scholarly journals Partial Label Learning with Self-Guided Retraining

2019 ◽  
Vol 33 ◽  
pp. 3542-3549 ◽  
Author(s):  
Lei Feng ◽  
Bo An
Keyword(s):  
Real World ◽  
Optimization Problem ◽  
State Of The Art ◽  
Ground Truth ◽  
Learning Approaches ◽  
High Confidence ◽  
Infinity Norm ◽  
Real World Datasets ◽  
Partial Label Learning ◽  
Optimization Efficiency

Partial label learning deals with the problem where each training instance is assigned a set of candidate labels, only one of which is correct. This paper provides the first attempt to leverage the idea of self-training for dealing with partially labeled examples. Specifically, we propose a unified formulation with proper constraints to train the desired model and perform pseudo-labeling jointly. For pseudo-labeling, unlike traditional self-training that manually differentiates the ground-truth label with enough high confidence, we introduce the maximum infinity norm regularization on the modeling outputs to automatically achieve this consideratum, which results in a convex-concave optimization problem. We show that optimizing this convex-concave problem is equivalent to solving a set of quadratic programming (QP) problems. By proposing an upper-bound surrogate objective function, we turn to solving only one QP problem for improving the optimization efficiency. Extensive experiments on synthesized and real-world datasets demonstrate that the proposed approach significantly outperforms the state-of-the-art partial label learning approaches.

scholarly journals Contrastive self-supervised clustering of scRNA-seq data

2021 ◽  
Vol 22 (1) ◽  
Author(s):  
Madalina Ciortan ◽  
Matthieu Defrance
Keyword(s):  
Real World ◽  
Clustering Analysis ◽  
Network Architecture ◽  
Clustering Algorithm ◽  
Performance Metrics ◽  
State Of The Art ◽  
Ground Truth ◽  
Second Phase ◽  
Training Phase ◽  
Real World Datasets

Abstract Background Single-cell RNA sequencing (scRNA-seq) has emerged has a main strategy to study transcriptional activity at the cellular level. Clustering analysis is routinely performed on scRNA-seq data to explore, recognize or discover underlying cell identities. The high dimensionality of scRNA-seq data and its significant sparsity accentuated by frequent dropout events, introducing false zero count observations, make the clustering analysis computationally challenging. Even though multiple scRNA-seq clustering techniques have been proposed, there is no consensus on the best performing approach. On a parallel research track, self-supervised contrastive learning recently achieved state-of-the-art results on images clustering and, subsequently, image classification. Results We propose contrastive-sc, a new unsupervised learning method for scRNA-seq data that perform cell clustering. The method consists of two consecutive phases: first, an artificial neural network learns an embedding for each cell through a representation training phase. The embedding is then clustered in the second phase with a general clustering algorithm (i.e. KMeans or Leiden community detection). The proposed representation training phase is a new adaptation of the self-supervised contrastive learning framework, initially proposed for image processing, to scRNA-seq data. contrastive-sc has been compared with ten state-of-the-art techniques. A broad experimental study has been conducted on both simulated and real-world datasets, assessing multiple external and internal clustering performance metrics (i.e. ARI, NMI, Silhouette, Calinski scores). Our experimental analysis shows that constastive-sc compares favorably with state-of-the-art methods on both simulated and real-world datasets. Conclusion On average, our method identifies well-defined clusters in close agreement with ground truth annotations. Our method is computationally efficient, being fast to train and having a limited memory footprint. contrastive-sc maintains good performance when only a fraction of input cells is provided and is robust to changes in hyperparameters or network architecture. The decoupling between the creation of the embedding and the clustering phase allows the flexibility to choose a suitable clustering algorithm (i.e. KMeans when the number of expected clusters is known, Leiden otherwise) or to integrate the embedding with other existing techniques.

scholarly journals Learning From Multi-Dimensional Partial Labels

2020 ◽  
Author(s):  
Haobo Wang ◽  
Weiwei Liu ◽  
Yang Zhao ◽  
Tianlei Hu ◽  
Ke Chen ◽  
...  
Keyword(s):  
Real World ◽  
Ground Truth ◽  
Empirical Risk Minimization ◽  
Risk Minimization ◽  
Large Loss ◽  
Empirical Risk ◽  
Dimensional Classification ◽  
Real World Datasets ◽  
Partial Label Learning ◽  
Real Practice

Multi-dimensional classification has attracted huge attention from the community. Though most studies consider fully annotated data, in real practice obtaining fully labeled data in MDC tasks is usually intractable. In this paper, we propose a novel learning paradigm: MultiDimensional Partial Label Learning (MDPL) where the ground-truth labels of each instance are concealed in multiple candidate label sets. We first introduce the partial hamming loss for MDPL that incurs a large loss if the predicted labels are not in candidate label sets, and provide an empirical risk minimization (ERM) framework. Theoretically, we rigorously prove the conditions for ERM learnability of MDPL in both independent and dependent cases. Furthermore, we present two MDPL algorithms under our proposed ERM framework. Comprehensive experiments on both synthetic and real-world datasets validate the effectiveness of our proposals.

scholarly journals Positive and Unlabeled Learning with Label Disambiguation

2019 ◽  
Author(s):  
Chuang Zhang ◽  
Dexin Ren ◽  
Tongliang Liu ◽  
Jian Yang ◽  
Chen Gong
Keyword(s):  
State Of The Art ◽  
Ground Truth ◽  
Training Data ◽  
Learning Approaches ◽  
Generalization Error ◽  
Binary Classifier ◽  
Learning Problem ◽  
Pu Learning ◽  
Positive And Unlabeled Learning ◽  
Real World Datasets

Positive and Unlabeled (PU) learning aims to learn a binary classifier from only positive and unlabeled training data. The state-of-the-art methods usually formulate PU learning as a cost-sensitive learning problem, in which every unlabeled example is simultaneously treated as positive and negative with different class weights. However, the ground-truth label of an unlabeled example should be unique, so the existing models inadvertently introduce the label noise which may lead to the biased classifier and deteriorated performance. To solve this problem, this paper  proposes a novel algorithm dubbed as "Positive and Unlabeled learning with Label Disambiguation'' (PULD). We first regard all the unlabeled examples in PU learning as ambiguously labeled as positive and negative, and then employ the margin-based label disambiguation strategy, which enlarges the margin of classifier response between the most likely label and the less likely one, to find the unique ground-truth label of each unlabeled example. Theoretically, we derive the generalization error bound of the proposed method by analyzing its Rademacher complexity. Experimentally, we conduct intensive experiments on both benchmark and real-world datasets, and the results clearly demonstrate the superiority of the proposed PULD to the existing PU learning approaches.

scholarly journals Discriminative and Correlative Partial Multi-Label Learning

2019 ◽  
Author(s):  
Haobo Wang ◽  
Weiwei Liu ◽  
Yang Zhao ◽  
Chen Zhang ◽  
Tianlei Hu ◽  
...  
Keyword(s):  
Real World ◽  
State Of The Art ◽  
Feature Space ◽  
Gradient Boosting ◽  
Training Procedure ◽  
Second Stage ◽  
Label Correlations ◽  
Real World Datasets ◽  
Partial Label Learning ◽  
Confidence Value

In partial label learning (PML), each instance is associated with a candidate label set that contains multiple relevant labels and other false positive labels. The most challenging issue for the PML is that the training procedure is prone to be affected by the labeling noise. We observe that state-of-the-art PML methods are either powerless to disambiguate the correct labels from the candidate labels or incapable of extracting the label correlations sufficiently. To fill this gap, a two-stage DiscRiminative and correlAtive partial Multi-label leArning (DRAMA) algorithm is presented in this work. In the first stage, a confidence value is learned for each label by utilizing the feature manifold, which indicates how likely a label is correct. In the second stage, a gradient boosting model is induced to fit the label confidences. Specifically, to explore the label correlations, we augment the feature space by the previously elicited labels on each boosting round. Extensive experiments on various real-world datasets clearly validate the superiority of our proposed method.

scholarly journals G-Tric: generating three-way synthetic datasets with triclustering solutions

2021 ◽  
Vol 22 (1) ◽  
Author(s):  
João Lobo ◽  
Rui Henriques ◽  
Sara C. Madeira
Keyword(s):  
State Of The Art ◽  
Synthetic Data ◽  
Ground Truth ◽  
Real Data ◽  
Three Dimensions ◽  
Additional Advantage ◽  
Urban Dynamics ◽  
Data Generator ◽  
Real World Datasets ◽  
Synthetic Datasets

Abstract Background Three-way data started to gain popularity due to their increasing capacity to describe inherently multivariate and temporal events, such as biological responses, social interactions along time, urban dynamics, or complex geophysical phenomena. Triclustering, subspace clustering of three-way data, enables the discovery of patterns corresponding to data subspaces (triclusters) with values correlated across the three dimensions (observations $$\times$$ × features $$\times$$ × contexts). With increasing number of algorithms being proposed, effectively comparing them with state-of-the-art algorithms is paramount. These comparisons are usually performed using real data, without a known ground-truth, thus limiting the assessments. In this context, we propose a synthetic data generator, G-Tric, allowing the creation of synthetic datasets with configurable properties and the possibility to plant triclusters. The generator is prepared to create datasets resembling real 3-way data from biomedical and social data domains, with the additional advantage of further providing the ground truth (triclustering solution) as output. Results G-Tric can replicate real-world datasets and create new ones that match researchers needs across several properties, including data type (numeric or symbolic), dimensions, and background distribution. Users can tune the patterns and structure that characterize the planted triclusters (subspaces) and how they interact (overlapping). Data quality can also be controlled, by defining the amount of missing, noise or errors. Furthermore, a benchmark of datasets resembling real data is made available, together with the corresponding triclustering solutions (planted triclusters) and generating parameters. Conclusions Triclustering evaluation using G-Tric provides the possibility to combine both intrinsic and extrinsic metrics to compare solutions that produce more reliable analyses. A set of predefined datasets, mimicking widely used three-way data and exploring crucial properties was generated and made available, highlighting G-Tric’s potential to advance triclustering state-of-the-art by easing the process of evaluating the quality of new triclustering approaches.

scholarly journals Multiple Noisy Label Distribution Propagation for Crowdsourcing

2019 ◽  
Author(s):  
Hao Zhang ◽  
Liangxiao Jiang ◽  
Wenqiang Xu
Keyword(s):  
Supervised Learning ◽  
Real World ◽  
Effective Means ◽  
Ground Truth ◽  
Cost Effective ◽  
Nearest Neighbors ◽  
True Label ◽  
Real World Datasets ◽  
The Individual ◽  
Label Distribution

Crowdsourcing services provide a fast, efficient, and cost-effective means of obtaining large labeled data for supervised learning. Ground truth inference, also called label integration, designs proper aggregation strategies to infer the unknown true label of each instance from the multiple noisy label set provided by ordinary crowd workers. However, to the best of our knowledge, nearly all existing label integration methods focus solely on the multiple noisy label set itself of the individual instance while totally ignoring the intercorrelation among multiple noisy label sets of different instances. To solve this problem, a multiple noisy label distribution propagation (MNLDP) method is proposed in this study. MNLDP first transforms the multiple noisy label set of each instance into its multiple noisy label distribution and then propagates its multiple noisy label distribution to its nearest neighbors. Consequently, each instance absorbs a fraction of the multiple noisy label distributions from its nearest neighbors and yet simultaneously maintains a fraction of its own original multiple noisy label distribution. Promising experimental results on simulated and real-world datasets validate the effectiveness of our proposed method.

scholarly journals Efficient Heterogeneous Collaborative Filtering without Negative Sampling for Recommendation

2020 ◽  
Vol 34 (01) ◽  
pp. 19-26 ◽  
Author(s):  
Chong Chen ◽  
Min Zhang ◽  
Yongfeng Zhang ◽  
Weizhi Ma ◽  
Yiqun Liu ◽  
...  
Keyword(s):  
Collaborative Filtering ◽  
Real World ◽  
Large Scale ◽  
State Of The Art ◽  
Heterogeneous Data ◽  
Model Parameters ◽  
Online Systems ◽  
Practical Applications ◽  
Real World Datasets ◽  
Primary Type

Recent studies on recommendation have largely focused on exploring state-of-the-art neural networks to improve the expressiveness of models, while typically apply the Negative Sampling (NS) strategy for efficient learning. Despite effectiveness, two important issues have not been well-considered in existing methods: 1) NS suffers from dramatic fluctuation, making sampling-based methods difficult to achieve the optimal ranking performance in practical applications; 2) although heterogeneous feedback (e.g., view, click, and purchase) is widespread in many online systems, most existing methods leverage only one primary type of user feedback such as purchase. In this work, we propose a novel non-sampling transfer learning solution, named Efficient Heterogeneous Collaborative Filtering (EHCF) for Top-N recommendation. It can not only model fine-grained user-item relations, but also efficiently learn model parameters from the whole heterogeneous data (including all unlabeled data) with a rather low time complexity. Extensive experiments on three real-world datasets show that EHCF significantly outperforms state-of-the-art recommendation methods in both traditional (single-behavior) and heterogeneous scenarios. Moreover, EHCF shows significant improvements in training efficiency, making it more applicable to real-world large-scale systems. Our implementation has been released 1 to facilitate further developments on efficient whole-data based neural methods.

scholarly journals Partial Label Learning by Semantic Difference Maximization

2019 ◽  
Author(s):  
Lei Feng ◽  
Bo An
Keyword(s):  
State Of The Art ◽  
Ground Truth ◽  
Positive Answer ◽  
Learning Framework ◽  
Novel Approach ◽  
Semantic Difference ◽  
Weakly Supervised ◽  
Partial Label Learning ◽  
The Given ◽  
First Time

Partial label learning is a weakly supervised learning framework, in which each instance is provided with multiple candidate labels while only one of them is correct. Most of the existing approaches focus on leveraging the instance relationships to disambiguate the given noisy label space, while it is still unclear whether we can exploit potentially useful information in label space to alleviate the label ambiguities. This paper gives a positive answer to this question for the first time. Specifically, if two instances do not share any common candidate labels, they cannot have the same ground-truth label. By exploiting such dissimilarity relationships from label space, we propose a novel approach that aims to maximize the latent semantic differences of the two instances whose ground-truth labels are definitely different, while training the desired model simultaneously, thereby continually enlarging the gap of label confidences between two instances of different classes. Extensive experiments on artificial and real-world partial label datasets show that our approach significantly outperforms state-of-the-art counterparts.

scholarly journals Discrete Trust-aware Matrix Factorization for Fast Recommendation

2019 ◽  
Author(s):  
Guibing Guo ◽  
Enneng Yang ◽  
Li Shen ◽  
Xiaochun Yang ◽  
Xiaodong He
Keyword(s):  
Social Influence ◽  
Collaborative Filtering ◽  
Recommender Systems ◽  
Social Relations ◽  
Real World ◽  
Matrix Factorization ◽  
State Of The Art ◽  
Proposed Model ◽  
Hamming Space ◽  
Real World Datasets

Trust-aware recommender systems have received much attention recently for their abilities to capture the influence among connected users. However, they suffer from the efficiency issue due to large amount of data and time-consuming real-valued operations. Although existing discrete collaborative filtering may alleviate this issue to some extent, it is unable to accommodate social influence. In this paper we propose a discrete trust-aware matrix factorization (DTMF) model to take dual advantages of both social relations and discrete technique for fast recommendation. Specifically, we map the latent representation of users and items into a joint hamming space by recovering the rating and trust interactions between users and items. We adopt a sophisticated discrete coordinate descent (DCD) approach to optimize our proposed model. In addition, experiments on two real-world datasets demonstrate the superiority of our approach against other state-of-the-art approaches in terms of ranking accuracy and efficiency.

scholarly journals EA Reader: Enhance Attentive Reader for Cloze-Style Question Answering via Multi-Space Context Fusion

2019 ◽  
Vol 33 ◽  
pp. 6375-6382
Author(s):  
Chengzhen Fu ◽  
Yan Zhang
Keyword(s):  
Real World ◽  
Question Answering ◽  
State Of The Art ◽  
Unified Model ◽  
Inference Process ◽  
Context Vector ◽  
Attentive Reader ◽  
Semantic Spaces ◽  
Real World Datasets

Query-document semantic interactions are essential for the success of many cloze-style question answering models. Recently, researchers have proposed several attention-based methods to predict the answer by focusing on appropriate subparts of the context document. In this paper, we design a novel module to produce the query-aware context vector, named Multi-Space based Context Fusion (MSCF), with the following considerations: (1) interactions are applied across multiple latent semantic spaces; (2) attention is measured at bit level, not at token level. Moreover, we extend MSCF to the multi-hop architecture. This unified model is called Enhanced Attentive Reader (EA Reader). During the iterative inference process, the reader is equipped with a novel memory update rule and maintains the understanding of documents through read, update and write operations. We conduct extensive experiments on four real-world datasets. Our results demonstrate that EA Reader outperforms state-of-the-art models.

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