Automated brain tumor segmentation from multimodal MRI data based on Tamura texture feature and an ensemble SVM classifier

2019 ◽  
Vol 12 (4) ◽  
pp. 466-480
Author(s):  
Li Na ◽  
Xiong Zhiyong ◽  
Deng Tianqi ◽  
Ren Kai
Keyword(s):  
Brain Tumor ◽  
Brain Tumors ◽  
Superior Performance ◽  
Support Vector ◽  
Svm Classifier ◽  
Data Set ◽  
Original Solution ◽  
Content Type ◽  
Tumor Region ◽  
The Brain

Purpose The precise segmentation of brain tumors is the most important and crucial step in their diagnosis and treatment. Due to the presence of noise, uneven gray levels, blurred boundaries and edema around the brain tumor region, the brain tumor image has indistinct features in the tumor region, which pose a problem for diagnostics. The paper aims to discuss these issues. Design/methodology/approach In this paper, the authors propose an original solution for segmentation using Tamura Texture and ensemble Support Vector Machine (SVM) structure. In the proposed technique, 124 features of each voxel are extracted, including Tamura texture features and grayscale features. Then, these features are ranked using the SVM-Recursive Feature Elimination method, which is also adopted to optimize the parameters of the Radial Basis Function kernel of SVMs. Finally, the bagging random sampling method is utilized to construct the ensemble SVM classifier based on a weighted voting mechanism to classify the types of voxel. Findings The experiments are conducted over a sample data set to be called BraTS2015. The experiments demonstrate that Tamura texture is very useful in the segmentation of brain tumors, especially the feature of line-likeness. The superior performance of the proposed ensemble SVM classifier is demonstrated by comparison with single SVM classifiers as well as other methods. Originality/value The authors propose an original solution for segmentation using Tamura Texture and ensemble SVM structure.

Deep learning-based approach for segmentation of glioma sub-regions in MRI

2020 ◽  
Vol 13 (4) ◽  
pp. 389-406
Author(s):  
Jiten Chaudhary ◽  
Rajneesh Rani ◽  
Aman Kamboj
Keyword(s):  
Deep Learning ◽  
Brain Tumor ◽  
Data Augmentation ◽  
Treatment Plan ◽  
Superior Performance ◽  
Content Type ◽  
Proposed Model ◽  
Life Threatening ◽  
Tumor Region ◽  
Magnetic Resonance Imaging Mri

PurposeBrain tumor is one of the most dangerous and life-threatening disease. In order to decide the type of tumor, devising a treatment plan and estimating the overall survival time of the patient, accurate segmentation of tumor region from images is extremely important. The process of manual segmentation is very time-consuming and prone to errors; therefore, this paper aims to provide a deep learning based method, that automatically segment the tumor region from MR images.Design/methodology/approachIn this paper, the authors propose a deep neural network for automatic brain tumor (Glioma) segmentation. Intensity normalization and data augmentation have been incorporated as pre-processing steps for the images. The proposed model is trained on multichannel magnetic resonance imaging (MRI) images. The model outputs high-resolution segmentations of brain tumor regions in the input images.FindingsThe proposed model is evaluated on benchmark BRATS 2013 dataset. To evaluate the performance, the authors have used Dice score, sensitivity and positive predictive value (PPV). The superior performance of the proposed model is validated by training very popular UNet model in the similar conditions. The results indicate that proposed model has obtained promising results and is effective for segmentation of Glioma regions in MRI at a clinical level.Practical implicationsThe model can be used by doctors to identify the exact location of the tumorous region.Originality/valueThe proposed model is an improvement to the UNet model. The model has fewer layers and a smaller number of parameters in comparison to the UNet model. This helps the network to train over databases with fewer images and gives superior results. Moreover, the information of bottleneck feature learned by the network has been fused with skip connection path to enrich the feature map.

Human motion analysis from UAV video

2018 ◽  
Vol 6 (2) ◽  
pp. 69-92 ◽  
Author(s):  
Asanka G. Perera ◽  
Yee Wei Law ◽  
Ali Al-Naji ◽  
Javaan Chahl
Keyword(s):  
Temporal Relationship ◽  
Projective Transformation ◽  
Human Motion ◽  
Video Frame ◽  
Support Vector ◽  
Svm Classifier ◽  
Human Motion Analysis ◽  
Data Set ◽  
Content Type ◽  
Classifier Selection

Purpose The purpose of this paper is to present a preliminary solution to address the problem of estimating human pose and trajectory by an aerial robot with a monocular camera in near real time. Design/methodology/approach The distinguishing feature of the solution is a dynamic classifier selection architecture. Each video frame is corrected for perspective using projective transformation. Then, a silhouette is extracted as a Histogram of Oriented Gradients (HOG). The HOG is then classified using a dynamic classifier. A class is defined as a pose-viewpoint pair, and a total of 64 classes are defined to represent a forward walking and turning gait sequence. The dynamic classifier consists of a Support Vector Machine (SVM) classifier C64 that recognizes all 64 classes, and 64 SVM classifiers that recognize four classes each – these four classes are chosen based on the temporal relationship between them, dictated by the gait sequence. Findings The solution provides three main advantages: first, classification is efficient due to dynamic selection (4-class vs 64-class classification). Second, classification errors are confined to neighbors of the true viewpoints. This means a wrongly estimated viewpoint is at most an adjacent viewpoint of the true viewpoint, enabling fast recovery from incorrect estimations. Third, the robust temporal relationship between poses is used to resolve the left-right ambiguities of human silhouettes. Originality/value Experiments conducted on both fronto-parallel videos and aerial videos confirm that the solution can achieve accurate pose and trajectory estimation for these different kinds of videos. For example, the “walking on an 8-shaped path” data set (1,652 frames) can achieve the following estimation accuracies: 85 percent for viewpoints and 98.14 percent for poses.

scholarly journals Clustering of Brain Tumors in Brain MRI Images based on Extraction of Textural and Statistical Features

2020 ◽  
Vol 16 (12) ◽  
pp. 116
Author(s):  
Hamed Samadi Ghoushchi ◽  
Yaghoub Pourasad
Keyword(s):  
Magnetic Resonance Imaging ◽  
Brain Tumor ◽  
Magnetic Resonance ◽  
Brain Tumors ◽  
Imaging Techniques ◽  
Brain Mri ◽  
Support Vector ◽  
Statistical Features ◽  
Resonance Imaging ◽  
The Brain

<p>The purpose of this article is to investigate techniques for classifying tumor grade from magnetic resonance imaging (MRI). This requires early diagnosis of the brain tumor and its grade. Magnetic resonance imaging may show a clear tumor in the brain, but doctors need to measure the tumor in order to treat more or to advance treatment. For this purpose, digital imaging techniques along with machine learning can help to quickly identify tumors and also treatments and types of surgery. These combined techniques in understanding medical images for researchers are an important tool to increase the accuracy of diagnosis. In this paper, classification methods for MRI images of tumors of the human brain are performed to review the astrocytoma-containing glands. Methods used to classify brain tumors, including preprocessing, screening, tissue extraction, and statistical features of the tumor using two types of T<sub>1</sub>W and Flair brain MRI images and also the method of dimensionality reduction of extracted features and how to train them in classification are also explained. Determine the tumor area using three classification of Fuzzy Logic <em>C</em><em>-</em><em>Means</em><em> </em>Clustering (FCM), Probabilistic Neural Networks (PNN) and Support Vector Machines (SVM). In this paper, simulated and real MRI images are used. The results obtained from the proposed methods in this paper are compared with the reference results and the results show that the proposed approach can increase the reliability of brain tumor diagnosis.</p>

scholarly journals Detection of Cross Site Scripting Attack in Wireless Networks Using n-Gram and SVM

2012 ◽  
Vol 8 (3) ◽  
pp. 275-286 ◽  
Author(s):  
Jun-Ho Choi ◽  
Chang Choi ◽  
Byeong-Kyu Ko ◽  
Pan-Koo Kim
Keyword(s):  
Malicious Code ◽  
Superior Performance ◽  
Support Vector ◽  
Svm Classifier ◽  
Data Set ◽  
Sql Injection ◽  
Index Term ◽  
N Gram ◽  
Cross Site ◽  
The Web

Large parts of attacks targeting the web are aiming at the weak point of web application. Even though SQL injection, which is the form of XSS (Cross Site Scripting) attacks, is not a threat to the system to operate the web site, it is very critical to the places that deal with the important information because sensitive information can be obtained and falsified. In this paper, the method to detect themalicious SQL injection script code which is the typical XSS attack using n-Gram indexing and SVM (Support Vector Machine) is proposed. In order to test the proposed method, the test was conducted after classifying each data set as normal code and malicious code, and the malicious script code was detected by applying index term generated by n-Gram and data set generated by code dictionary to SVM classifier. As a result, when the malicious script code detection was conducted using n-Gram index term and SVM, the superior performance could be identified in detecting malicious script and the more improved results than existing methods could be seen in the malicious script code detection recall.

Brain-tumor imaging using radiopaque perfluorocarbon

1983 ◽  
Vol 58 (5) ◽  
pp. 650-653 ◽  
Author(s):  
Nicholas J. Patronas ◽  
Javad Hekmatpanah ◽  
Kunio Doi
Keyword(s):  
Brain Tumor ◽  
Brain Tumors ◽  
Contrast Agent ◽  
Contrast Medium ◽  
Computerized Tomography ◽  
Tumor Imaging ◽  
Content Type ◽  
X Ray ◽  
The Brain ◽  
Fine Print

✓ Perfluorocarbon, a new tumor-seeking x-ray contrast agent, was injected into three rats with experimental brain tumors. After 1 to 3 days the rats were sacrificed, and the brains were removed and subjected to x-ray study. All showed dense radiopaque areas which correlated with the size and shape of the corresponding brain tumors. Conversely, none of the radiograms taken of the brain tumor in five rats receiving no perfluorocarbon (control animals) showed similar increased density. These findings suggest that perfluorocarbon may serve a useful role as a contrast medium for computerized tomography studies of brain tumors in man.

scholarly journals Hybrid-Approach-Based Feature Selection for Magnetic Reverberation Imaging Brain Tumor Classification

2020 ◽  
Vol 55 (2) ◽  
Author(s):  
Amjad Mahmood Hadi ◽  
Gesoon Jawid A.K. Al-Abass ◽  
Firas Faeq K. Hussain
Keyword(s):  
Feature Selection ◽  
Brain Tumor ◽  
Brain Tumors ◽  
Naive Bayes ◽  
Naïve Bayes ◽  
Support Vector ◽  
Classification Algorithms ◽  
Data Set ◽  
The World ◽  
Mri Image

The World Health Organization reported that the brain tumor is one of the serious diseases because it affects a large number of people including children around the world. Developing a system to detect brain tumors at an early stage would help save the lives of many people. Much research has been made in this area to develop a system for detecting brain tumors, but this system needs to be improved, its accuracy enhanced and the time taken for the classification of brain tumors reduced. Thus, feature selection methods are required to enhance the system. The feature selection method is more significant in the data mining algorithm to remove redundant features from the data set. In this paper, I proposed a hybrid Principal Component Analysis and Rough Set theory (PCA + RST) approach to reduce the dimension of the data set. The approach is evaluated using ADNT and OASIS standard databases. Two segmentation methods were applied to find out the region of interest from the MRI image. To obtain several features from an MRI image, the Discrete Wavelet Transform (DWT) methods are employed. The novelty of the proposed new hybrid PCA+RST approach is to obtain the most significant features for enhancing the classification algorithms. Four classification algorithms namely J48, Support Vector Machine (SVM), K-nearest neighbor (KNN) and Naive Bayes have been implemented. Evaluation and comparison of the proposed approach with alternative approaches like DWT+SVM, DWT+PCA+ANN, DWT+PCA+KNN, STRSPOS-QR+J48, and STRSPOS-QR+Naive Bayes are presented. The proposed approach outperforms both these approaches.

scholarly journals Automated brain tumor classification using various deep learning models: a comparative study

2021 ◽  
Vol 22 (1) ◽  
pp. 252
Author(s):  
Alaa Ahmed Abbood ◽  
Qahtan Makki Shallal ◽  
Mohammed Abdulraheem Fadhel
Keyword(s):  
Deep Learning ◽  
Brain Tumor ◽  
Brain Tumors ◽  
Comparative Study ◽  
Processing Time ◽  
Processing Unit ◽  
Automated Classification ◽  
Learning Models ◽  
Tumor Region ◽  
The Brain

The brain tumor, the most common and aggressive disease, leads to a very shorter lifespan. Thus, planning treatments is a crucial step in improving a patient's quality of life. In general, several image techniques such as CT, MRI, and ultrasound have been used for assessing tumors in the prostate, breast, lung, brain, etc. Primarily, MRI images are applied to detect tumors in the brain during this work. The enormous amount of data produced by the MRI scan thwarts tumor vs. non-tumor manual classification at a particular time. Unfortunately, with a small number of images, it has certain limitations (i.e., precise quantitative measurements). Therefore, an automated classification system is necessary to avoid human mortality. The automatic categorization of brain tumors in the surrounding tumor region is a challenging task concerning space and structural variability. Four deep learning models: AlexNet, VGG16, GoogleNet, and RestNet50, are used in this comparative study to classify brain tumors. Based on accuracy, the results showed that RestNet50 is the best model with an accuracy of 95.8%, while AlexNet has the fast performance with a processing time of 1.2 seconds. In addition, a hardware parallel processing unit (GPU) is employed for real-time purposes, where AlexNet (the fastest model) has a processing time of only 8.3 msec.

Brain Segmentation Using Deep Neural Networks

2020 ◽  
Vol 10 ◽  
Author(s):  
Vandana Mohindru ◽  
Ashutosh Sharma ◽  
Apurv Mathur ◽  
Anuj Kumar Gupta
Keyword(s):  
Neural Networks ◽  
Brain Tumor ◽  
Brain Tumors ◽  
Convolutional Neural Networks ◽  
Research Work ◽  
Tumor Segmentation ◽  
Svm Classifier ◽  
Deep Convolutional Neural Networks ◽  
Brain Tumor Segmentation ◽  
The Brain

Background: The determination of tumor extent is a major challenging task in brain tumor planning and quantitative evaluation. Magnetic Resonance Imaging (MRI) is one of the non-intellectual technique has emerged as a front- line diagnostic tool for a brain tumor with non-ionizing radiation. <P> Objectives: In Brain tumors, Gliomas is the very basic tumor of the brain; they might be less aggressive or more aggressive in a patient with a life expectancy of not more than 2 years. Manual segmentation is time-consuming so we use a deep convolutional neural network to increase the performance is highly dependent on the operator&#039;s experience. <P> Methods: This paper proposed a fully automatic segmentation of brain tumors using deep convolutional neural networks. Further, it uses high-grade gliomas brain images from BRATS 2016 database. The suggested work achieve brain tumor segmentation using tensor flow, in which the anaconda frameworks are used to execute high-level mathematical functions. <P> Results: Hence, the research work segments brain tumors into four classes like edema, non-enhancing tumor, enhancing tumor and necrotic tumor. Brain tumor segmentation needs to separate healthy tissues from tumor regions such as advancing tumor, necrotic core, and surrounding edema. We have presented a process to segment 3D MRI image of a brain tumor into healthy and area where the tumor is present, including their separate sub-areas. We have applied an SVM based classification. Categorization is complete using a soft-margin SVM classifier. <P> Conclusion: We are using deep convolutional neural networks for presenting the brain tumor segmentation. Outcomes of the BRATS 2016 online judgment method assure us to increase the performance, accuracy, and speed with our best model. The fuzzy c-mean algorithm provides better accuracy and train on the SVM based classifier. We can achieve the finest performance and accuracy by using the novel two-pathway architecture i.e. encoder and decoder as well as the modeling local label that depends on stacking two CNN's

Brain Tumor Detection via Asymmetry Quantification across Mid Sagittal Plane

2020 ◽  
Vol 13 ◽  
Author(s):  
Shoaib Amin Banday ◽  
Mohammad Khalid Pandit
Keyword(s):  
Brain Tumor ◽  
Brain Tumors ◽  
Sagittal Plane ◽  
Early Stage ◽  
Imaging Techniques ◽  
Complex Structure ◽  
Magnetic Resonance Images ◽  
Absolute Difference ◽  
Brain Hemispheres ◽  
The Brain

Introduction: Brain tumor is among the major causes of morbidity and mortality rates worldwide. According to National Brain Tumor Foundation (NBTS), the death rate has nearly increased by as much as 300% over last couple of decades. Tumors can be categorized as benign (non-cancerous) and malignant (cancerous). The type of the brain tumor significantly depends on various factors like the site of its occurrence, its shape, the age of the subject etc. On the other hand, Computer Aided Detection (CAD) has been improving significantly in recent times. The concept, design and implementation of these systems ascend from fairly simple ones to computationally intense ones. For efficient and effective diagnosis and treatment plans in brain tumor studies, it is imperative that an abnormality is detected at an early stage as it provides a little more time for medical professionals to respond. The early detection of diseases has predominantly been possible because of medical imaging techniques developed from past many decades like CT, MRI, PET, SPECT, FMRI etc. The detection of brain tumors however, has always been a challenging task because of the complex structure of the brain, diverse tumor sizes and locations in the brain. Method: This paper proposes an algorithm that can detect the brain tumors in the presence of the Radio-Frequency (RF) inhomoginiety. The algorithm utilizes the Mid Sagittal Plane as a landmark point across which the asymmetry between the two brain hemispheres is estimated using various intensity and texture based parameters. Result: The results show the efficacy of the proposed method for the detection of the brain tumors with an acceptable detection rate. Conclusion: In this paper, we have calculated three textural features from the two hemispheres of the brain viz: Contrast (CON), Entropy (ENT) and Homogeneity (HOM) and three parameters viz: Root Mean Square Error (RMSE), Correlation Co-efficient (CC), and Integral of Absolute Difference (IAD) from the intensity distribution profiles of the two brain hemispheres to predict any presence of the pathology. First a Mid Sagittal Plane (MSP) is obtained on the Magnetic Resonance Images that virtually divides brain into two bilaterally symmetric hemispheres. The block wise texture asymmetry is estimated for these hemispheres using the above 6 parameters.

scholarly journals An improved framework for brain tumor analysis using MRI based on YOLOv2 and convolutional neural network

2021 ◽  
Author(s):  
Muhammad Irfan Sharif ◽  
Jian Ping Li ◽  
Javeria Amin ◽  
Abida Sharif
Keyword(s):  
Brain Tumor ◽  
Tumor Detection ◽  
Entropy Method ◽  
Feature Extraction And Selection ◽  
Tumor Region ◽  
Selection For ◽  
Magnetic Resonance Imaging Mri ◽  
The Brain ◽  
Complicated Task

AbstractBrain tumor is a group of anomalous cells. The brain is enclosed in a more rigid skull. The abnormal cell grows and initiates a tumor. Detection of tumor is a complicated task due to irregular tumor shape. The proposed technique contains four phases, which are lesion enhancement, feature extraction and selection for classification, localization, and segmentation. The magnetic resonance imaging (MRI) images are noisy due to certain factors, such as image acquisition, and fluctuation in magnetic field coil. Therefore, a homomorphic wavelet filer is used for noise reduction. Later, extracted features from inceptionv3 pre-trained model and informative features are selected using a non-dominated sorted genetic algorithm (NSGA). The optimized features are forwarded for classification after which tumor slices are passed to YOLOv2-inceptionv3 model designed for the localization of tumor region such that features are extracted from depth-concatenation (mixed-4) layer of inceptionv3 model and supplied to YOLOv2. The localized images are passed toMcCulloch'sKapur entropy method to segment actual tumor region. Finally, the proposed technique is validated on three benchmark databases BRATS 2018, BRATS 2019, and BRATS 2020 for tumor detection. The proposed method achieved greater than 0.90 prediction scores in localization, segmentation and classification of brain lesions. Moreover, classification and segmentation outcomes are superior as compared to existing methods.

Sign in / Sign up

Export Citation Format

Share Document