scholarly journals IMA Genome-F 11

IMA Fungus ◽  
2019 ◽  
Vol 10 (1) ◽  
Author(s):  
Brenda D. Wingfield ◽  
Arista Fourie ◽  
Melissa C. Simpson ◽  
Vuyiswa S. Bushula-Njah ◽  
Janneke Aylward ◽  
...  

Abstract Draft genomes of the fungal species Fusarium xylarioides, Teratosphaeria gauchensis and T. zuluensis are presented. In addition an annotation of the genome of Ceratocystis fimbriata is presented. Overall these genomes provide a valuable resource for understanding the molecular processes underlying pathogenicity and potential management strategies of these economically important fungi.

IMA Fungus ◽  
2020 ◽  
Vol 11 (1) ◽  
Author(s):  
P. Markus Wilken ◽  
Janneke Aylward ◽  
Ramesh Chand ◽  
Felix Grewe ◽  
Frances A. Lane ◽  
...  

ABSTRACT Draft genomes of the fungal species Ambrosiella cleistominuta, Cercospora brassicicola, C. citrullina, Physcia stellaris, and Teratosphaeria pseudoeucalypti are presented. Physcia stellaris is an important lichen forming fungus and Ambrosiella cleistominuta is an ambrosia beetle symbiont. Cercospora brassicicola and C. citrullina are agriculturally relevant plant pathogens that cause leaf-spots in brassicaceous vegetables and cucurbits respectively. Teratosphaeria pseudoeucalypti causes severe leaf blight and defoliation of Eucalyptus trees. These genomes provide a valuable resource for understanding the molecular processes in these economically important fungi.


2021 ◽  
Vol 5 (2) ◽  
pp. 60-70
Author(s):  
Alejandro Kepler Llanos Melo ◽  
Walter Eduardo Apaza-Tapia

Stem-end rot (SER) of avocado is caused by several fungal species, and it is presented worldwide. This plant disease currently affects several avocado producer regions in Peru, causing fruit rot, impacting the industry negatively. Research about SER distribution in the canopy of avocado trees is limited. Thus, the present study aimed to compare which areas in the canopy are prone to have more SER in ‘Hass’ avocado harvested fruit in two different coastal areas in Peru. The experiment was conducted in the northern (Barranca) and southern (Cañete) of Lima. ‘Hass’Avocado fruits from both producer areas were collected to identify the causal agent; Lasiodiplodia theobromae was isolated from infected fruits. Identification was conducted based on morphological features and a partial DNA sequence of the translation elongation factor 1-α gene (tef1-α). The results showed that fruits inside the tree canopy were prone to have a higher disease incidence than the fruits located in the external site (P<0.001). Besides, internal-site fruits displayed a higher percentage of infected fruit for each grade disease (P<0.001) than external-site fruits, except for grade 0 (fruits without symptoms) and grade 1. Finally, the results suggested that the altitude where the fruit is positioned on the canopy could influence the incidence of SER, where fruits located in the high part revealed less incidence than the low section. The results are valuable for enhancing management strategies and avoiding postharvest loss of avocado fruits in our region.


2017 ◽  
Vol 29 (1) ◽  
pp. 181 ◽  
Author(s):  
Zohaib Ul. Hassan ◽  
Nadeem Nazami

This review addresses one of the most emerging threats to Mango (Mangifera indica L.) production known as the Mango Sudden Decline (MSD), also referred as Mango Quick Wilt. Manifestation records of MSD/ Mango Quick Wilt have been reported from major Mango growing countries like Brazil, Oman and Pakistan where the disease is presently known to occur in mango. Fungus Ceratocystis fimbriata from family filamentous Ascomycetes vectored by Hypocryphalus mangiferae (Stebbing) bark beetle is the main cause of the disease (MSD) in Pakistan and other Mango growing regions as well. Different type of symptoms for MSD have been reported like gummosis, canker formation, bark splitting, drying of twigs, branches and curling of leaves. Hemicriconemoides mangiferae nematode has also been reported as a vector of this MSD causing fungus. This species of Ceratocystis that roots the disease on mango was first reported in Brazil after that in Oman and Pakistan. Currently, different mating types of the causative agent have also been reported making this problem a significant one. Applications of different doses of nutrients have been reported in reduction of MSD. But there is need to apply knowledge and management strategies with particular emphasis to overcome MSD causes and vectors.


Forests ◽  
2019 ◽  
Vol 10 (6) ◽  
pp. 488 ◽  
Author(s):  
Claudia Pinna ◽  
Benedetto T. Linaldeddu ◽  
Vitale Deiana ◽  
Lucia Maddau ◽  
Lucio Montecchio ◽  
...  

The black-banded oak borer, Coraebus florentinus, is an emerging pest of oak trees in the western Mediterranean region. Larvae of the insect are xylophagous and progressively excavate an annular gallery that interrupts sap flow, resulting in the death of the attacked branches. Until now, limited information has been available regarding the ecological interactions between C. florentinus and the main plant pathogenic fungi involved in the etiology of oak decline. Knowledge of these interactions is important in understanding their impact in natural ecosystems and developing appropriate management strategies. Therefore, in this study, we characterized the fungal communities occurring in the exoskeleton of adults and larvae of C. florentinus and associated with the necrotic wood tissues surrounding the branch galleries of declining oak trees. A total of 29 fungal species were identified based on DNA sequence data and morphological features, of which 14 were from symptomatic woody tissues, six from insect exoskeleton, and nine from both insects and symptomatic wood tissues. The most frequent fungal species, Cryphonectria naterciae (15.9% of isolates), Dothiorella iberica (11.3%), and Diplodia corticola (9.9%), were isolated from both insect and gallery systems. All three species are well-known oak pathogens and are reported here, for the first time, to be associated with C. florentinus. At the same time, 89.6% of the fungal taxa were isolated from one or two sites, highlighting the site-dependence of fungal community assemblages.


Plant Disease ◽  
2020 ◽  
Vol 104 (3) ◽  
pp. 930-937 ◽  
Author(s):  
M. Stahr ◽  
L. M. Quesada-Ocampo

In 2014, Ceratocystis fimbriata, causal agent of black rot in sweetpotato, reemerged and inflicted large financial losses on growers in the United States. Black rot continues to damage sweetpotatoes and has become a priority to the industry since then. In contrast, little is known about the biology of C. fimbriata and the epidemiology of sweetpotato black rot. In this study, effects of environmental factors such as inoculum density, RH, and temperature on sweetpotato black rot were determined. Cured sweetpotatoes were wounded with a toothpick to simulate puncture wounds, inoculated with different spore suspensions (inoculum density) (104, 105, or 106 spores/ml), and incubated under different RH (85.53, 94.09, or 97.01%) and temperature (13, 18, 23, 29, or 35°C) for 21 days. In a separate experiment, five root wounding types (cuts, punctures, abrasions, end breaks, and macerating bruises) were compared. All wounded roots were subsequently soaked in a 103 spores/ml suspension and incubated at 100% RH and 23°C for 21 days. This study found 29 and 23°C to be the optimal temperature for black rot disease development and sporulation, respectively. No pathogen growth was observed at 13 and 35°C. Increased inoculum density significantly (P < 0.0001) increased disease incidence, but increasing RH had an effect only on sporulation area. All wound types resulted in increased disease incidence and sporulation as early as 7 days postinoculation. Our results highlight the importance of characterizing factors that affect disease development for achieving successful disease management strategies. Findings from this study will be used to improve disease management for sweetpotato black rot by suggesting tighter regulation of curing and storage conditions and better postharvest handling of sweetpotato roots to avoid unnecessary wounding.


Author(s):  
Irene Martín ◽  
Mercedes Ramos ◽  
Luis Alberto Rivas Herrero

Corporate entrepreneurship or intrapreneurship is increasingly seen as a way of generating competitive advantages in companies and institutions. The current climate calls for organisations to innovate their management strategies to bring them in line with these new requirements. One such alternative is to capitalise on the commitment, capacity, ingenuity and creativity of their human talent. Companies need to be more streamlined. They need entrepreneurial employees, capable of working internally as if they were a start-up. That intellectual capital (IC) generated by the corporate entrepreneurs is the most valuable resource and most important dynamic capability that knowledge-intensive institutions (learning organizations) have in order to achieve future competitive positioning. The legal protection of IC is deemed essential to protect the base of the core competences. This article describes and justifies the need to foster and develop corporate entrepreneurship and the internal conditions required to do so.


Plant Disease ◽  
2020 ◽  
Vol 104 (3) ◽  
pp. 868-874
Author(s):  
J. X. Liu ◽  
Y. N. Cai ◽  
W. Y. Jiang ◽  
Y. G. Li ◽  
Q. F. Zhang ◽  
...  

Rice seedling blight, which is caused by diverse pathogenic microorganisms, occurs worldwide and is the most important seedling disease affecting rice production in Northeast China. To further characterize the population structure and genetic diversity of the fungi responsible for rice seedling blight in Northeast China, 225 fungal strains were isolated from diseased rice seedlings collected from various rice-producing areas. The isolated strains included Fusarium oxysporum (48.0%), F. verticillioides (11.6%), F. tricinctum (8.0%), F. redolens (6.7%), F. equiseti (6.2%), F. solani (6.2%), Rhizoctonia solani (6.7%), Alternaria alternata (4.0%), and Curvularia coatesiae (2.7%). F. oxysporum was the dominant fungal species causing rice seedling blight, with most isolates exhibiting moderate pathogenicity. Moreover, to our knowledge, this is the first study to identify A. alternata and C. coatesiae as causal agents of rice seedling blight in Northeast China. None of the F. oxysporum isolates were sensitive to 10 μg/ml of carbendazim, implying that carbendazim is ineffective for controlling rice seedling blight in Northeast China. The F. oxysporum isolates were divided into nine groups based on a simple sequence repeat analysis involving 14 primer pairs. In addition, an analysis of molecular variance revealed a significant correlation between the F. oxysporum population and geographical location, which had a significant effect on the differentiation of the dominant isolate population. The results of this study provide insights into the genetic diversity of F. oxysporum strains causing rice seedling blight and may be useful for selecting isolates to screen for disease-resistant rice varieties, evaluating fungicide efficacy, and developing effective disease management strategies.


Biology ◽  
2021 ◽  
Vol 10 (10) ◽  
pp. 1025
Author(s):  
Yasser M. Shabana ◽  
Younes M. Rashad ◽  
Khalid M. Ghoneem ◽  
Nehal S. Arafat ◽  
Dalia G. Aseel ◽  
...  

Surveillance investigations for pathogenic and toxigenic fungi are important to refine our understanding of their epidemiology and help in predicting their outbreaks. During 2019, 198 samples of wheat grains were collected from 25 wheat-growing governorates in Egypt to detect and identify seed-borne mycoflora in vitro. Forty-four fungal species belonging to 20 genera were identified. Molecular data for these fungi were analyzed to construct a phylogenetic tree. Occurrence and biodiversity indicators were calculated. Two prevalent pathogens (average incidence > 40%) were Alternaria alternata and Cladosporium spp. Ustilago tritici was present in only seven of the 25 governorates, and less abundant than Tilletia tritici, the causal agent of stinking smut. Sinai governorate recorded the greatest species diversity, while the greatest species richness was in Qena and Sohag governorates. Canonical correspondence analysis of data for 20 fungal genera with temperature, relative humidity, precipitation, wind speed or solar radiation revealed that relative humidity was the most influential weather variable. It showed that occurrence and distribution of the 20 genera corresponded well with three out of four Egyptian climatic regions: Mediterranean, semi-arid, and arid. Knowing pathogen occurrence and distribution in Egypt is the first step to developing future disease management strategies to limit yield losses and improve food security. Despite this study being conducted on the wheat-growing areas in Egypt, our findings are useful for other wheat-growing countries that share the same climatic conditions. The correlation between a given fungus and the climatic variables can be useful in other ecosystems.


2019 ◽  
Vol 10 (1) ◽  
Author(s):  
Hanh Tran ◽  
Hoa Nguyen Van ◽  
Rangaswamy Muniappan ◽  
James Amrine ◽  
Rayapati Naidu ◽  
...  

AbstractThis paper describes the current state of pests and diseases of longan (Dimocarpus longan Lour.) and their management in Vietnam. Longan is the third most cultivated fruit crop and second major fruit crop exported from Vietnam. Brief descriptions of arthropod pests Eriophyes dimocarpi Kuang (Acari: Eriophyidae), Conogethes punctiferalis Guenée (Lepidoptera: Crambidae), Conopomorpha sinensis Bradley (Lepidoptera: Gracillariidae), Conopomorpha litchiella Bradley (Lepidoptera: Gracillariidae), Tessaratoma papillosa Drury (Hemiptera: Tessaratomidae), Eudocima phalonia L. comb. (Lepidoptera: Erebidae), oriental fruit fly Bactrocera dorsalis Hendel (Diptera: Tephretidae), Planococcus lilacinus Cockerell (Hemiptera: Pseudococcidae), Drepanococcus chiton Green (Hemiptera: Coccidae), and Cornegenapsylla sinica Yang & Li (Hemiptera: Psyllidae) and fungal diseases Phytophthora palmivora Butler (Peronosporales: Peronosporaceae), Colletotrichum gloeosporioides (Penz.) Penz. & Sacc. (Incertaesedis: Glomerellaceae), and Ceratocystis fimbriata Ellis & Halsted (Microascales: Ceratocystidaceae) affecting longan are given. The longan witches’ broom syndrome is a major factor causing 50–86% annual crop loss in Vietnam and it has been considered the primary constraint in production. The causative agent of this syndrome has been identified as the eriophyid mite E. dimocarpi. Deployment of Integrated Pest Management strategies for longan production in Vietnam is outlined.


Plant Disease ◽  
2017 ◽  
Vol 101 (6) ◽  
pp. 994-1001 ◽  
Author(s):  
A. C. Scruggs ◽  
T. Basaiah ◽  
M. L. Adams ◽  
L. M. Quesada-Ocampo

Black rot of sweetpotato, caused by Ceratocystis fimbriata, has recently reemerged as a significant threat to sweetpotato production in North Carolina and other states across the United States. This disease has historically been controlled largely through cultural management strategies and, in some cases, fungicide application. The sudden and destructive reemergence of this disease in 2015 created the need for rapidly evaluating disease control strategies. Genetic diversity of current C. fimbriata isolates infecting sweetpotato in North Carolina was assessed using ITS, TEF, and MAT-2 sequences. All 50 tested isolates were confirmed to be of a single mating type, MAT-2, based on PCR amplification. Alignment of ITS, TEF, and MAT-2 sequences revealed all isolates were identical at each locus. Fourteen common sweetpotato cultivars and advanced breeding lines were screened for black rot resistance using two isolates. None of the cultivars were completely resistant to the disease and most were equally susceptible. ‘Stokes Purple’ and ‘Covington’ were the least susceptible, but significantly (P < 0.05) differed only from ‘Bellevue’, the most susceptible cultivar. Sensitivity of 50 C. fimbriata isolates to difenoconazole, fludioxonil, thiabendazole, dicloran, azoxystrobin, pyraclostrobin, fenamidone, and fluazinam was evaluated in vitro. Difenoconazole, thiabendazole, and fluazinam were most effective in reducing mycelia growth. Postharvest fungicide application on black rot-infected roots provided similar results. Low efficacy of dicloran, as well as a range of EC50 values among isolates, suggests potential resistance to this commonly applied fungicide. Results obtained in this study provide current and useful information so that improved recommendations can be made to reduce losses in sweetpotato to black rot.


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