FROM EMPIRICAL DATA TO INTER-INDIVIDUAL INTERACTIONS: UNVEILING THE RULES OF COLLECTIVE ANIMAL BEHAVIOR

2010 ◽  
Vol 20 (supp01) ◽  
pp. 1491-1510 ◽  
Author(s):  
ANDREA CAVAGNA ◽  
ALESSIO CIMARELLI ◽  
IRENE GIARDINA ◽  
GIORGIO PARISI ◽  
RAFFAELE SANTAGATI ◽  
...  

Animal groups represent magnificent archetypes of self-organized collective behavior. As such, they have attracted enormous interdisciplinary interest in the last years. From a mechanistic point of view, animal aggregations remind physical systems of particles or spins, where the individual constituents interact locally, giving rise to ordering at the global scale. This analogy has fostered important research, where numerical and theoretical approaches from physics have been applied to models of self-organized motion. In this paper, we discuss how the physics methodology may provide precious conceptual and technical instruments in empirical studies of collective animal behavior. We focus on three-dimensional groups, for which empirical data have been extremely scarce until recently, and describe novel experimental protocols that allow reconstructing aggregations of thousands of individuals. We show how an appropriate statistical analysis of these large-scale data allows inferring important information on the interactions between individuals in a group, a key issue in behavioral studies and a basic ingredient of theoretical models. To this aim, we revisit the approach we recently used on starling flocks, and apply it to a much larger data set, never analyzed before. The results confirm our previous findings and indicate that interactions between birds have a topological rather than metric nature, each individual interacting with a fixed number of neighbors irrespective of their distances.

2008 ◽  
Vol 3 (2) ◽  
pp. 141-163 ◽  
Author(s):  
KARSTEN VRANGBÆK*

AbstractThis article investigates the current use of Public–Private Partnerships (PPP) in the Danish health sector based on an initial discussion of theoretical approaches that analyze PPP. The empirical analysis concludes that PPP has been used very sparsely in the Danish health sector. There are few examples of large-scale partnership projects with joint investment and risk taking, but a number of smaller partnerships such as jointly owned companies at the regional level. When defining PPP more broadly, we can identify a long tradition for various types of collaboration between public and private actors in health care in Denmark. An analysis of the regulatory environment is offered as an explanation for the limited use of PPPs in Denmark. Major political and institutional actors at the central level differ in their enthusiasm for the PPP concept, and the regulatory framework is somewhat uncertain. A number of general issues and concerns related to PPPs are also discussed. It is suggested that a risk-based framework can be useful for mapping the potential and challenges for both private and public partners. Such a framework can be used to feed into game theoretical models of pros and cons for PPP projects. In general terms, it is concluded that more empirical research is needed for the assessment of the various risk factors involved in using PPPs in health care. Most PPPs are still very young, and the evidence on performance and broader governance issues is only just emerging. Ideally, such assessments should include comparisons with a purely public alternative.


2014 ◽  
Vol 11 (96) ◽  
pp. 20140089 ◽  
Author(s):  
Quan-Xing Liu ◽  
Ellen J. Weerman ◽  
Rohit Gupta ◽  
Peter M. J. Herman ◽  
Han Olff ◽  
...  

Theoretical models highlight that spatially self-organized patterns can have important emergent effects on the functioning of ecosystems, for instance by increasing productivity and affecting the vulnerability to catastrophic shifts. However, most theoretical studies presume idealized homogeneous conditions, which are rarely met in real ecosystems. Using self-organized mussel beds as a case study, we reveal that spatial heterogeneity, resulting from the large-scale effects of mussel beds on their environment, significantly alters the emergent properties predicted by idealized self-organization models that assume homogeneous conditions. The proposed model explicitly considers that the suspended algae, the prime food for the mussels, are supplied by water flow from the seaward boundary of the bed, which causes in combination with consumption a gradual depletion of algae over the simulated domain. Predictions of the model are consistent with properties of natural mussel patterns observed in the field, featuring a decline in mussel biomass and a change in patterning. Model analyses reveal a fundamental change in ecosystem functioning when this self-induced algal depletion gradient is included in the model. First, no enhancement of secondary productivity of the mussels comparing with non-patterns states is predicted, irrespective of parameter setting; the equilibrium amount of mussels is entirely set by the input of algae. Second, alternate stable states, potentially present in the original (no algal gradient) model, are absent when gradual depletion of algae in the overflowing water layer is allowed. Our findings stress the importance of including sufficiently realistic environmental conditions when assessing the emergent properties of self-organized ecosystems.


1999 ◽  
Vol 26 (5) ◽  
pp. 597-605 ◽  
Author(s):  
Hashem R Al-Masaeid

Empirical and theoretical approaches for assessing the capacity and performance of roundabout entries have provided inconsistent results. It was believed that an efficient modeling of gap-acceptance behavior of drivers entering into a roundabout would provide more insight for assessing roundabout operation. Accordingly, this study used logit modeling to predict the probability that a randomly selected driver will accept a given gap in the circulating traffic stream based upon roundabout and gap characteristics. Also, the study has developed move-up time models using both the roundabout geometry and circulating traffic characteristics. The developed gap-acceptance and move-up time models have implications in roundabout capacity estimation analysis. Finally, the results of the developed models are incorporated into the Australian and German gap theoretical models to judge the feasibility of using these theoretical models for Jordan conditions. Compared with an empirical data set, the Australian theoretical model with a minimum headway of 0.5 s provides reasonable results.Key words: capacity analysis, probabilistic approach, roundabouts.


2021 ◽  
Author(s):  
Peng Wang ◽  
Yunyan Hu ◽  
Shaochen Bai ◽  
Shiyi Zou

BACKGROUND Ontology matching seeks to find semantic correspondences between ontologies. With an increasing number of biomedical ontologies being developed independently, matching these ontologies to solve the interoperability problem has become a critical task in biomedical applications. However, some challenges remain. First, extracting and constructing matching clues from biomedical ontologies is a nontrivial problem. Second, it is unknown whether there are dominant matchers while matching biomedical ontologies. Finally, ontology matching also suffers from computational complexity owing to the large-scale sizes of biomedical ontologies. OBJECTIVE To investigate the effectiveness of matching clues and composite match approaches, this paper presents a spectrum of matchers with different combination strategies and empirically studies their influence on matching biomedical ontologies. Besides, extended reduction anchors are introduced to effectively decrease the time complexity while matching large biomedical ontologies. METHODS In this paper, atomic and composite matching clues are first constructed in 4 dimensions: terminology, structure, external knowledge, and representation learning. Then, a spectrum of matchers based on a flexible combination of atomic clues are designed and utilized to comprehensively study the effectiveness. Besides, we carry out a systematic comparative evaluation of different combinations of matchers. Finally, extended reduction anchor is proposed to significantly alleviate the time complexity for matching large-scale biomedical ontologies. RESULTS Experimental results show that considering distinguishable matching clues in biomedical ontologies leads to a substantial improvement in all available information. Besides, incorporating different types of matchers with reliability results in a marked improvement, which is comparative to the state-of-the-art methods. The dominant matchers achieve F1 measures of 0.9271, 0.8218, and 0.5 on Anatomy, FMA-NCI (Foundation Model of Anatomy-National Cancer Institute), and FMA-SNOMED data sets, respectively. Extended reduction anchor is able to solve the scalability problem of matching large biomedical ontologies. It achieves a significant reduction in time complexity with little loss of F1 measure at the same time, with a 0.21% decrease on the Anatomy data set and 0.84% decrease on the FMA-NCI data set, but with a 2.65% increase on the FMA-SNOMED data set. CONCLUSIONS This paper systematically analyzes and compares the effectiveness of different matching clues, matchers, and combination strategies. Multiple empirical studies demonstrate that distinguishing clues have significant implications for matching biomedical ontologies. In contrast to the matchers with single clue, those combining multiple clues exhibit more stable and accurate performance. In addition, our results provide evidence that the approach based on extended reduction anchors performs well for large ontology matching tasks, demonstrating an effective solution for the problem.


2016 ◽  
Vol 27 (01) ◽  
pp. 1650033 ◽  
Author(s):  
Christian Geier ◽  
Klaus Lehnertz

Nodes in large-scale epileptic networks that are crucial for seizure facilitation and termination can be regarded as potential targets for individualized focal therapies. Graph-theoretical approaches based on centrality concepts can help to identify such important nodes, however, they may be influenced by the way networks are derived from empirical data. Here we investigate evolving functional epileptic brain networks during 82 focal seizures with different anatomical onset locations that we derive from multichannel intracranial electroencephalographic recordings from 51 patients. We demonstrate how the various methodological steps (from the recording montage via node and link inference to the assessment of node centralities) affect importance estimation and discuss their impact on the interpretability of findings in the context of pathophysiological aspects of seizure dynamics.


10.2196/28212 ◽  
2021 ◽  
Vol 9 (8) ◽  
pp. e28212
Author(s):  
Peng Wang ◽  
Yunyan Hu ◽  
Shaochen Bai ◽  
Shiyi Zou

Background Ontology matching seeks to find semantic correspondences between ontologies. With an increasing number of biomedical ontologies being developed independently, matching these ontologies to solve the interoperability problem has become a critical task in biomedical applications. However, some challenges remain. First, extracting and constructing matching clues from biomedical ontologies is a nontrivial problem. Second, it is unknown whether there are dominant matchers while matching biomedical ontologies. Finally, ontology matching also suffers from computational complexity owing to the large-scale sizes of biomedical ontologies. Objective To investigate the effectiveness of matching clues and composite match approaches, this paper presents a spectrum of matchers with different combination strategies and empirically studies their influence on matching biomedical ontologies. Besides, extended reduction anchors are introduced to effectively decrease the time complexity while matching large biomedical ontologies. Methods In this paper, atomic and composite matching clues are first constructed in 4 dimensions: terminology, structure, external knowledge, and representation learning. Then, a spectrum of matchers based on a flexible combination of atomic clues are designed and utilized to comprehensively study the effectiveness. Besides, we carry out a systematic comparative evaluation of different combinations of matchers. Finally, extended reduction anchor is proposed to significantly alleviate the time complexity for matching large-scale biomedical ontologies. Results Experimental results show that considering distinguishable matching clues in biomedical ontologies leads to a substantial improvement in all available information. Besides, incorporating different types of matchers with reliability results in a marked improvement, which is comparative to the state-of-the-art methods. The dominant matchers achieve F1 measures of 0.9271, 0.8218, and 0.5 on Anatomy, FMA-NCI (Foundation Model of Anatomy-National Cancer Institute), and FMA-SNOMED data sets, respectively. Extended reduction anchor is able to solve the scalability problem of matching large biomedical ontologies. It achieves a significant reduction in time complexity with little loss of F1 measure at the same time, with a 0.21% decrease on the Anatomy data set and 0.84% decrease on the FMA-NCI data set, but with a 2.65% increase on the FMA-SNOMED data set. Conclusions This paper systematically analyzes and compares the effectiveness of different matching clues, matchers, and combination strategies. Multiple empirical studies demonstrate that distinguishing clues have significant implications for matching biomedical ontologies. In contrast to the matchers with single clue, those combining multiple clues exhibit more stable and accurate performance. In addition, our results provide evidence that the approach based on extended reduction anchors performs well for large ontology matching tasks, demonstrating an effective solution for the problem.


2017 ◽  
Vol 114 (30) ◽  
pp. 8035-8040 ◽  
Author(s):  
Hélène de Paoli ◽  
Tjisse van der Heide ◽  
Aniek van den Berg ◽  
Brian R. Silliman ◽  
Peter M. J. Herman ◽  
...  

Self-organized spatial patterns occur in many terrestrial, aquatic, and marine ecosystems. Theoretical models and observational studies suggest self-organization, the formation of patterns due to ecological interactions, is critical for enhanced ecosystem resilience. However, experimental tests of this cross-ecosystem theory are lacking. In this study, we experimentally test the hypothesis that self-organized pattern formation improves the persistence of mussel beds (Mytilus edulis) on intertidal flats. In natural beds, mussels generate self-organized patterns at two different spatial scales: regularly spaced clusters of mussels at centimeter scale driven by behavioral aggregation and large-scale, regularly spaced bands at meter scale driven by ecological feedback mechanisms. To test for the relative importance of these two spatial scales of self-organization on mussel bed persistence, we conducted field manipulations in which we factorially constructed small-scale and/or large-scale patterns. Our results revealed that both forms of self-organization enhanced the persistence of the constructed mussel beds in comparison to nonorganized beds. Small-scale, behaviorally driven cluster patterns were found to be crucial for persistence, and thus resistance to wave disturbance, whereas large-scale, self-organized patterns facilitated reformation of small-scale patterns if mussels were dislodged. This study provides experimental evidence that self-organization can be paramount to enhancing ecosystem persistence. We conclude that ecosystems with self-organized spatial patterns are likely to benefit greatly from conservation and restoration actions that use the emergent effects of self-organization to increase ecosystem resistance to disturbance.


2020 ◽  
Author(s):  
Vincent Deluca ◽  
Katrien Segaert ◽  
Ali Mazaheri ◽  
Andrea Krott

A growing body of research shows that the brain adapts functionally and structurally to specific bilingual experiences. These brain adaptations seem related to modulations in cognitive processes (specifically the executive functions). However, the trajectory of these adaptations is varied and seems at least partially dependent on different aspects of language exposure and use. Here we provide a review of the existing theoretical models covering bilingualism-induced neuroplasticity. Moreover, we propose a unifying framework (Unifying the Bilingual Experience Trajectories, UBET) to more comprehensively map the relationship between the various neurocognitive adaptations and different aspects of bilingual experience trajectories, focusing on intensity and diversity of language use, language switching, relative proficiency, and duration of bilingual experience. Crucially, we also outline predictions regarding both relationships between different bilingual experience factors and relationships between the measurable neurocognitive adaptations. Our framework offers a theoretical backdrop and clear testable predictions for future large-scale empirical studies on individual differences in bilingual trajectories and their effects on neurocognitive adaptations.


2020 ◽  
Author(s):  
Yang Xiang ◽  
Thomas Graeber ◽  
Benjamin Enke ◽  
Samuel J. Gershman

Despite a surge of interest in theoretical models of Bayesian cognition, direct empirical evidence for their validity remains limited. This paper studies Bayesian signatures in perceptual judgment, focusing on the central tendency effect: perceptual judgments are consistently biased towards the center of the stimulus distribution. Based on a formal Bayesian framework, we show that lower subjective confidence as a measure of posterior uncertainty about a judgment predicts (i) a lower sensitivity of magnitude estimates to objective stimuli; (ii) a higher sensitivity to the mean of the stimulus distribution; (iii) a stronger central tendency effect at higher stimulus magnitudes; and (iv) higher response variability. To test these predictions, we collect a tailored large-scale experimental data set and additionally re-analyze perceptual judgment data from several previous experiments. Across data sets, subjective confidence is strongly predictive of the central tendency effect and response variability, both correlationally and when we exogenously manipulate the magnitude of sensory noise. Our results lend support to Bayesian explanations of both confidence and the central tendency effect.


Author(s):  
Debi A. LaPlante ◽  
Heather M. Gray ◽  
Pat M. Williams ◽  
Sarah E. Nelson

Abstract. Aims: To discuss and review the latest research related to gambling expansion. Method: We completed a literature review and empirical comparison of peer reviewed findings related to gambling expansion and subsequent gambling-related changes among the population. Results: Although gambling expansion is associated with changes in gambling and gambling-related problems, empirical studies suggest that these effects are mixed and the available literature is limited. For example, the peer review literature suggests that most post-expansion gambling outcomes (i. e., 22 of 34 possible expansion outcomes; 64.7 %) indicate no observable change or a decrease in gambling outcomes, and a minority (i. e., 12 of 34 possible expansion outcomes; 35.3 %) indicate an increase in gambling outcomes. Conclusions: Empirical data related to gambling expansion suggests that its effects are more complex than frequently considered; however, evidence-based intervention might help prepare jurisdictions to deal with potential consequences. Jurisdictions can develop and evaluate responsible gambling programs to try to mitigate the impacts of expanded gambling.


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