scholarly journals In-stream habitat availability for river dolphins in response to flow: Use of ecological integrity to manage river flows

PLoS ONE ◽  
2021 ◽  
Vol 16 (7) ◽  
pp. e0241099
Author(s):  
Shambhu Paudel ◽  
John L. Koprowski ◽  
Usha Thakuri ◽  
Ajay Karki
Keyword(s):  
Extinction Risk ◽  
Biological Effects ◽  
Spatial Scales ◽  
Population Decline ◽  
Dry Season ◽  
Interactive Effects ◽  
Seasonal Effects ◽  
Life History Strategies ◽  
Flow Alteration ◽  
Longitudinal Connectivity

Population decline and extinction risk of river dolphins are primarily associated with flow alteration. Previous studies predominantly highlighted maintenance of adequate flow for low water seasons when habitats contract and the risk of local extinction escalates. Although river dolphins are sensitive to reduction in river flow, no studies quantify the relationships between flow and ecology of river dolphins to mitigate the potential adverse impacts of flow alteration. We quantify the relationships between flow and the ecology of river cetaceans concerning Ganges River dolphins (GRD; Platanista gangetica gangetica) usable area availability (AWS) for the low water season at wider flows (50–575 m3/s) at finer spatial and temporal scales. This study reveals that distribution of area usable to GRD is highly regulated by the adequate flow and river attributes (velocity and depth) interactions that likely offer energetically efficient modes of locomotion to GRD, suggesting the hydro-physical environment as a major determinant of river dolphin distribution and abundance. Flow and AWS relationships indicate that the flow during the dry season negatively contributed to AWS, whereas that of pre-monsoon maximized the AWS, suggesting that modifying flow regimes does alter in-stream habitats at varying spatial scales and may influence life-history strategies. Substantial fragmentation in suitable pool availability and loss of longitudinal connectivity exhibited by dry season flow suggested a higher risk of adverse biological effects during the dry season, which may reduce population viability by reducing survivorship and reproduction failure. Owing to river dolphins’ dependence on the attribute of freshwater flow, they can be expected to be more affected by flow regulations as interactive effects. Considering the seasonal effects and changes in the availability of usable areas by flow alteration, adopting effective habitat retention plans by water-based development projects appears critical to avoid further ecological risks in aquatic species conservation. Identifying priority riverscapes for river cetaceans and prioritizing investment opportunities is an essential first step towards effective riverine cetacean conservation.

scholarly journals In-stream habitat availability for river dolphins in response to flow: use of ecological integrity to manage river flows

2020 ◽  
Author(s):  
Shambhu Paudel ◽  
John L. Koprowski ◽  
Usha Thakuri
Keyword(s):  
Extinction Risk ◽  
Biological Effects ◽  
Spatial Scales ◽  
Population Decline ◽  
Dry Season ◽  
Interactive Effects ◽  
Seasonal Effects ◽  
Life History Strategies ◽  
Flow Alteration ◽  
Longitudinal Connectivity

AbstractPopulation decline and extinction risk of riverine cetaceans are primarily associated with flow alteration. Previous studies predominantly highlighted maintenance of adequate flow for low water seasons when habitats contract and the risk of local extinction escalates. Although riverine cetaceans are sensitive to reduction in river flow, no studies quantify the relationships between flow and ecology of riverine cetaceans to mitigate the potential adverse impacts of flow alteration. We quantify the relationships between flow and the ecology of river cetaceans with reference to Ganges River dolphins (GRD; Platanista gangetica gangetica) usable area availability (AWS) for the low water season at wider flows (50-575 m3/s) at finer spatial and temporal scales. This study reveals that distribution of usable area to GRD highly regulated by the adequate flow level as the interaction of appropriate velocity and depth at particular geomorphic that likely offer energetically efficient modes of locomotion to increase surfacing behavior efficiency, suggesting the hydro-physical environment as a major determinant of river cetaceans distribution and abundance. Flow and AWS relationships indicate that the flow during dry season negatively contributed to AWS, whereas that of pre-monsoon maximized the AWS, suggesting that modifying flow regimes does alter in-stream habitats at varying spatial scales and may influence life-history strategies. Substantial fragmentation in suitable pool availability and loss of longitudinal connectivity exhibited by dry season flow suggested a higher risk of adverse biological effects during the dry season, which may reduce population viability by reducing survivorship and reproduction failure. Owing to riverine cetaceans’ dependence on the attribute of freshwater flow, they can be expected to be more affected by flow regulations as interactive effects. Considering the seasonal effects and changes in the availability of usable areas by flow alteration, adopting effective habitat retention plans by water-based development projects appears critical to avoid further ecological risks in aquatic species conservation. Identifying priority riverscapes for river cetaceans and prioritizing investment opportunities is an essential first step towards effective riverine cetacean conservation.

scholarly journals Seasonal Differences in Cyclospora cayetanensis Prevalence in Colombian Indigenous People

2021 ◽  
Vol 9 (3) ◽  
pp. 627
Author(s):  
Hagen Frickmann ◽  
Juliane Alker ◽  
Jessica Hansen ◽  
Juan Carlos Dib ◽  
Andrés Aristizabal ◽  
...  
Keyword(s):  
Indigenous People ◽  
Rainy Season ◽  
Gastrointestinal Symptoms ◽  
Dry Season ◽  
Seasonal Effects ◽  
Chain Reaction ◽  
Resource Limited Settings ◽  
Resource Limited ◽  
Stool Samples ◽  
Polymerase Chain

Fecal-orally transmitted cyclosporiasis is frequent in remote resource-limited settings in Central and South America with poor hygiene conditions. In this study, we aimed at assessing seasonal effects on the epidemiology of colonization or infection with C. cayetanensis in Colombian indigenous people living under very restricted conditions. In the rainy season between July and November and in the dry season between January and April, stool samples from indigenous people with and without gastrointestinal symptoms were collected and screened for C. cayetanensis applying in-house real-time polymerase chain reaction (PCR). In the rainy season and in the dry season, positive PCR results were observed for 11.8% (16/136) and 5.1% (15/292), respectively, with cycle threshold (Ct) values of 30.6 (±3.4) and 34.4 (±1.6), respectively. Despite higher parasite loads in the rainy season, fewer individuals (2/16, 12.5%) reported gastrointestinal symptoms compared to the dry season (6/15, 40%). In conclusion, considerable prevalence of C. cayetanensis in Colombian indigenous people persists in the dry season. Low proportions of gastrointestinal symptoms along with higher parasite loads make colonization likely rather than infection.

Metabolic Stores of Yellow Perch (Perca flavescens): Comparison of Populations from an Acidic, Dystrophic Lake and Circumneutral, Mesotrophic Lakes

1992 ◽  
Vol 49 (12) ◽  
pp. 2474-2482 ◽  
Author(s):  
Jay A. Nelson ◽  
John J. Magnuson
Keyword(s):  
Yellow Perch ◽  
Egg Production ◽  
Glycogen Content ◽  
Physiological State ◽  
Perca Flavescens ◽  
Population Level ◽  
Seasonal Effects ◽  
Life History Strategies ◽  
Dystrophic Lake ◽  
Lipid Contents

Little is known about the animals that occupy naturally acidic habitats. To better understand the physiological state of animals from temperate, naturally acidic systems, we compared metabolite stores and meristics of two yellow perch (Perca flavescens) populations in northern Wisconsin. One population originated from a naturally acidic, dystrophic lake (Acid-Lake-Perch, ALP) and had previously been shown to have enhanced tolerance to low pH. The second population came from two nearby interconnected circumneutral, mesotrophic lakes (Neutral-Lake-Perch, NLP). Perch were collected throughout the year to account for seasonal effects and to discern whether patterns of metabolite utilization differed between populations. ALP had smaller livers containing less glycogen and greater muscle glycogen content than NLP. The ALP also had significantly greater liver and visceral lipid contents, and females from this population committed a greater fraction of their body mass to egg production. We interpret these results as indicative of physiological divergence at the population level in yellow perch. These results are discussed as possible products of H+ -driven changes in metabolism and as possible products of different life history strategies between populations. Our results also show that perch living in acidic, dystrophic Wharton Lake are not acid stressed.

scholarly journals Forest management impacts on stream integrity at varying intensities and spatial scales: Do biological effects accumulate spatially?

2021 ◽  
Vol 763 ◽  
pp. 144043
Author(s):  
Maitane Erdozain ◽  
Karen A. Kidd ◽  
Erik J.S. Emilson ◽  
Scott S. Capell ◽  
Taylor Luu ◽  
...  
Keyword(s):  
Forest Management ◽  
Biological Effects ◽  
Spatial Scales

Conservation biology of marine fishes: perceptions and caveats regarding assignment of extinction risk

2001 ◽  
Vol 58 (1) ◽  
pp. 108-121 ◽  
Author(s):  
Jeffrey A Hutchings
Keyword(s):  
Population Size ◽  
Extinction Risk ◽  
Population Decline ◽  
Empirical Support ◽  
Marine Fishes ◽  
Marine Biodiversity ◽  
Population Declines ◽  
High Fecundity ◽  
Reproductive Rates ◽  
Biological Extinction

Quantitative criteria used to assign species to categories of extinction risk may seriously overestimate these risks for marine fishes. Contemporary perception is that marine fishes may be less vulnerable to extinction than other taxa, because of great natural variability in abundance, high fecundity, rapid population growth, and an intrinsically high capability of recovering from low population size. Contrary to perception, however, there appears to be generally little theoretical or empirical support for the hypotheses that marine fish are more likely to experience large reductions in population size, to produce unusually high levels of recruitment, to have higher reproductive rates, or to recover more rapidly from prolonged population declines than nonmarine fishes. Although existing population-decline criteria may not accurately reflect probabilities of biological extinction, they do appear to reflect the converse-population recovery. Insufficient support for contemporary perceptions of their susceptibility to extinction, coupled with caveats associated with the assignment of extinction risk, suggest that significant increases in the population-decline thresholds used to assign marine fishes to at-risk categories would be inconsistent with a precautionary approach to fisheries management and the conservation of marine biodiversity.

Effects of seasonal variation and locations on microbial load in sediment and water of a polluted ecosystem

2021 ◽  
Vol 36 (1) ◽  
pp. 93-105
Author(s):  
A.N. Okereke ◽  
J.C. Ike-Obasi
Keyword(s):  
Heterotrophic Bacteria ◽  
Standard Procedure ◽  
Dry Season ◽  
Microbial Load ◽  
Seasonal Effects ◽  
Wet Season ◽  
Different Seasons ◽  
Dry Seasons ◽  
Total Fungi ◽  
Hydrocarbon Utilizing Bacteria

Seasonal effects on microbial load of sediment and water at different locations along Bonny Estuary of Niger Delta was investigated for a period of 12 months. All analyses followed standard procedure. Results revealed that total fungi counts in sediment and water at different locations were not significantly different (p > 0.05) at both wet and dry seasons while hydrocarbon utilizing fungi showed significant differences (p < 0.05) at both seasons in both sediment and water samples. During the wet season, total faecal counts ranged from 5.0 to 10.0 x 105 CFU/g for sediment and 4.0 to 7.0x 105 CFU/g in water. In dry season, the concentration of hydrocarbon utilizing bacteria in the sediment ranged between 0.1 x 105 CFU/ml/g and 8.0 x 105 CFU/ml/g in wet season while in dry season, the concentration in water ranged between 0.1 x 105 CFU/ml/g and 6.0 x 105 CFU/ml/g at Abuloma. At Okwujagu, total heterotrophic bacteria counts in sediment ranged  from 0.1 to 8.0 x 105 CFU/g in dry season. This was higher than the range 0.1 to 6.8.0 x 105 CFU/ recorded in Abuloma, Okwujagu and Slaughter at dry season. The highest vibrio counts in water (11.0 x 105 CFU/ml) for wet and (10.0 x 105 CFU/ml) for dry seasons were recorded at Slaughter. In Oginiba, the feacal count recorded 3.0 x 105 CFU/ml in water during the wet season and 2.0 x 105 CFU/ml for dry season. Generally, there were significant differences (p < 0.05) in the bacterial concentrations in both sediment and water. This showed that different seasons favour the growth of certain microbial types.

Influence of historical and contemporary habitat changes on the population genetics of the endemic South African parrot Poicephalus robustus

2019 ◽  
Vol 30 (2) ◽  
pp. 236-259
Author(s):  
WILLEM G. COETZER ◽  
COLLEEN T. DOWNS ◽  
MIKE R. PERRIN ◽  
SANDI WILLOWS-MUNRO
Keyword(s):  
Climate Change ◽  
South Africa ◽  
Spatial Scales ◽  
Population Decline ◽  
Source Population ◽  
Population Bottlenecks ◽  
Eastern Cape ◽  
Forest Patches ◽  
In The Wild ◽  
Fragmented Forests

SummaryThe Cape Parrot Poicephalus robustus is a habitat specialist, restricted to forest patches in the Eastern Cape (EC), KwaZulu-Natal (KZN) and Limpopo provinces of South Africa. Recent census estimates suggest that there are less than 1,600 parrots left in the wild, although historical data suggest that the species was once more numerous. Fragmentation of the forest biome is strongly linked to climate change and exploitation of the forest by the timber industry. We examine the subpopulation structure and connectivity between fragmented populations across the distribution of the species. Differences in historical and contemporary genetic structure of Cape Parrots is examined by including both modern samples, collected from 1951 to 2014, and historical samples, collected from 1870 to 1946. A total of 114 individuals (historical = 29; contemporary = 85) were genotyped using 16 microsatellite loci. We tested for evidence of partitioning of genotypes at both a temporal and spatial scales by comparing shifts in allelic frequencies of historical (1870–1946) and contemporary (1951–2014) samples across the distribution of the species. Tests for population bottlenecks were also conducted to determine if anthropogenic causes are the main driver of population decline in this species. Analyses identified three geographically correlated genetic clusters. A southern group restricted to forest patches in the EC, a central group including birds from KZN and a genetically distinct northern Limpopo cluster. Results suggest that Cape Parrots have experienced at least two population bottlenecks. An ancient decline during the mid-Holocene (∼ 1,800-3,000 years before present) linked to climate change, and a more recent bottleneck, associated with logging of forests during the early 1900s. This study highlights the effects of climate change and human activities on an endangered species associated with the naturally fragmented forests of eastern South Africa. These results will aid conservation authorities with the planning and implementation of future conservation initiatives. In particular, this study emphasises the Eastern Cape mistbelt forests as an important source population for the species and calls for stronger conservation of forest patches in South Africa to promote connectivity of forest taxa.

scholarly journals The dynamics underlying avian extinction trajectories forecast a wave of extinctions

2019 ◽  
Vol 15 (12) ◽  
pp. 20190633 ◽  
Author(s):  
Melanie J. Monroe ◽  
Stuart H. M. Butchart ◽  
Arne O. Mooers ◽  
Folmer Bokma
Keyword(s):  
Extinction Risk ◽  
Population Decline ◽  
Bird Species ◽  
Iucn Red List ◽  
Red List ◽  
Extinction Rate ◽  
Critically Endangered Species ◽  
Extinction Rates ◽  
Historical Times ◽  
Risk Categories

Population decline is a process, yet estimates of current extinction rates often consider just the final step of that process by counting numbers of species lost in historical times. This neglects the increased extinction risk that affects a large proportion of species, and consequently underestimates the effective extinction rate. Here, we model observed trajectories through IUCN Red List extinction risk categories for all bird species globally over 28 years, and estimate an overall effective extinction rate of 2.17 × 10 −4 /species/year. This is six times higher than the rate of outright extinction since 1500, as a consequence of the large number of species whose status is deteriorating. We very conservatively estimate that global conservation efforts have reduced the effective extinction rate by 40%, but mostly through preventing critically endangered species from going extinct rather than by preventing species at low risk from moving into higher-risk categories. Our findings suggest that extinction risk in birds is accumulating much more than previously appreciated, but would be even greater without conservation efforts.

scholarly journals Integrating behaviour and ecology into global biodiversity conservation strategies

2019 ◽  
Vol 374 (1781) ◽  
pp. 20190012 ◽  
Author(s):  
Joseph A. Tobias ◽  
Alex L. Pigot
Keyword(s):  
Extinction Risk ◽  
Spatial Scales ◽  
Bird Species ◽  
Ecological Factors ◽  
Population Pressure ◽  
Conservation Strategies ◽  
Conservation Practice ◽  
Latent Extinction ◽  
Conservation Assessments ◽  
And Migration

Insights into animal behaviour play an increasingly central role in species-focused conservation practice. However, progress towards incorporating behaviour into regional or global conservation strategies has been more limited, not least because standardized datasets of behavioural traits are generally lacking at wider taxonomic or spatial scales. Here we make use of the recent expansion of global datasets for birds to assess the prospects for including behavioural traits in systematic conservation priority-setting and monitoring programmes. Using International Union for Conservation of Nature Red List classifications for more than 9500 bird species, we show that the incidence of threat can vary substantially across different behavioural categories, and that some types of behaviour—including particular foraging, mating and migration strategies—are significantly more threatened than others. The link between behavioural traits and extinction risk is partly driven by correlations with well-established geographical and ecological factors (e.g. range size, body mass, human population pressure), but our models also reveal that behaviour modifies the effect of these factors, helping to explain broad-scale patterns of extinction risk. Overall, these results suggest that a multi-species approach at the scale of communities, continents and ecosystems can be used to identify and monitor threatened behaviours, and to flag up cases of latent extinction risk, where threatened status may currently be underestimated. Our findings also highlight the importance of comprehensive standardized descriptive data for ecological and behavioural traits, and point the way towards deeper integration of behaviour into quantitative conservation assessments. This article is part of the theme issue ‘Linking behaviour to dynamics of populations and communities: application of novel approaches in behavioural ecology to conservation’.

scholarly journals Predicting how populations decline to extinction

2011 ◽  
Vol 366 (1577) ◽  
pp. 2577-2586 ◽  
Author(s):  
Ben Collen ◽  
Louise McRae ◽  
Stefanie Deinet ◽  
Adriana De Palma ◽  
Tharsila Carranza ◽  
...  
Keyword(s):  
At Risk ◽  
Extinction Risk ◽  
Mammalian Species ◽  
Local Population ◽  
Population Decline ◽  
Scale Up ◽  
Population Level ◽  
Biological Traits ◽  
Population Declines ◽  
Trend Data

Global species extinction typically represents the endpoint in a long sequence of population declines and local extinctions. In comparative studies of extinction risk of contemporary mammalian species, there appear to be some universal traits that may predispose taxa to an elevated risk of extinction. In local population-level studies, there are limited insights into the process of population decline and extinction. Moreover, there is still little appreciation of how local processes scale up to global patterns. Advancing the understanding of factors which predispose populations to rapid declines will benefit proactive conservation and may allow us to target at-risk populations as well as at-risk species. Here, we take mammalian population trend data from the largest repository of population abundance trends, and combine it with the PanTHERIA database on mammal traits to answer the question: what factors can be used to predict decline in mammalian abundance? We find in general that environmental variables are better determinants of cross-species population-level decline than intrinsic biological traits. For effective conservation, we must not only describe which species are at risk and why, but also prescribe ways to counteract this.

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