Combating Fungicide Resistant Crop Pathogens: Discovery of Metyltetraprole

2020 ◽  
Vol 31 (2) ◽  
pp. 74-76
Author(s):  
Yuichi Matsuzaki ◽  
Yuya Yoshimoto ◽  
Sadayuki Arimori ◽  
Toshiyuki Harada ◽  
Fukumatsu Iwahashi

The call for chemical load reduction on farmland has become stronger in recent years. Nevertheless, conventional farming systems achieving high yields can contribute to conservation by preventing additional natural habitats from being converted to farmland; indeed limiting the expansion of farmland seems to be more beneficial for the environment when compared to low yielding “eco-friendly agriculture”. Conserved non-farmland can also serve as carbon storage areas limiting carbon emissions. However, it has also been shown that intensive farming with high yield potential can be associated with an elevated risk of pests and diseases. To minimize the risk of both chemical overloading and yield loss, utilization of highly effective crop protection products with improved safety would be an important action for the agricultural industry. Such pragmatic insights have motivated many researchers developing improved agrochemicals. In fact, the chemical input on farmland has decreased dramatically since the invention of modern synthetic agrochemicals when compared to non-selective toxic chemicals such as arsenic and organomercury, which were used during the early days of pesticide use. Since synthetic agrochemicals were first used, their amount has been gradually decreasing thanks to their improved efficiency per chemical unit. For example, sulfur for controlling powdery mildew required thousands of grams per hectare while benzimidazoles, one of the first synthetic systemic fungicides, only requires hundreds of grams per hectare to be effective. Moreover, recent compounds launched in the 21st century are generally applied at around 100 grams per hectare, showing further reduction in quantities of agrochemicals used. However, the use of such modern synthetic agrochemicals in agriculture is under increasing threat. One is an increasing restriction of the usage of chemicals. Another is the development of resistance to agrochemicals in agricultural pathogens, pests, and weeds owing to selection pressure by crop protection products. For example, the number of reported weed species that have acquired resistance to glyphosate is increasing each year, driving the introduction of new generation genetically modified (GMO) crops with traits of auxin herbicide tolerance. All of the biggest three fungicide classes used by farmers globally (DMIs demethylation inhibitors)-, QoIs – quinone outside inhibitors, and SDHIs – succinate dehydrogenase inhibitors) are now threatened by resistant populations of key crop pathogens, including Zymoseptoria tritici, the causal agent of septoria tritici blotch of wheat in Europe. These three groups of chemicals make up more than 70% of global fungicide use, with few alternative choices showing equivalent efficacy and spectrum (based on product area treated). Furthermore, the introduction of newer chemical classes is very limited, owing to the difficulty in achieving a combination of effectiveness as a fungicide, mammalian and environmental safety, and economic feasibility in terms of costs of production and development. Metyltetraprole is a new tool to combat current problematic fungicide-resistant populations of key pathogens. The aim is to deliver this innovative modern technology to many users who have difficulty in managing crop diseases, in order to contribute to global sustainability by maintaining the efficiency of food production in the existing farmlands.

Plant Disease ◽  
2017 ◽  
Vol 101 (4) ◽  
pp. 544-549 ◽  
Author(s):  
Hayet Meamiche Neddaf ◽  
Lamia Aouini ◽  
Zouaoui Bouznad ◽  
Gert H. J. Kema

Zymoseptoria tritici, the causal agent of septoria tritici blotch, is an important wheat pathogen responsible for high yield losses worldwide. The assessment of the distribution of both mating type idiomorphs was studied in several wheat-growing areas in North Algeria. Both mating types occurred at all spatial scales tested and showed an equal frequency distribution at the country level, with 53% for Mat1-1 and 47% for Mat1-2. At finer scales, co-occurrence of both mating types was found in 38% of leaves analyzed and 44% of the studied lesions. Additionally, efficacy reduction of strobilurin applications prompted us to study strobilurin resistance conferred by the G143A substitution in the mitochondrial cytochrome b gene, which was found for the first time in six strains. The results suggest that the Algerian Z. tritici population undergoes frequent sexual reproduction mirrored by co-occurrence of both mating types, which likely will rapidly increase the fraction of strobilurin-resistant isolates in the Algerian population, as has been shown in all other regions where strobilurin resistance surfaced.


2019 ◽  
Vol 109 (3) ◽  
pp. 409-417 ◽  
Author(s):  
Geraldine Le Mire ◽  
Ali Siah ◽  
Brice Marolleau ◽  
Matthieu Gaucher ◽  
Claude Maumené ◽  
...  

Wheat crops are constantly challenged by the pathogen Zymoseptoria tritici, responsible for Septoria tritici Blotch (STB) disease. The present study reports the evaluation of five elicitor compounds (λ-carrageenan, cytosine-phosphate-guanine oligodesoxynucleotide motifs [CpG ODN], glycine betaine, Spirulina platensis, and ergosterol) for the protection of wheat against STB in order to offer new alternative tools to farmers for sustainable crop protection. Screening of elicitors of wheat defenses was carried out through a succession of experiments: biocidal in vitro tests enabled checking for any fungicidal activities, glasshouse experiments allowed determination of the efficacy of a given compound in protecting wheat against STB, and quantitative reverse-transcription polymerase chain reaction biomolecular tests investigated the relative expression of 23 defense genes in treated versus untreated plants. Therefore, we demonstrated that λ-carrageenan, CpG-ODN, glycine betaine, S. platensis, and ergosterol are potential elicitors of wheat defenses. Foliar treatment with these compounds conferred protection of wheat by up to approximately 70% against Z. tritici under semicontrolled conditions and induced both salicylic acid- and jasmonic acid-dependent signaling pathways in the plant. These findings contribute to extending the narrow list of potential elicitors of wheat defenses against Z. tritici.


2017 ◽  
Author(s):  
Graeme J. Kettles ◽  
Carlos Bayon ◽  
Caroline A. Sparks ◽  
Gail Canning ◽  
Kostya Kanyuka ◽  
...  

Abstract-The fungus Zymoseptoria tritici is the causal agent of Septoria Tritici Blotch (STB) disease of wheat leaves. Z. tritici secretes many functionally uncharacterised effector proteins during infection. Here we characterised a secreted ribonuclease (Zt6) with an unusual biphasic expression pattern.-Transient expression systems were used to characterise Zt6, and mutants thereof, in both host and non-host plants. Cell-free protein expression systems monitored impact of Zt6 protein on functional ribosomes, and in vitro assays of cells treated with recombinant Zt6 determined toxicity against bacteria, yeasts and filamentous fungi.-We demonstrated that Zt6 is a functional ribonuclease and that phytotoxicity is dependent on both the presence of a 22-amino acid N-terminal “loop” region and its catalytic activity. Zt6 selectively cleaves both plant and animal rRNA species, and is toxic to wheat, tobacco, bacterial and yeast cells but not to Z. tritici itself.-Zt6 is the first Z. tritici effector demonstrated to have a likely dual functionality. The expression pattern of Zt6 and potent toxicity towards microorganisms suggests that whilst it may contribute to the execution of wheat cell death, it is also likely to have an important secondary function in antimicrobial competition and niche protection.


2019 ◽  
Vol 58 (1) ◽  
pp. 27-33
Author(s):  
S. Kildea ◽  
D.E. Bucar ◽  
F. Hutton ◽  
S. de la Rosa ◽  
T.E. Welch ◽  
...  

Abstract The emergence and spread of Quinone outside Inhibitor (QoI) fungicide resistance in the Irish Zymoseptoria tritici population in the early 2000s had immediate impacts on the efficacy of the entire group of fungicides for the control of septoria tritici blotch. As a result, a dramatic reduction in the quantities applied to winter wheat occurred in the following seasons. Even in the absence of these fungicides, the frequency of the resistance allele, G143A in the pathogens mtDNA has remained exceptionally high (>97%), and as such, it can be anticipated that continued poor efficacy of current QoI fungicides will be observed. Amongst the isolates with G143A, differences in sensitivity to the QoI pyraclostrobin were observed in vitro. The addition of the alternative oxidase (AOX) inhibitor salicylhydroxamic acid increased sensitivity in these isolates, suggesting some continued impairment of respiration by the QoI fungicides, albeit weak. Interestingly, amongst those tested, the strains from a site with a high frequency of inserts in the MFS1 transporter gene known to enhance QoI efflux did not exhibit this increase in sensitivity. A total of 19 mtDNA haplotypes were detected amongst the 2017 strain collection. Phylogenetic analysis confirmed the suggestion of a common ancestry of all the haplotypes, even though three of the haplotypes contained at least one sensitive strain.


Author(s):  
Tony Twamley ◽  
Mark Gaffney ◽  
Angela Feechan

AbstractFusarium graminearum and Zymoseptoria tritici cause economically important diseases of wheat. F. graminearum is one of the primary causal agents of Fusarium head blight (FHB) and Z. tritici is the causal agent of Septoria tritici blotch (STB). Alternative control methods are required in the face of fungicide resistance and EU legislation which seek to cut pesticide use by 2030. Both fungal pathogens have been described as either hemibiotrophs or necrotrophs. A microbial fermentation-based product (MFP) was previously demonstrated to control the biotrophic pathogen powdery mildew, on wheat. Here we investigated if MFP would be effective against the non-biotrophic fungal pathogens of wheat, F. graminearum and Z. tritici. We assessed the impact of MFP on fungal growth, disease control and also evaluated the individual constituent parts of MFP. Antifungal activity towards both pathogens was found in vitro but MFP only significantly decreased disease symptoms of FHB in planta. In addition, MFP was found to improve the grain number and weight, of uninfected and F. graminearum infected wheat heads.


2019 ◽  
Author(s):  
Lydie Kerdraon ◽  
Matthieu Barret ◽  
Valérie Laval ◽  
Frédéric Suffert

AbstractBackgroundWheat residues are a crucial determinant of the epidemiology of Septoria tritici blotch, as they support the sexual reproduction of the causal agent Zymoseptoria tritici. We aimed to characterize the effect of infection with this fungal pathogen on the microbial communities present on wheat residues, and to identify microorganisms interacting with it. We used metabarcoding to characterize the microbiome associated with wheat residues placed outdoors, with and without preliminary Z. tritici inoculation, comparing a first set of residues in contact with the soil and a second set without contact with the soil, on four sampling dates in two consecutive years.ResultsThe diversity of the tested conditions, leading to the establishment of different microbial communities according to the origins of the constitutive taxa (plant only, or plant and soil), highlighted the effect of Z. tritici on the wheat residue microbiome. Several microorganisms were affected by Z. tritici infection, even after the disappearance of the pathogen. Linear discriminant analyses and ecological network analyses were combined to describe the communities affected by infection. The number of fungi and bacteria promoted or inhibited by inoculation with Z. tritici decreased over time, and was smaller for residues in contact with the soil. The interactions between the pathogen and other microorganisms appeared to be mostly indirect, despite the strong position of the pathogen as a keystone taxon in networks. Direct interactions with other members of the communities mostly involved fungi, including other wheat pathogens. Our results provide essential information about the alterations to the microbial community in wheat residues induced by the mere presence of a fungal pathogen, and vice versa. Species already described as beneficial or biocontrol agents were found to be affected by pathogen inoculation.ConclusionsThe strategy developed here can be viewed as a proof-of-concept focusing on crop residues as a particularly rich ecological compartment, with a high diversity of fungal and bacterial taxa originating from both the plant and soil compartments, and for Z. tritici-wheat as a model pathosystem. By revealing putative antagonistic interactions, this study paves the way for improving the biological control of residue-borne diseases.


2021 ◽  
pp. 303-356
Author(s):  
Harsh Raman ◽  

Septoria tritici blotch (STB), caused by the hemibiotrophic fungus Zymoseptoria tritici, is one of the most important foliar diseases of winter cereal crops. Recent advances are helping to understand the genetic basis and architecture of resistance to STB. To date, at least 22 genes for qualitative resistance and over 200 quantitative trait loci (QTL) for quantitative resistance have been identified in cereals. This knowledge is enabling cereal breeding programs to develop varieties with more durable resistance to STB. This chapter reviews recent research on genetic resistance loci and breeding strategies based on both conventional and biotechnology-based breeding approaches (molecular marker/genomic-assisted breeding, genetic transformation, and gene-editing) to achieve achieving durable resistance to STB infection and minimise grain yield losses.


Plant Disease ◽  
2016 ◽  
Vol 100 (2) ◽  
pp. 483-489 ◽  
Author(s):  
Laura E. Hayes ◽  
Kathryn E. Sackett ◽  
Nicole P. Anderson ◽  
Michael D. Flowers ◽  
Christopher C. Mundt

Plant pathogens pose a major challenge to maintaining food security in many parts of the world. Where major plant pathogens are fungal, fungicide resistance can often thwart regional control efforts. Zymoseptoria tritici, causal agent of Septoria tritici blotch, is a major fungal pathogen of wheat that has evolved resistance to chemical control products in four fungicide classes in Europe. Compared with Europe, however, fungicide use has been less and studies of fungicide resistance have been infrequent in North American Z. tritici populations. Here, we confirm first reports of Z. tritici fungicide resistance evolution in western Oregon through analysis of the effects of spray applications of propiconazole and an azoxystrobin + propiconazole mixture during a single growing season. Frequencies of strobilurin-resistant isolates, quantified as proportions of G143A mutants, were significantly higher in azoxystrobin-sprayed plots compared with plots with no azoxystrobin treatment at two different locations and were significantly higher in plots of a moderately resistant cultivar than in plots of a susceptible cultivar. Thus, it appears that western Oregon Z. tritici populations have the potential to evolve levels of strobilurin resistance similar to those observed in Europe. Although the concentration of propiconazole required to reduce pathogen growth by 50% values were numerically greater for isolates collected from plots receiving propiconazole than in control plots, this effect was not significant (P > 0.05).


2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Helen N. Fones

Abstract Zymoseptoria tritici causes Septoria tritici blotch (STB) of wheat, an economically important disease causing yield losses of up to 10% despite the use of fungicides and resistant cultivars. Z. tritici infection is symptomless for around 10 days, during which time the fungus grows randomly across the leaf surface prior to entry through stomata. Wounded leaves show faster, more extensive STB, suggesting that wounds facilitate fungal entry. Wheat leaves also host epiphytic bacteria; these include ice-nucleating (INA+) bacteria, which induce frost damage at warmer temperatures than it otherwise occurs. Here, STB is shown to be more rapid and severe when wheat is exposed to both INA+ bacteria and sub-zero temperatures. This suggests that ice-nucleation-induced wounding of the wheat leaf provides additional openings for fungal entry. INA+ bacterial populations are shown to benefit from the presence of Z. tritici, indicating that this microbial interaction is mutualistic. Finally, control of INA+ bacteria is shown to reduce STB.


2020 ◽  
Author(s):  
Ailsing Reilly ◽  
Sujit Jung Karki ◽  
Anthony Twamley ◽  
Anna M.M Tiley ◽  
Steven Kildea ◽  
...  

Septoria tritici blotch (STB) is an important foliar disease of wheat that is caused by the fungal pathogen Zymoseptoria tritici. The grass Brachypodium distachyon has been used previously as a model system for cereal-pathogen interactions. In this study, we examined the non-host resistance (NHR) response of B. distachyon to two different Z. tritici isolates in comparison to wheat. These isolates vary in aggressiveness on wheat cv. Remus displaying significant differences in disease and pycnidia coverage. Using microscopy, we found that similar isolate specific responses were observed for H2O2 accumulation and cell death in both wheat and B. distachyon. Despite this, induction of isolate specific patterns of defence gene expression by Z. tritici did differ between B. distachyon and wheat. Our results suggest that phenylalanine ammonia lyase (PAL) expression may be important for NHR in B. distachyon while pathogenesis-related (PR) genes and expression of genes regulating reactive oxygen species (ROS) may be important to limit disease in wheat. Future studies of the B. distachyon-Z. tritici interaction may allow identification of conserved plant immunity targets which are responsible for the isolate specific responses observed in both plant species.


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