scholarly journals Studi Teoritis Senyawa Turunan Kalkon Hidroksi Sebagai Sensor Kimia Berbagai Anion

2019 ◽  
Vol 3 (2) ◽  
pp. 95
Author(s):  
Fitra Perdana ◽  
Karna Wijaya ◽  
Ria Armunanto
Keyword(s):  
Hydrogen Bond ◽  
Geometry Optimization ◽  
Dft Method ◽  
Molecular Structures ◽  
Energy Change ◽  
Lumo Energy ◽  
Interaction Models ◽  
Chalcone Derivatives ◽  
The Difference ◽  
Homo Lumo

AbstrakStudi secara teoritis telah dilakukan untuk mempelajari interaksi senyawa turunan kalkon hidroksi (CH) sebagai sensor kimia dengan anion F-, Cl-, Br-, CN-, CH3COO-, dan NO3-. Penelitian ini bertujuan untuk memodelkan struktur molekul senyawa turunan kalkon hidroksi (CH) dan sifat sensornya serta model interaksinya dengan anion dengan metode DFT. Hasil optimasi geometri menunjukkan terjadinya pemanjangan ikatan O-H sebesar 0,63-0,85 Å dengan adanya anion F-, CN-, and CH3COO-. Hal ini mengindikasikan terjadinya deprotonasi sensor kalkon hidroksi (CH) oleh anion. Sedangkan interaksi sensor kalkon hidroksi (CH) dengan anion Cl-, Br-, dan NO3- hanya berupa ikatan hidrogen dengan pemanjangan ikatan O-H sebesar 0,08-0,46 Å. Sensor kalkon hidroksi (CH) yang mengalami deprotonasi memiliki energi interaksi yang lebih besar yaitu -209,37 – -424,06 kJ/mol dibandingkan sensor yang hanya membentuk ikatan hidrogen yaitu -98,60 – -125,59 kJ/mol. Sensor yang mengalami deprotonasi mengakibatkan turunnya selisih energi HOMO-LUMO dari -3,94 – -4,06 eV menjadi -2,62 – -2,75 eV.Kata kunci: sensor kimia, kalkon hidroksi, anion, DFT  AbstractTheoretical study had been carried out to investigate interaction between hydroxy chalcone derivatives (CH) as chemosensors with F-, Cl-, Br-, CN-, CH3COO-, and NO3- anions. This study was aimed to design molecular structures of chemosensor hydroxy chalcone (CH) properties for the anions and their interaction models with DFT method. The result of geometry optimization showed 0,63-0,85 Å O-H bond elongation of the hydroxy chalcone was occured by F-, CN-, and CH3COO-. It was indicated deprotonation of sensor hydroxy chalcone (CH) by anions. Where as the interaction of the hydroxy chalcone (CH) with Cl-, Br-, and NO3- just formed an hydrogen bond with 0,08-0,46 Å O-H bond elongation. Deprotonized sensor hydroxy chalcone (CH) had more energy change of interaction -209,37– -424,06 kJ/mol than sensor which just formed the hydrogen bond -98,60 – -125,59 kJ/mol. Deprotonized sensor caused reduction of the difference of HOMO-LUMO energy from - 3,94 – -4,06 eV to -2,62 – -2,75 eV.Keywords: chemosensor, hydroxy chalcone, anion, DFT

scholarly journals Electronic Structure of Two New Bis-Schiff Base Ligands using DFT Method

2021 ◽  
pp. 10-15
Author(s):  
Elham Abdalrahem Bin Selim ◽  
Mohammed Hadi Al–Douh ◽  
Hassan Hadi Abdullah ◽  
Dahab Salim Al–Nohey
Keyword(s):  
Experimental Data ◽  
Biological Activity ◽  
Metal Ion ◽  
Energy Levels ◽  
Dft Method ◽  
Ftir Spectra ◽  
Schiff Base Ligands ◽  
Lumo Energy ◽  
Homo Lumo ◽  
Good Agreement

Two bis-Schiff Bases 1 and 2 are ligands that can coordinate with manganese metal to form stable complexes and have biological activity. Thermodynamic parameters, HOMO-LUMO energy levels and FTIR spectra of two ligands have been computed using B3LYP/6-311++G(d,p) functional of the DFT calculations. Both ligands are favored thermodynamically, and the ligand 1 has been shown to be more stable than ligand 2. The Polarizability values of two ligands have been investigated. The results refer that ligand 2 interacts earlier than ligand 1 to the metal ion. The FTIR spectra of two ligands have been evaluated. All results show the good agreement between the theoretical and experimental data.

scholarly journals Computational and Spectral Discussion of Some Substituted Chalcone Derivatives

2021 ◽  
Vol 12 (6) ◽  
pp. 7159-7176
Keyword(s):  
Geometry Optimization ◽  
Spectroscopic Characterization ◽  
Diffusion Method ◽  
Geometrical Parameters ◽  
1H And 13C Nmr ◽  
Chalcone Derivatives ◽  
Ft Ir ◽  
Experimental Values ◽  
Antibacterial And Antifungal ◽  
Homo Lumo

The substituted chalcone derivatives 1–7 have been synthesized, and spectroscopic characterization were done as done using the experimental FT-IR, UV-Vis, GC-MS, 1D NMR spectroscopy. The favored conformation of substituted chalcone 3 was predicted theoretically by geometry optimization structure selected geometrical parameters and molecular properties such as NBO, AIM, HOMO-LUMO, MEP surface, and atomic charges were derived from optimized structures. The 1H and 13C NMR spectral data had been additionally computed using the Gaussian-09 package and compared with the experimental values. The antibacterial and antifungal activity was derived by the disc diffusion method.

scholarly journals New naphtho[1,8-ef]perimidines: synthesis, fluorescence studies and application for detection of nitroanalytes

2021 ◽  
Vol 8 (4) ◽  
pp. 20218416
Author(s):  
Igor L. Nikonov ◽  
Leila K. Sadieva ◽  
Мaria I. Savchuk ◽  
Еkaterina S. Starnovskaya ◽  
Dmitry S. Kopchuk ◽  
...  
Keyword(s):  
Visual Detection ◽  
Photophysical Properties ◽  
Dft Method ◽  
Rational Approach ◽  
Green Fluorescence ◽  
Lumo Energy ◽  
Fluorescence Studies ◽  
Snh Methodology ◽  
New Compounds ◽  
Homo Lumo

A rational approach to the synthesis of substituted naphtho[1,8-ef]perimidines based on SNH methodology and cyclization  reaction in the series of condensed azines with naphthalene substituents was presented. Photophysical properties of the obtained fluorophores were studied, in particular, green fluorescence in the 485–536 nm range with quantum yield up to 32.4% was detected. HOMO-LUMO energy values and distributions for the new compounds were calculated by the DFT method in comparison with nitroanalytes and perylene. Based on the data obtained, as well as on the results of fluorescence titration, the possibility of using the new diazaperylenes as potential chemosensors for the visual detection of nitro-containing explosives was shown.

scholarly journals Crystal structure and optical properties of fused-ring chalcone (E)-3-(anthracen-9-yl)-1-(4-nitrophenyl)prop-2-en-1-one

2019 ◽  
Vol 75 (5) ◽  
pp. 685-689 ◽  
Author(s):  
Muhamad Fikri Zaini ◽  
Ibrahim Abdul Razak ◽  
Wan Mohd Khairul ◽  
Suhana Arshad
Keyword(s):  
Close Agreement ◽  
Energy Gap ◽  
Dft Method ◽  
Ring System ◽  
Hirshfeld Surface ◽  
Lumo Energy ◽  
Compound C ◽  
Two Component ◽  
Fused Ring ◽  
Homo Lumo

The title compound, C23H15NO3, adopts an s-cis conformation with respect to the ethylene C=C and carbonyl C=O double bonds in the enone unit. The molecule is significantly twisted with a dihedral angle of 48.63 (14)° between the anthracene ring system and the benzene ring. In the crystal, molecules are linked into inversion dimers with an R 2 2(10) graph-set motif via pairs of C—H...O hydrogen bonds. The intermolecular interactions were analysed and quantified by Hirshfeld surface analysis. The molecular structure was optimized and a small HOMO–LUMO energy gap of 2.55 eV was obtained using the DFT method at the B3LYP/6–311 G++(d,p) level of theory. This value is in close agreement with the experimental value of 2.52 eV obtained from the UV–vis analysis. The crystal used was a two-component merohedral twin with a refined ratio of 0.1996 (16):0.8004 (16).

scholarly journals First Principles Study on the Stability and Electronic Structures of 7,8-Dichloro-4-Oxo-4H-Chromene-3-Carbaldehyde

2016 ◽  
Vol 855 ◽  
pp. 31-36
Author(s):  
Pek Lan Toh ◽  
Montha Meepripruk ◽  
Lee Sin Ang ◽  
Shukri Sulaiman ◽  
Mohamed Ismail Mohamed-Ibrahim
Keyword(s):  
Electronic Structures ◽  
Density Functional ◽  
Molecular System ◽  
Population Analysis ◽  
Measurement Data ◽  
Geometry Optimization ◽  
Molecular Structures ◽  
Basis Sets ◽  
Mulliken Population ◽  
Homo Lumo

The molecular structures and electronic properties of 7,8-Dichloro-4-Oxo-4H-Chromene-3-Carbaldehyde, C10H4Cl2O3 have been studied using Density Functional Theory (DFT) method. The calculation of geometry optimization was conducted to find the local energy minimum of C10H4Cl2O3 molecular system. The equilibrium geometries were used to determine the HOMO-LUMO gaps, Mulliken atomic charges, and other electronic structures of C10H4Cl2O3. The significant findings from DFT/B3LYP functional within the basis sets of 6-31G**, 6-31++G**, 6-311G**, and 6-311++G** show that the optimized geometries of C10H4Cl2O3 are in good agreement with that of measurement data. To further investigate this, using a variety of basis sets (3-21G, 6-31G, 6-31++G, 6-31G**, 6-31++G**, 6-311G, 6-311++G, 6-311G**, and 6-311++G**), it is found that the calculated total energy values of C10H4Cl2O3 are close to each other. Similarly, the computed HOMO-LUMO energy gaps obtained are also close to each other. Using the scheme of Mulliken Population Analysis (MPA), the trend of findings are the same for both cases of B3LYP/6-31G and B3LYP/6-31G** level of calculations. For the method of B3LYP/6-31G, it is clearly found that C4 and C6 have the highest positively charge, with the corresponding values about +0.284 and +0.238, respectively. On the other hand, the charge values of +0.157 and +0.206 are found on Cl1 and Cl2 atoms. The atoms of O1, O2, and O3 have the negatively charges, with the values of about 0.398, -0.512, and -0.424, respectively. Similarly, in the case of DFT/B3LYP/6-31G** level of theory, the computed charge values of C2 and C4 are about +0.311 and +0.393, respectively. Furthermore, the Cl1 and Cl2 atoms have the positively charge values of about +0.043 and +0.070, whereas for the O1, O2, and O3 atoms, the charges values obtained are about -0.421, -0.467, and -0.498, respectively.

scholarly journals Spectroscopic Evaluation of Chalcone Derivatives and their Zinc Metal Complexes: A Combined Experimental and Computational Approach on the Binding of the Complexes with the Serum Albumin

2020 ◽  
Author(s):  
Manos C. Vlasiou
Keyword(s):  
Molecular Docking ◽  
Serum Albumin ◽  
Electrostatic Interactions ◽  
Condensation Reaction ◽  
Dft Method ◽  
Spectroscopic Properties ◽  
Molecular Structures ◽  
Chalcone Derivatives ◽  
Vis Spectroscopy ◽  
Spectroscopy Studies

Abstract Three chalcone derivatives (L1, L2, L3) were synthesized using Claisen-Schmidt condensation reaction. Their molecular structures and spectroscopic properties (IR, UV-vis, 1HNMR), were calculated at B3LYP level. Electrostatic interactions and HOMO-LUMO properties were calculated using TD-DFT method. Molecular docking was used to compare the HSA (human serum albumin) interactions with the ligands and their Zn complexes (C1, C2, C3) which were synthesized by interaction between the ligands and the Zn (II) ion in a 2:1 M ratio. Elemental analysis, FT-IR, and UV–Vis spectroscopy studies investigated the structure of the synthesized complexes. UV–Vis, molecular docking and molecular dynamics were used to study the interactions of the Zn complexes with the BSA (bovine serum albumin). The biological activity of the Zn-Chalcone complexes was generally higher than the chalcones when evaluated spectroscopically and theoretically.

scholarly journals A DFT study of the effects of Sc doping on electronic and optical properties of CdS nanoparticles

2015 ◽  
Vol 33 (4) ◽  
pp. 782-791
Author(s):  
Shafiq Ur Rehman ◽  
Abdul Majid ◽  
Najmal Hassan ◽  
Abdul Shakoor ◽  
G. Murtaza ◽  
...  
Keyword(s):  
Optical Properties ◽  
Density Functional ◽  
Geometry Optimization ◽  
Blue Shift ◽  
Dft Method ◽  
Integration Scheme ◽  
Cds Nanoparticles ◽  
Electronic And Optical Properties ◽  
Numerical Integration Scheme ◽  
Homo Lumo

AbstractIn the present work a systematic study was carried out to understand the influence of Sc doping on electronic and optical properties of CdS nanoparticles. The geometry optimization and symmetry computation for CdS and Sc doped CdS nanoparticles using Density Functional Theory (DFT) on B3LYP level with the QZ4P for Cd and DZ2P for sulphur and Sc were performed by Amsterdam Density Functional (ADF). The results show that HOMO-LUMO gap as well as electronic and optical properties of CdS clusters vary with Sc doping. The HOMO-LUMO gap is affected by the dopant and its value decreases to 0.6 eV. Through considering the numerical integration scheme in the ADF package, we investigated different vibrational modes and our calculated Raman and IR spectra are consistent with the reported result. The calculated IR and Raman peaks of CdS and Sc doped CdS clusters were in the range of 100 to 289 cm−1, 60 cm−1 to 350 cm−1 and 99 cm−1 to 282 cm−1, 60 cm−1 to 350 cm−1, respectively, which was also confirmed by experiment as well as a blue shift occurrence. Subsequently, for deeper research of pure and doped CdS clusters, their absorption spectra were calculated using time-dependent DFT method.

scholarly journals Molecular structure, DFT studies and Hirshfeld analysis of anthracenyl chalcone derivatives

2018 ◽  
Vol 74 (6) ◽  
pp. 780-785 ◽  
Author(s):  
Dian Alwani Zainuri ◽  
Ibrahim Abdul Razak ◽  
Suhana Arshad
Keyword(s):  
Crystal Structure ◽  
Electrostatic Potential ◽  
Density Functional ◽  
Molecular Structures ◽  
Functional Theory ◽  
Chalcone Derivatives ◽  
Hirshfeld Analysis ◽  
Intermolecular Contacts ◽  
Fused Ring System ◽  
Homo Lumo

The molecular and crystal structure of two new chalcone derivatives, (E)-1-(anthracen-9-yl)-3-[4-(piperidin-1-yl)phenyl]prop-2-en-1-one, C28H25NO, (I), and (E)-1-(anthracen-9-yl)-3-[4-(diphenylamino)phenyl]prop-2-en-1-one, C35H25NO, (II), with the fused-ring system at the same position are described. In the crystals of (I) and (II), the molecules are linked via C—H...O hydrogen bonds into inversion dimers, forming R 2 2(22) and R 2 2(14) ring motifs, respectively. Weak intermolecular C—H...π interactions further help to stabilize the crystal structure, forming a two-dimensional architecture. The molecular structures are optimized using density functional theory (DFT) at B3LYP/6–311 G++(d,p) level and compared with the experimental results. The smallest HOMO–LUMO energy gaps of (I) (exp . 2.76 eV and DFT 3.40 eV) and (II) (exp . 2.70 eV and DFT 3.28 eV) indicates the suitability of these crystals in optoelectronic applications. All intermolecular contacts and weaker contributions involved in the supramolecular stabilization are investigated using Hirshfeld surface analysis. The molecular electrostatic potential (MEP) further identifies the positive, negative and neutral electrostatic potential regions of the molecules.

Indenofluorene congeners: Biradicaloids and beyond

2014 ◽  
Vol 86 (4) ◽  
pp. 517-528 ◽  
Author(s):  
Akihiro Shimizu ◽  
Shunpei Nobusue ◽  
Hirokazu Miyoshi ◽  
Yoshito Tobe
Keyword(s):  
Physical Properties ◽  
Ground State ◽  
Three Dimensional ◽  
Molecular Structures ◽  
Triplet Energy ◽  
Lumo Energy ◽  
Energy Gaps ◽  
Electronic Configurations ◽  
Homo Lumo

Abstract Singlet biradicaloids are certainly one of the most frequently discussed topics at ISNA-15. In this review our own work on the synthesis, molecular structures, and physical properties relevant to biradical character of indenofluorene isomers are described. These include indeno[2,1-a]fluorene with an o-quinodimethane substructure, benz[c]indeno[2,1-a]fluorene which is the first 2,3-naphthoquinodimethane derivative isolated, and indeno[2,1-b]fluorene with an m-quinodimethane (m-xylylene) subunit. The observed physical properties are explained in terms of the theoretically derived biradical factors (y), HOMO-LUMO energy gaps, and singlet-triplet energy gaps in the ground state electronic configurations. In addition, we discuss here two perspectives in the biradicaloid chemistry, (i) two- and three-dimensional indenofluorene congeners arranged in a macrocyclic form and (ii) macrocyclic indenofluorenes having multiple radical characters.

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