scholarly journals Biogeochemical controls of surface ocean phosphate

2019 ◽  
Vol 5 (8) ◽  
pp. eaax0341 ◽  
Author(s):  
Adam C. Martiny ◽  
Michael W. Lomas ◽  
Weiwei Fu ◽  
Philip W. Boyd ◽  
Yuh-ling L. Chen ◽  
...  

Surface ocean phosphate is commonly below the standard analytical detection limits, leading to an incomplete picture of the global variation and biogeochemical role of phosphate. A global compilation of phosphate measured using high-sensitivity methods revealed several previously unrecognized low-phosphate areas and clear regional differences. Both observational climatologies and Earth system models (ESMs) systematically overestimated surface phosphate. Furthermore, ESMs misrepresented the relationships between phosphate, phytoplankton biomass, and primary productivity. Atmospheric iron input and nitrogen fixation are known important controls on surface phosphate, but model simulations showed that differences in the iron-to-macronutrient ratio in the vertical nutrient supply and surface lateral transport are additional drivers of phosphate concentrations. Our study demonstrates the importance of accurately quantifying nutrients for understanding the regulation of ocean ecosystems and biogeochemistry now and under future climate conditions.

2012 ◽  
Vol 25 (19) ◽  
pp. 6646-6665 ◽  
Author(s):  
John P. Dunne ◽  
Jasmin G. John ◽  
Alistair J. Adcroft ◽  
Stephen M. Griffies ◽  
Robert W. Hallberg ◽  
...  

Abstract The physical climate formulation and simulation characteristics of two new global coupled carbon–climate Earth System Models, ESM2M and ESM2G, are described. These models demonstrate similar climate fidelity as the Geophysical Fluid Dynamics Laboratory’s previous Climate Model version 2.1 (CM2.1) while incorporating explicit and consistent carbon dynamics. The two models differ exclusively in the physical ocean component; ESM2M uses Modular Ocean Model version 4p1 with vertical pressure layers while ESM2G uses Generalized Ocean Layer Dynamics with a bulk mixed layer and interior isopycnal layers. Differences in the ocean mean state include the thermocline depth being relatively deep in ESM2M and relatively shallow in ESM2G compared to observations. The crucial role of ocean dynamics on climate variability is highlighted in El Niño–Southern Oscillation being overly strong in ESM2M and overly weak in ESM2G relative to observations. Thus, while ESM2G might better represent climate changes relating to total heat content variability given its lack of long-term drift, gyre circulation, and ventilation in the North Pacific, tropical Atlantic, and Indian Oceans, and depth structure in the overturning and abyssal flows, ESM2M might better represent climate changes relating to surface circulation given its superior surface temperature, salinity, and height patterns, tropical Pacific circulation and variability, and Southern Ocean dynamics. The overall assessment is that neither model is fundamentally superior to the other, and that both models achieve sufficient fidelity to allow meaningful climate and earth system modeling applications. This affords the ability to assess the role of ocean configuration on earth system interactions in the context of two state-of-the-art coupled carbon–climate models.


2013 ◽  
Vol 41 (3-4) ◽  
pp. 803-817 ◽  
Author(s):  
S. Brands ◽  
S. Herrera ◽  
J. Fernández ◽  
J. M. Gutiérrez

2018 ◽  
Vol 146 (11) ◽  
pp. 3505-3544 ◽  
Author(s):  
Markus Gross ◽  
Hui Wan ◽  
Philip J. Rasch ◽  
Peter M. Caldwell ◽  
David L. Williamson ◽  
...  

Abstract Numerical weather, climate, or Earth system models involve the coupling of components. At a broad level, these components can be classified as the resolved fluid dynamics, unresolved fluid dynamical aspects (i.e., those represented by physical parameterizations such as subgrid-scale mixing), and nonfluid dynamical aspects such as radiation and microphysical processes. Typically, each component is developed, at least initially, independently. Once development is mature, the components are coupled to deliver a model of the required complexity. The implementation of the coupling can have a significant impact on the model. As the error associated with each component decreases, the errors introduced by the coupling will eventually dominate. Hence, any improvement in one of the components is unlikely to improve the performance of the overall system. The challenges associated with combining the components to create a coherent model are here termed physics–dynamics coupling. The issue goes beyond the coupling between the parameterizations and the resolved fluid dynamics. This paper highlights recent progress and some of the current challenges. It focuses on three objectives: to illustrate the phenomenology of the coupling problem with references to examples in the literature, to show how the problem can be analyzed, and to create awareness of the issue across the disciplines and specializations. The topics addressed are different ways of advancing full models in time, approaches to understanding the role of the coupling and evaluation of approaches, coupling ocean and atmosphere models, thermodynamic compatibility between model components, and emerging issues such as those that arise as model resolutions increase and/or models use variable resolutions.


2020 ◽  
Author(s):  
Claude-Michel Nzotungicimpaye ◽  
Andrew H. MacDougall ◽  
Joe R. Melton ◽  
Claire C. Treat ◽  
Michael Eby ◽  
...  

Abstract. Wetlands are the single largest natural source of methane (CH4), a powerful greenhouse gas affecting the global climate. In turn, wetland CH4 emissions are sensitive to changes in climate conditions such as temperature and precipitation shifts. However, biogeochemical processes regulating wetland CH4 emissions (namely microbial production and oxidation of CH4) are not routinely included in fully coupled Earth system models that simulate feedbacks between the physical climate, the carbon cycle, and other biogeochemical cycles. This paper introduces a process-based wetland CH4 model (WETMETH) developed for implementation in Earth system models and currently embedded in an Earth system model of intermediate complexity. Here we: (i) describe the wetland CH4 model; (ii) evaluate the model performance against available datasets and estimates from the literature; (iii) analyze the model sensitivity to perturbations of poorly constrained parameters. Historical simulations show that WETMETH is capable of reproducing mean annual emissions consistent with present-day estimates across spatial scales. For the 2008–2017 decade the model simulates global mean wetland emissions of 158.6 Tg CH4 yr1, of which 33.1 Tg CH4 yr1 are from wetlands north of 45° N. WETMETH is highly sensitive to parameters for the microbial oxidation of CH4, which is the least constrained process in the literature.


2010 ◽  
Vol 34 (3) ◽  
pp. 385-398 ◽  
Author(s):  
Simon Dadson

Earth system science (ESS) is an approach to: ‘obtain a scientific understanding of the entire Earth system on a global scale by describing how its component parts and their interactions have evolved, how they function, and how they may be expected to continue to evolve on all timescales’ (Bretherton, 1998). The aim of this review is to introduce some key examples showing the role of Earth surface processes, the traditional subject of geomorphology, within the interacting Earth system. The paper considers three examples of environmental systems in which geomorphology plays a key role: (1) links between topography, tectonics, and atmospheric circulation; (2) links between geomorphic processes and biogeochemical cycles; and (3) links between biological processes and the Earth’s surface. Key research needs are discussed, including the requirement for better opportunities for interdisciplinary collaboration, clearer mathematical frameworks for Earth system models, and more sophisticated interaction between natural and social scientists.


2021 ◽  
Author(s):  
Ilona M. Otto

<p>The role of humans significantly altering natural systems is undisputed and human influence has been the dominant cause of global warming since the mid-20th century. If components of the Earth System are pushed beyond critical states, further large-scale impacts on human and ecological systems are likely. However, In the Anthropocene, humans are also seen as a force able to facilitate a global sustainability transformation. In other words, the individual becomes a focal point and, applying its inherent human agency, understood as the ability to shape life circumstances, opens up an analytical level incorporating choices and future action plans. The paper systematically reviews approaches that are relevant for operationalizing human agency in global human-environmental interaction models. The key aspects include representing inequalities in the resource and energy that are used to support lifestyles of different social groups, developing a hierarchical networked representation of social structure layers and rules for agent operation at the different levels, and finally building feedback and learning mechanisms that are used by agents to respond to changing environmental conditions and the behaviour of other agents.</p>


2021 ◽  
Author(s):  
Gregory R. Carmichael

<p>Significant societal benefits come from services derived from environmental predication. Meeting the growing societal needs requires improved prediction skill at higher resolution and longer lead time.</p><p><span>To  meet societal needs the Seamless predictions of air quality, weather and climate are needed  to address many of the societal problems related to environmental hazards.</span><strong><span> Improving prediction capabilities via seamless coupling atmospheric composition modelling with weather and climate components via earth systems approaches is a key strategy of GAW to improve prediction capabilities and services. In this paper we describe efforts underway to advance atmospheric composition modelling in earth system models within the context of the recent WMO reforms.</span></strong></p>


2021 ◽  
Vol 14 (10) ◽  
pp. 6215-6240
Author(s):  
Claude-Michel Nzotungicimpaye ◽  
Kirsten Zickfeld ◽  
Andrew H. MacDougall ◽  
Joe R. Melton ◽  
Claire C. Treat ◽  
...  

Abstract. Wetlands are the single largest natural source of methane (CH4), a powerful greenhouse gas affecting the global climate. In turn, wetland CH4 emissions are sensitive to changes in climate conditions such as temperature and precipitation shifts. However, biogeochemical processes regulating wetland CH4 emissions (namely microbial production and oxidation of CH4) are not routinely included in fully coupled Earth system models that simulate feedbacks between the physical climate, the carbon cycle, and other biogeochemical cycles. This paper introduces a process-based wetland CH4 model (WETMETH) developed for implementation in Earth system models and currently embedded in an Earth system model of intermediate complexity. Here, we (i) describe the wetland CH4 model, (ii) evaluate the model performance against available datasets and estimates from the literature, and (iii) analyze the model sensitivity to perturbations of poorly constrained parameters. Historical simulations show that WETMETH is capable of reproducing mean annual emissions consistent with present-day estimates across spatial scales. For the 2008–2017 decade, the model simulates global mean wetland emissions of 158.6 Tg CH4 yr−1, of which 33.1 Tg CH4 yr−1 is from wetlands north of 45∘ N. WETMETH is highly sensitive to parameters for the microbial oxidation of CH4, which is the least constrained process in the literature.


2021 ◽  
Vol 12 (4) ◽  
pp. 1295-1369
Author(s):  
Sebastian Landwehr ◽  
Michele Volpi ◽  
F. Alexander Haumann ◽  
Charlotte M. Robinson ◽  
Iris Thurnherr ◽  
...  

Abstract. The Southern Ocean is a critical component of Earth's climate system, but its remoteness makes it challenging to develop a holistic understanding of its processes from the small scale to the large scale. As a result, our knowledge of this vast region remains largely incomplete. The Antarctic Circumnavigation Expedition (ACE, austral summer 2016/2017) surveyed a large number of variables describing the state of the ocean and the atmosphere, the freshwater cycle, atmospheric chemistry, and ocean biogeochemistry and microbiology. This circumpolar cruise included visits to 12 remote islands, the marginal ice zone, and the Antarctic coast. Here, we use 111 of the observed variables to study the latitudinal gradients, seasonality, shorter-term variations, geographic setting of environmental processes, and interactions between them over the duration of 90 d. To reduce the dimensionality and complexity of the dataset and make the relations between variables interpretable we applied an unsupervised machine learning method, the sparse principal component analysis (sPCA), which describes environmental processes through 14 latent variables. To derive a robust statistical perspective on these processes and to estimate the uncertainty in the sPCA decomposition, we have developed a bootstrap approach. Our results provide a proof of concept that sPCA with uncertainty analysis is able to identify temporal patterns from diurnal to seasonal cycles, as well as geographical gradients and “hotspots” of interaction between environmental compartments. While confirming many well known processes, our analysis provides novel insights into the Southern Ocean water cycle (freshwater fluxes), trace gases (interplay between seasonality, sources, and sinks), and microbial communities (nutrient limitation and island mass effects at the largest scale ever reported). More specifically, we identify the important role of the oceanic circulations, frontal zones, and islands in shaping the nutrient availability that controls biological community composition and productivity; the fact that sea ice controls sea water salinity, dampens the wave field, and is associated with increased phytoplankton growth and net community productivity possibly due to iron fertilisation and reduced light limitation; and the clear regional patterns of aerosol characteristics that have emerged, stressing the role of the sea state, atmospheric chemical processing, and source processes near hotspots for the availability of cloud condensation nuclei and hence cloud formation. A set of key variables and their combinations, such as the difference between the air and sea surface temperature, atmospheric pressure, sea surface height, geostrophic currents, upper-ocean layer light intensity, surface wind speed and relative humidity played an important role in our analysis, highlighting the necessity for Earth system models to represent them adequately. In conclusion, our study highlights the use of sPCA to identify key ocean–atmosphere interactions across physical, chemical, and biological processes and their associated spatio-temporal scales. It thereby fills an important gap between simple correlation analyses and complex Earth system models. The sPCA processing code is available as open-access from the following link: https://renkulab.io/gitlab/ACE-ASAID/spca-decomposition (last access: 29 March 2021). As we show here, it can be used for an exploration of environmental data that is less prone to cognitive biases (and confirmation biases in particular) compared to traditional regression analysis that might be affected by the underlying research question.


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