planning through an accessible user interface. Design/methodology/approach The paper presents a semi-automated approach to extract a pedestrian routing network data set based on open government data and field survey. User profiles calculate different routes using a weighting scheme for landmarks, orientation hints, infrastructure of crossings and sidewalks. The adoption of ArcGIS Web AppBuilder widgets allows access of the user interface additionally through keyboard-only navigation and therefore screen-reader capability. Findings GIS offers a powerful tool to design network analysis for persons with VIB. The routing algorithm accesses different user profiles, returning individualized turn-by-turn directions. The complex set of attributes, including shorelines, landmarks and barriers, can be integrated by semi-automated processes. Practical implications The paper illustrates the benefit of GIS applications for wayfinding of persons with VIB to raise self-determination and independence. Originality/value A ubiquitous pedestrian sidewalk network for a medium-size city comprises a novelty, as research has mainly focused on small areas. The integration of shorelines next to a various number of hints, landmarks and potential barriers through semi-automated processes allows reproducibility and transferability of the model to other cities.


2021 ◽  
Vol ahead-of-print (ahead-of-print) ◽  
Author(s):  
Himanshu Sharma ◽  
Anu G. Aggarwal

Purpose Nowadays, various hotels and third party websites allow guests to express their stay experience in the form of textual content and ratings termed as user-generated content (UGC). This study aims to explore the influence of UGC along with the financial aspect on the sales of the hotel. This will help them in making efficient business decisions and revenue generation by realizing the requirements of the guests. The proposed model provides an insight into the theoretical and practical significance of the concerned explanatory variables to the hoteliers. Design/methodology/approach This paper considers the number of rooms, six aspect ratings (room, cleanliness, location, service, value and sleep quality), review length and readability as the independent variables. Revenue per available room is taken as the dependent variable. Log-linear regression analysis is performed on a data set of 78 hotels situated in Delhi National Capital Region to validate the relationships. Moreover, the differential impact of hotel type on these exploratory variables is studied. Findings Research findings show that along with the financial aspect, the UGC components also play a key role in generating sales for the hotels. It was further observed that the two hotel categories, i.e. luxury and budget have different natures and also the characteristics of luxury hotels overshadow those of budget. Originality/value This study uses the textual content of the reviews along with the numerical ratings. This is a unique combination for studying sales of hotels according to the knowledge of authors, where earlier studies focused only on the financial aspects.


2021 ◽  
Vol ahead-of-print (ahead-of-print) ◽  
Author(s):  
Valentino Moretto ◽  
Gianluca Elia ◽  
Gianpaolo Ghiani

Purpose Differently from traditional approaches that rely on the analysis of single dimensions of the tourism phenomenon, this study aims to experiment a systemic approach based on structured and unstructured data sources to elaborate a composite index to measure the tourist competitiveness of marginal areas, with the final aim to design and plan proper socio-economic development strategies. Design/methodology/approach The methodology adopted to carry out the study follows a four-step process and relies on indicators that are both relevant and accessible. The first step concerns the analysis of the literature about the existing approaches to calculate a tourism index. The second step concerns the definition of the indicators and the collection of data by using both structured and unstructured sources. The third step focuses on the population of the data set. Finally, the fourth step aims at calculating the tourism index through a composite-based methodology and using it for a pilot application in a Southern Italy province. Findings The study calculates a synthetic tourism index for each of the 97 municipalities of the Province of Lecce (a city located in the southeast of Italy). The proposed index combines administrative, institutional and open data sources to derive a single indicator for each municipality, thus supporting decision-makers in understanding the complex reality and competitiveness level of territories in the tourism industry. Originality/value The main elements of originality of the study are the breadth and typology of data sources considered to calculate the composite indicator of tourism competitiveness (both structured and unstructured); and the use of weighting and aggregation procedures in the methodological issues.


Sign in / Sign up

Export Citation Format

Share Document