INTRINSIC VISCOSITY OF OVOMUCOID IN RANDOM COIL CONFORMATION

2009 ◽  
Vol 7 (5) ◽  
pp. 417-421 ◽  
Author(s):  
Faizan Ahmad ◽  
A. Salahuddin
1958 ◽  
Vol 36 (11) ◽  
pp. 1584-1595 ◽  
Author(s):  
A. E. Leger ◽  
J. C. Hyde ◽  
H. Sheffer

A light-scattering study of aluminum distearate in dilute benzene solution suggests that it is a linear molecule of random coil shape. This is further substantiated by intrinsic viscosity – molecular weight data, the constancy of the ratio of the molecular weight to the square of the radius of gyration (Rg), the value of Φ in Flory's intrinsic viscosity – molecular weight relationship, and the close agreement between the theoretical and experimental results found for the unit length of the polymer chain. This average unit length has been calculated to be 4.46 Å.


2021 ◽  
Vol 11 (4) ◽  
pp. 12068-12081

This study aimed to determine the effect of different substitution levels of cress seed gum (CSG, 0-15%) and sucrose (SUC, 0-10%) on the dilute solution properties of native wheat starch (NWS) in terms of intrinsic viscosity, Huggins constant, power-law model slope, berry number, master curve slope, critical concentration, shape factor, and swollen specific volume. In the presence of CSG, the intrinsic viscosity of NWS increased from 0.686 to 0.760 dl/g, the molecular conformation changed from random coil to rod-like, the specific swollen volume enhanced from 0.27 to 0.32 dl/g and the shape factor altered from spherical to prolate. In contrast, sucrose reduced the intrinsic viscosity of NWS to 0.379 dl/g and the specific swollen volume to 0.15 dl/g, altered the conformation to a more random coil and the shape factor to a more compact sphere. In the ternary system, the parameters were close to those of the starch-gum mixture. It can be concluded that CSG overcame the weakening effect of SUC on the NWS solution properties in the ternary system.


1978 ◽  
Vol 171 (1) ◽  
pp. 89-97 ◽  
Author(s):  
Masroor A. Baig ◽  
A. Salahuddin

Reversible unfolding of ovomucoid by guanidine hydrochloride, as followed by viscosity and difference-spectral measurements at 25°C, pH6, occurred in two distinct steps involving at least three major conformational states, namely the native, intermediate and completely denatured states, occurring respectively in 60mm-sodium phosphate buffer, 3.5m-guanidine hydrochloride and 6m-guanidine hydrochloride. The overall native conformation of ovomucoid, as indicated by its intrinsic viscosity (5.24ml/g) and gel-filtration behaviour, differs significantly from that of a typical globular protein. Exposures of tyrosine residues in native ovomucoid measured by difference spectroscopy following perturbation with glycerol, ethylene glycol and dimethyl sulphoxide were, respectively, 0.42, 0.56 and 0.57. Of the exposed phenolic groups only one titrated normally (pKint., 9.91, electrostatic-interaction factor, w, 0.04). Results on difference spectra, solvent perturbation, phenolic titration and intrinsic viscosity (7.4ml/g) taken together showed that, although ovomucoid in 3.5m-guanidine hydrochloride was significantly unfolded, it retained a degree of native structure, removable with 6m-guanidine hydrochloride. In the latter, all the six tyrosine residues were available for titration, and the intrinsic viscosity of ovomucoid increased to 9.4ml/g. Furthermore, the characteristic fine structures in circular-dichrosim spectra of ovomucoid, associated with the elements of native structure, were abolished in 6m-guanidine hydrochloride, suggesting that the completely denatured state is structureless and presumably behaves as a cross-linked random coil. The latter state has been shown by analysis of the results on guanidine hydrochloride-dependence of the transition, intermediate⇌denatured, to be less stable than the intermediate state under native conditions by about 46kJ/mol at 25°C. Attempts have been made to interpret the above results in the light of available information on the amino acid sequence of ovomucoid.


2021 ◽  
Author(s):  
Zahra Zamani ◽  
Seyed Mohammad Ali Razavi

Abstract This research focused to determine some molecular properties of Nettle seed gum (NSG), as one of novel and natural source of hydrocolloids, at various temperatures (10, 25, 40, 55, and 70°C) in the dilute region. The results displayed that among the models studied, the Higiro 2 model with highest R2 and lowest RMSE values was the most proper model for determining the intrinsic viscosity of the NSG. According to this model, the intrinsic viscosity value of NSG was obtained in the range of 0.15–0.21 dl/g. It was also revealed that, as the temperature raised, the intrinsic viscosity of NSG declined. The shape factor of NSG at 40°C was spherical, however, with increasing the temperature from 40°C to 70°C, it was changed to an ellipsoidal shape. Berry number and master curve slope revealed that NSG solution at all temperatures was within the dilute regime and that no molecular entanglements were present. The parameter b values acquired for NSG at the intended temperatures showed that the molecular conformation of NSG was random coil. The activation energy and chain flexibility parameter calculated for NSG at the studied temperatures were 0.488×107 J/kgmol and 587.2, respectively.


1979 ◽  
Vol 57 (8) ◽  
pp. 1090-1092 ◽  
Author(s):  
Faizan Ahmad ◽  
Peter McPhie

The irreversible unfolding of covalently inhibited swine pepsin by urea was studied by spectrophotometric and viscosity measurements. At pH 4.5 and 25 °C in 8 M urea, a stable intermediate form of the protein was detected. It differed from the native protein by a slight loss of secondary structure and an increased intrinsic viscosity ([η] = 7.5 mL g−1), indicating the intermediate to have an increased molecular volume or to be more asymmetric in shape. The protein was transformed into a random coil form by increases of temperature and pH. Comparison with other results suggested that at pH 6 pepsin is less stable than its inactive precursor, pepsinogen, by about 3 Kcal mol−1 (1 cal = 4.187 J).


1969 ◽  
Vol 21 (03) ◽  
pp. 428-440 ◽  
Author(s):  
N. O Solum ◽  
S Łopaciuk

Summary1. Some properties of purified bovine platelet fibrinogen have been described and the data compared to those obtained by parallel analysis of purified bovine plasma fibrinogen.2. A close similarity was found between platelet and plasma fibrinogen as to sedimentation coefficients, electrophoretic mobilities in starch gel and polyacrylamide disc electrophoresis, light absorption spectra in the range 240 mμ to 330 mμ, ability to form immunoprecipitate with a rabbit antiserum against bovine plasma fibrinogen, total amino acid composition and in N-terminal amino acids.Differences between the fibrinogens were found as to intrinsic viscosity, carbohydrate content and behaviour upon clotting by thrombin. Intrinsic viscosity in 0.3 M NaCl at 25° was 0.48 dl/g for platelet fibrinogen as compared to 0.26 dl/g for plasma fibrinogen. The carbohydrate content of platelet fibrinogen was 0.56 ± 0.10% 1.56±0.10% and 1.37±0.09% for sialic acid (calculated as N-glycolyl neuraminic acid), hexose (galactose/mannose 1:2) and hexosamine (glucosamine), respectively. These values were 6, 54 and 26% higher than those found for plasma fibrinogen. The difference in clotting behaviour indicated a slower polymerization rate of the fibrin monomers formed from platelet fibrinogen than of those formed from plasma fibrinogen.


TAPPI Journal ◽  
2015 ◽  
Vol 14 (11) ◽  
pp. 689-694
Author(s):  
QINGZHI MA ◽  
QI WANG ◽  
CHU WANG ◽  
NIANJIE FENG ◽  
HUAMIN ZHAI

The effect of oxygen (O2)-delignified pine kraft pulp pretreatment by high-purity, thermostable, and alkaline-tolerant xylanases on elemental chlorine free (ECF) bleaching of O2-delignification kraft pulp was studied. The study found that xylanase pretreatment preserved the intrinsic viscosity and yield of O2-delignified pulp while causing about 7% of delignification with high delignification selectivity. The xylanases with high purity, higher thermostability (75°C~80°C) in highly alkaline media (pH 8.0~9.5) could be applied on an industrial scale. Pulp pretreatment by the high-purity, thermostable, and alkaline tolerant xylanases could improve pulp brightness or reduce the chlorine dioxide (ClO2) consumption. In a D0ED1D2 bleaching sequence using the same amount of ClO2, the xylanase-pretreated pulp obtained a higher brightness (88.2% vs. 89.7% ISO) at the enzyme dose of 2 U/g pulp; or for the same brightness as control (88.2% ISO), the ClO2 dosage in the D0 stage was reduced by 27%, which represents a 16% savings in total ClO2 used for bleaching.


2016 ◽  
Vol 10 (2) ◽  
pp. 135-139 ◽  
Author(s):  
Valentina Chernova ◽  
◽  
Angela Shurshina ◽  
Elena Kulish ◽  
Gennady Zaikov ◽  
...  

Some ways of estimating the values of the intrinsic viscosity of chitosan were analyzed. It was shown that the method of Irzhak and Baranov for estimating the current value of the intrinsic viscosity allows to adequately estimates the conformational state of the macromolecular coil and its degree of swelling.


2020 ◽  
Vol 17 (5) ◽  
pp. 438-445
Author(s):  
Van Giau Vo ◽  
Jung-Min Pyun ◽  
Eva Bagyinszky ◽  
Seong S.A. An ◽  
Sang Y. Kim

Background: Presenilin 1 (PSEN1) was suggested as the most common causative gene of early onset Alzheimer’s Disease (AD). Methods: Patient who presented progressive memory decline in her 40s was enrolled in this study. A broad battery of neuropsychological tests and neuroimaging was applied to make the diagnosis. Genetic tests were performed in the patient to evaluate possible mutations using whole exome sequencing. The pathogenic nature of missense mutation and its 3D protein structure prediction were performed by in silico prediction programs. Results: A pathogenic mutation in PSEN1 (NM_000021.3: c.1027T>C p.Ala285Val), which was found in a Korean EOAD patient. Magnetic resonance imaging scan showed mild left temporal lobe atrophy. Hypometabolism appeared through 18F-fludeoxyglucose Positron Emission Tomography (FDG-PET) scanning in bilateral temporal and parietal lobe, and 18F-Florbetaben-PET (FBB-PET) showed increased amyloid deposition in bilateral frontal, parietal, temporal lobe and hence presumed preclinical AD. Protein modeling showed that the p.Ala285Val is located in the random coil region and could result in extra stress in this region, resulting in the replacement of an alanine residue with a valine. This prediction was confirmed previous in vitro studies that the p.Trp165Cys resulted in an elevated Aβ42/Aβ40 ratio in both COS-1 and HEK293 cell lines compared that of wild-type control. Conclusion: Together, the clinical characteristics and the effect of the mutation would facilitate our understanding of PSEN1 in AD pathogenesis for the disease diagnosis and treatment. Future in vivo study is needed to evaluate the role of PSEN1 p.Ala285Val mutation in AD progression.


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