AB0228 COMPREHENSIVE RHEUMATOID HAND ASSESSMENT THROUGH PATTERN OF DEFORMITIES USING CLUSTER ANALYSIS

2020 ◽  
Vol 79 (Suppl 1) ◽  
pp. 1414-1414
Author(s):  
S. Toyama ◽  
R. Oda ◽  
D. Tokunaga ◽  
S. Tsuchida ◽  
N. Hishikawa ◽  
...  

Background:The treatment of rheumatoid hand, which is characterized by thumb deformity, finger deformities, and ulnar drift (UD), is challenging. Its pathophysiology is complex, and a comprehensive understanding of the optimal intervention for this condition requires high technical skill and extensive clinical experience. Moreover, the natural course of rheumatoid hand itself remains unclear.Objectives:This study was performed to comprehensively evaluate rheumatoid hand through the specific parameters of each deformity.Methods:A rheumatoid hand cohort was established in 2004. In total, 134 hands of 67 patients were registered and underwent clinical evaluations. All hands surgically treated during follow-up were excluded from the study, but the contralateral hands were assessed. Evaluations were repeated in 2009 (100 hands of 52 patients) and in 2015 (63 hands of 37 patients) among all available patients. Therefore, among the data obtained from the 3 study endpoints, 297 hands were available for the cross-sectional analysis and 43 hands were available for the longitudinal analysis.Thumb deformities and finger deformities (swan-neck and boutonnière) were semi-quantitated by the Nalebuff classification score, and UD was quantified using a metacarpophalangeal joint condition scoring method1). A two-step cluster analysis was performed with entered parameters, and the distribution of each parameter was considered to clarify the characteristics of each cluster. The hands with different clusters at each endpoint were recruited for the following longitudinal analysis. The natural course of rheumatoid hand was considered based on the cluster change.Results:Seven clusters were used in this study to emphasize the impact of thumb deformity on function. The characteristics of each cluster were as follows. Cluster 1: mild finger deformities and various severities of UD; Cluster 2: type 1 thumb deformity and various severities of UD; Cluster 3: type 2 thumb deformity and severe UD; Cluster 4: type 3 or 4 thumb deformity, low or moderate level of swan-neck deformity, and various severities of UD; Cluster 5: various types of thumb deformity, severe boutonnière deformity, and various severities of UD; Cluster 6: type 1 thumb deformity, severe swan-neck deformity, and various severities of UD; and Cluster 7: type 6 thumb deformity.The longitudinal analysis showed that Cluster 1 mainly changed to Cluster 2 or 4, indicating progression of thumb deformity. Cluster 2 changed to Cluster 3, indicating that thumb type 1 progressed to type 2 (Figure 1). When the affected period was shorter than 10 years, the incidence of severe hand deformity (including two or more affected joint areas and low hand function) was <10%. In contrast, when the affected period was longer than 10 years, the incidence of severe hand deformity was >30% (Figure 2).Figure 1.Figure 2.Conclusion:This study suggests the presence of seven patterns of deformity enabling a comprehensive understanding of rheumatoid hand. Furthermore, the results of the longitudinal analysis suggest a natural course of rheumatoid hand progression. Therefore, from the distribution of parameters of each deformity and its severity, rheumatologists can easily classify rheumatoid hand and determine its pathophysiology to choose the most effective intervention.References:[1]Toyama S, Oda R, Tokunaga D et al. A new assessment tool for ulnar drift in patients with rheumatoid arthritis using pathophysiological parameters of the metacarpophalangeal joint. Modern rheumatology 2019, 29: 113-8.Acknowledgments:This work was supported by JSPS KAKENHI Grant Numbers JP19K19914.Disclosure of Interests:None declared

2020 ◽  
Author(s):  
Shogo Toyama ◽  
Ryo Oda ◽  
Daisaku Tokunaga ◽  
Shinji Tsuchida ◽  
Rie Kushida ◽  
...  

Abstract Background Although drug therapy in rheumatoid arthritis has recently improved, treating established rheumatoid hand consisting of three major deformities—thumb deformity, finger deformities, and ulnar drift—remains a challenge. Underlying complex pathophysiology makes it difficult to comprehensively understand these deformities, and comprehensive assessment methods require accumulated skill and long learning curves. We aimed to establish an easier composite method of understanding the pathophysiology using data from our cohort and cluster analysis. Methods We established a rheumatoid hand cohort in 2004, and clinically evaluated 134 hands (67 patients). We repeated the evaluations in 2009 and 2015, which provided data for 297 hands and 43 hands for cross-sectional and longitudinal analyses, respectively. Thumb deformities, finger deformities (swan-neck and boutonnière deformity), and ulnar drift were semi-quantified and entered as parameters into a two-step cluster (cross-sectional) analysis. Parameter distributions were considered to clarify each cluster’s characteristics. Next, hands with cluster change over the study period were reviewed to clarify deformity progression (longitudinal analysis). We also performed a stratified analysis between the clusters and the affected period to clarify whether long affected period plays an important role in deformity progression. Results We identified seven clusters: cluster 1: mild finger deformities; cluster 2: type 1 thumb deformity; cluster 3: type 2 thumb deformity and severe ulnar drift; cluster 4: type 3 or 4 thumb deformity and low or moderate swan-neck deformity; cluster 5: various thumb deformities and severe boutonnière deformity; cluster 6: type 1 thumb deformity and severe swan-neck deformity; and cluster 7: type 6 thumb deformity. The ulnar drift parameters were equally distributed among the clusters except for cluster 3. Larger cluster numbers generally indicated lower function. At the study endpoint, cluster 1 had changed mainly to cluster 2 or 4, cluster 2 changed to cluster 3, and cluster 7 was considered the final morphology with the lowest hand function. Patients affected for > 30 years had increased risk of rapid disability progression. Conclusions Our comprehensive assessment indicated seven deformity patterns and a progressive course in rheumatoid hand. Using patterns may provide rheumatologists with easier information for practical interventions and to determine functional prognosis.


2020 ◽  
Vol 11 ◽  
Author(s):  
Chun-Ting Lee ◽  
Keng-Shiang Huang ◽  
Jei-Fu Shaw ◽  
Jung-Ren Chen ◽  
Wen-Shuo Kuo ◽  
...  

Cordyceps militaris (C. militaris) is a fungus with a long history of widespread use in folk medicine, and its biological and medicinal functions are well studied. A crucial pharmacological effect of C. militaris is immunomodulation. In this review, we catalog the immunomodulatory effects of different extracts of C. militaris, namely total extracts, polysaccharides and cordycepin. Total extracts obtained using water or 50% ethyl alcohol and polysaccharides from C. militaris were discovered to tend to promote type 1 immunity, whereas total extracts obtained using 70–80% ethyl alcohol and cordycepin from C. militaris were more likely to promote type 2 immunity. This article is the first to classify the immunomodulatory effects of different extracts of C. militaris. In addition, we discovered a relationship between different segments or extracts and differing types of immunity. This review can provide the readers a comprehensive understanding on the immunomodulatory effects of the precious folk medicine and guidance on its use for both health people and those with an immunodeficiency.


2015 ◽  
Vol 70 (7-8) ◽  
pp. 191-195 ◽  
Author(s):  
Jose Isagani B. Janairo ◽  
Frumencio Co ◽  
Jose Santos Carandang ◽  
Divina M. Amalin

Abstract A reliable and statistically valid classification of biomineralization peptides is herein presented. 27 biomineralization peptides (BMPep) were randomly selected as representative samples to establish the classification system using k-means method. These biomineralization peptides were either discovered through isolation from various organisms or via phage display. Our findings show that there are two types of biomineralization peptides based on their length, molecular weight, heterogeneity, and aliphatic residues. Type-1 BMPeps are more commonly found and exhibit higher values for these significant clustering variables. In contrast are the type-2 BMPeps, which have lower values for these parameters and are less common. Through our clustering analysis, a more efficient and systematic approach in BMPep selection is possible since previous methods of BMPep classification are unreliable.


2022 ◽  
Vol 58 (1) ◽  
pp. 125-129
Author(s):  
K. J. Raghavendra ◽  
L. R. Meena ◽  
A. L. Meena ◽  
Debashis Dutta ◽  
Nirmal k ◽  
...  

The farming systems having diverse characteristics need to be understand for tailoredtechnological interventions. Farm typology designates the heterogeneous farmers’characteristics in to homogenous groups to understand the factual situation in the region.The multivariate analysis viz. PCA and Cluster analysis performed to minimize data andgroup them into homogenous characteristics by various farm variables. A cross sectionsurvey of 120 farmers in WPZ of Uttar Pradesh was carried out and identified 9 significantvariables and generated 4 PCs from PCA. Hierarchical clustering of PCs leads to groupingfarms into homogenous class. The predominant farm types based are type-1 (22.5%)livestock based intensive farms, type-2 (23.3%) are resource endowed large farms, type-3(10.8%) are crop based marginal farms and type-4 (43.3%) are small farmers with highprofit margin. Large farms are integrated with crop and animal components earning higherincome. The results show that the diversified farms with both livestock and crop sectorsare reaping better income and technology adoption capacities.


2021 ◽  
Vol 12 ◽  
Author(s):  
Denis A. Kleymenov ◽  
Evgeniia N. Bykonia ◽  
Liubov I. Popova ◽  
Elena P. Mazunina ◽  
Vladimir A. Gushchin ◽  
...  

An excessive inflammatory response to SARS-CoV-2 is thought to be a major cause of disease severity and mortality in patients with COVID-19. Longitudinal analysis of cytokine release can expand our understanding of the initial stages of disease development and help to identify early markers serving as predictors of disease severity. In this study, we performed a comprehensive analysis of 46 cytokines (including chemokines and growth factors) in the peripheral blood of a large cohort of COVID-19 patients (n=444). The patients were classified into five severity groups. Longitudinal analysis of all patients revealed two groups of cytokines, characterizing the “early” and “late” stages of the disease course and the switch between type 1 and type 2 immunity. We found significantly increased levels of cytokines associated with different severities of COVID-19, and levels of some cytokines were significantly higher during the first three days from symptom onset (DfSO) in patients who eventually required intensive care unit (ICU) therapy. Additionally, we identified nine cytokines, TNF-α, IL-10, MIG, IL-6, IP-10, M-CSF, G-CSF, GM-CSF, and IFN-α2, that can be used as good predictors of ICU requirement at 4-6 DfSO.


2017 ◽  
Vol 91 (15) ◽  
Author(s):  
Samantha Correia ◽  
Anne Palser ◽  
Claudio Elgueta Karstegl ◽  
Jaap M. Middeldorp ◽  
Octavia Ramayanti ◽  
...  

ABSTRACT Viral gene sequences from an enlarged set of about 200 Epstein-Barr virus (EBV) strains, including many primary isolates, have been used to investigate variation in key viral genetic regions, particularly LMP1, Zp, gp350, EBNA1, and the BART microRNA (miRNA) cluster 2. Determination of type 1 and type 2 EBV in saliva samples from people from a wide range of geographic and ethnic backgrounds demonstrates a small percentage of healthy white Caucasian British people carrying predominantly type 2 EBV. Linkage of Zp and gp350 variants to type 2 EBV is likely to be due to their genes being adjacent to the EBNA3 locus, which is one of the major determinants of the type 1/type 2 distinction. A novel classification of EBNA1 DNA binding domains, named QCIGP, results from phylogeny analysis of their protein sequences but is not linked to the type 1/type 2 classification. The BART cluster 2 miRNA region is classified into three major variants through single-nucleotide polymorphisms (SNPs) in the primary miRNA outside the mature miRNA sequences. These SNPs can result in altered levels of expression of some miRNAs from the BART variant frequently present in Chinese and Indonesian nasopharyngeal carcinoma (NPC) samples. The EBV genetic variants identified here provide a basis for future, more directed analysis of association of specific EBV variations with EBV biology and EBV-associated diseases. IMPORTANCE Incidence of diseases associated with EBV varies greatly in different parts of the world. Thus, relationships between EBV genome sequence variation and health, disease, geography, and ethnicity of the host may be important for understanding the role of EBV in diseases and for development of an effective EBV vaccine. This paper provides the most comprehensive analysis so far of variation in specific EBV genes relevant to these diseases and proposed EBV vaccines. By focusing on variation in LMP1, Zp, gp350, EBNA1, and the BART miRNA cluster 2, new relationships with the known type 1/type 2 strains are demonstrated, and a novel classification of EBNA1 and the BART miRNAs is proposed.


1996 ◽  
Vol 121 (2) ◽  
pp. 204-209 ◽  
Author(s):  
Creighton Gupton ◽  
John Clark ◽  
David Creech ◽  
Arlie Powell ◽  
Susan Rooks

To determine if any of the available techniques for estimating stability in different environments are useful in blueberry (Vaccinium ashei Reade and V. corymbosum L.), 14 clones were evaluated in nine environments for ripening date and yield. Type 1 and 2 stability statistics, plots for each genotype mean versus its coefficient of variation (cv) across environments (genotype grouping), environmental index regression, and cluster analyses were compared. The highest yielding rabbiteye and southern highbush clones across locations were not deemed stable by Type 1 and Type 2 stability statistics, genotype grouping, or environmental regression technique. No evidence of curvilinear response was found. The nonparametric cluster analysis with known cultivars included appears to be most useful compared to other methods of estimating stability used in this study.


2008 ◽  
Vol 38 (15) ◽  
pp. 18
Author(s):  
SHERRY BOSCHERT
Keyword(s):  

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