scholarly journals Microbial colonisation, the missing link: from airborne dispersal to integration within the soil community.

Author(s):  
Lucie Malard ◽  
David A Pearce

Abstract BackgroundGlobal dispersal of microorganisms primarily occurs through airborne transport. Airborne microorganisms can travel thousands of kilometres and be deposited in the most remote places on Earth, from the Arctic to Antarctica, with the potential of invasion and colonisation. The first stage of microbial colonisation is deposition into a new ecosystem. However, how and under what circumstances such deposited microorganisms might successfully colonise a new environment is yet to be determined. Using the Arctic snowpack as a model system, we investigated the colonisation potential of snow derived bacteria deposited onto Arctic soils during and after snowmelt using laboratory-based microcosm experiments set-up to mimic realistic environmental conditions. We tested different melting rate scenarios to evaluate the influence of increased precipitation (via the increase of bacterial inputs and ecosystem disturbance) as well as the influence of soil pH (as the key driver of soil diversity) on bacterial communities and on the colonisation potential.Results We observed several candidate colonisations in all experiments; however, the number of potentially successful colonisation was higher in acidoneutral soils, at the average snowmelt rate measured in the Arctic. While the higher melt rate increased the total number of potentially invading bacteria, it did not promote colonisation. Instead, persistence decreased with time and most potential colonists were not identified by the end of the experiments. On the other hand, soil pH appeared as a determinant factor impacting invasion and subsequent colonisation. In acidic and alkaline soils, bacterial persistence with time was lower than in acidoneutral soils, as was the number of potentially successful colonisations. ConclusionsThis is the first study to investigate bacterial colonisation using the snowpack as a model system, and to demonstrate the low rate of potentially successful colonisations of soil by invading bacteria. It suggests that local soil properties might have a greater influence on the colonisation outcome than increased precipitation or ecosystem disturbance.

2022 ◽  
Author(s):  
Dmitry Valerievich Moskovchenko ◽  
Evgeny Babkin ◽  
Maria Pogojeva ◽  
Ruslan Zhostkov ◽  
Aleksandr Ovsyuchenko ◽  
...  

Abstract The composition of soils and their parent materials were studied within one of the most northern land areas of the world – the island of Alexandra Land of the Franz Josef Land archipelago. Contents of 65 trace and major elements were determined using atomic emission spectrometry (ICP-AES) и inductively coupled plasma spectrometry (ICP-MS). Other analyzed characteristics included soil pH, particle-size distribution and contents of carbon and nitrogen. The mineralogical composition of rocks was determined in thin sections. The studied soils were formed on basalts with high contents of MgO, Fe2O3, TiO2, Сu, Co, V, Ni, Cr, Zn, and low contents of Pb and Hg. The composition of soils was generally similar to that of the bedrock. The median concentrations (mg kg-1) of trace elements in the soils were as follows: Cu - 160, Zn - 101, Ni - 74, Pb - 2.9, Cd - 0.14, and Hg - 0.031. The bedrock had an alkaline pH, whereas the soil pH ranged from weakly acid to alkaline. The textural class of the soils predominantly corresponded to sandy loam. The contents of clay and silt increased with depth due to the migration of these fractions with groundwater. The concentrations of ecologically hazardous Hg and Pb were slightly increased in the upper layer of soils and correlated with carbon contents, which was indicative of bioconcentration processes.


2021 ◽  
Vol 97 (4) ◽  
Author(s):  
Lucas Dantas Lopes ◽  
Jingjie Hao ◽  
Daniel P Schachtman

ABSTRACT Soil pH is a major factor shaping bulk soil microbial communities. However, it is unclear whether the belowground microbial habitats shaped by plants (e.g. rhizosphere and root endosphere) are also affected by soil pH. We investigated this question by comparing the microbial communities associated with plants growing in neutral and strongly alkaline soils in the Sandhills, which is the largest sand dune complex in the northern hemisphere. Bulk soil, rhizosphere and root endosphere DNA were extracted from multiple plant species and analyzed using 16S rRNA amplicon sequencing. Results showed that rhizosphere, root endosphere and bulk soil microbiomes were different in the contrasting soil pH ranges. The strongest impact of plant species on the belowground microbiomes was in alkaline soils, suggesting a greater selective effect under alkali stress. Evaluation of soil chemical components showed that in addition to soil pH, cation exchange capacity also had a strong impact on shaping bulk soil microbial communities. This study extends our knowledge regarding the importance of pH to microbial ecology showing that root endosphere and rhizosphere microbial communities were also influenced by this soil component, and highlights the important role that plants play particularly in shaping the belowground microbiomes in alkaline soils.


2016 ◽  
Vol 2 (4) ◽  
pp. 165-182 ◽  
Author(s):  
Chelsea L. Petrenko ◽  
Julia Bradley-Cook ◽  
Emily M. Lacroix ◽  
Andrew J. Friedland ◽  
Ross A. Virginia

Shrub species are expanding across the Arctic in response to climate change and biotic interactions. Changes in belowground carbon (C) and nitrogen (N) storage are of global importance because Arctic soils store approximately half of global soil C. We collected 10 (60 cm) soil cores each from graminoid- and shrub-dominated soils in western Greenland and determined soil texture, pH, C and N pools, and C:N ratios by depth for the mineral soil. To investigate the relative chemical stability of soil C between vegetation types, we employed a novel sequential extraction method for measuring organo-mineral C pools of increasing bond strength. We found that (i) mineral soil C and N storage was significantly greater under graminoids than shrubs (29.0 ± 1.8 versus 22.5 ± 3.0 kg·C·m−2 and 1.9 ± .12 versus 1.4 ± 1.9 kg·N·m−2), (ii) chemical mechanisms of C storage in the organo-mineral soil fraction did not differ between graminoid and shrub soils, and (iii) weak adsorption to mineral surfaces accounted for 40%–60% of C storage in organo-mineral fractions — a pool that is relatively sensitive to environmental disturbance. Differences in these C pools suggest that rates of C accumulation and retention differ by vegetation type, which could have implications for predicting future soil C pool storage.


2017 ◽  
Vol 130 (4) ◽  
pp. 332 ◽  
Author(s):  
Thomas S Jung ◽  
Jay Frandsen ◽  
Danny C Gordon ◽  
David H Mossop

A consequence of rapid global warming has been the shrubification (increase in shrub abundance, cover, and biomass) of arctic and alpine tundra ecosystems. Shrubification is likely a key driver of predicted and observed changes in the biodiversity of the Arctic. The American Beaver (Castor canadensis) has a vast distributional range, covering most of north America below the tree line; however, it has not been recorded in tundra habitat of the Beaufort Coastal Plain of Yukon and Alaska. in 2015, we observed a beaver dam, lodge, and winter food cache on the Babbage River in Ivvavik National Park, Yukon, Canada. Local Inuvialuit hunters first observed beavers on two rivers immediately east of the Babbage River in 2008 and 2009. Together, these are the first observations of beavers on the Beaufort Coastal Plain and indicate initial attempts at colonization. Colonization of the Beaufort Coastal Plain by beavers may have been facilitated by shrubification of river valleys on the tundra of northern Yukon and adjacent Alaska, which is a consequence of rapid climate warming in the western Arctic.


1961 ◽  
Vol 3 (30) ◽  
pp. 1133-1151 ◽  
Author(s):  
R. Haefeli

AbstractStarting from Glen’s flow law for ice and from a series of assumptions based in part on observations in Greenland and in the Jungfraujoch, the velocity distribution (horizontal velocity component) and surface configuration is derived for a strip-shaped ice sheet in a stationary state. For the choice n = 3 − 4 of the exponent in the power-law flow relation, there is extensive agreement between the theoretically calculated surface profile and the east-west profile measured through “Station Centrale” by Expéditions Polaires Françaises. The corresponding theoretical solution for a circular ice sheet is also given. As a first application of this theory, an attempt is made to calculate the average rate of accumulation in Antarctica from its surface profile (assumed circular in plan) and from the flow-law parameters derived from the Greenland Ice Sheet. It is also shown that a change in accumulation has only a small influence on the total ice thickness of an ice sheet. A method of calculating approximately the age of ice in an ice sheet, based on the foregoing theory, is illustrated by applying it to the Greenland Ice Sheet. After comparing the present theory with that of Nye, a general expression for the surface profile of an ice sheet with constant accumulation is set up and discussed by means of comparison with two profiles through Antarctica.


2015 ◽  
Vol 12 (16) ◽  
pp. 13215-13240 ◽  
Author(s):  
W. Luo ◽  
P. N. Nelson ◽  
M.-H. Li ◽  
J. Cai ◽  
Y. Zhang ◽  
...  

Abstract. Soil pH buffering capacity (pHBC) plays a crucial role in predicting acidification rates, yet its large-scale patterns and controls are poorly understood, especially for neutral-alkaline soils. Here, we evaluated the spatial patterns and drivers of pHBC along a 3600 km long transect (1900 km sub-transect with carbonate containing soils and 1700 km sub-transect with non-carbonate containing soils) across northern China. Soil pHBC was greater in the carbonate containing soils than in the non-carbonate containing soils. Acid addition decreased soil pH in the non-carbonate containing soils more markedly than in the carbonate containing soils. Within the carbonate soil sub-transect, soil pHBC was positively correlated with cation exchange capacity (CEC), carbonate content and exchangeable sodium (Na) concentration, but negatively correlated with initial pH and clay content, and not correlated with soil organic carbon (SOC) content. Within the non-carbonate sub-transect, soil pHBC was positively related to initial pH, clay content, CEC and exchangeable Na concentration, but not related to SOC content. Carbonate content was the primary determinant of pHBC in the carbonate containing soils and CEC was the main determinant of buffering capacity in the non-carbonate containing soils. Soil pHBC was positively related to aridity index and carbonate content across the carbonate containing soil sub-transect. Our results indicated that mechanisms controlling pHBC differ among neutral-alkaline soils of northern China, especially between carbonate and non-carbonate containing soils, leading to different rates, risks, and impacts of acidification. This understanding should be incorporated into the acidification risk assessment and landscape management in a changing world.


PeerJ ◽  
2019 ◽  
Vol 7 ◽  
pp. e7949 ◽  
Author(s):  
Chao Yang ◽  
Jingjing Li ◽  
Yingjun Zhang

Background Soil aggregate-size classes, structural units of soil, are the important factors regulating soil organic carbon (SOC) turnover. However, the processes of litter C mineralization and storage in different aggregates-size classes are poorly understood, especially in the highly alkaline soils of north China. Here, we ask how four different aggregate sizes influence rates of C release (Cr) and SOC storage (Cs) in response to three types of plant litter added to an un-grazed natural grassland. Methods Highly alkaline soil samples were separated into four dry aggregate classes of different sizes (2–4, 1–2, 0.25–1, and <0.25 mm). Three types of dry dead plant litter (leaf, stem, and all standing dead aboveground litter) of Leymus chinensis were added to each of the four aggregate class samples. Litter mass loss rate, Cr, and Cs were measured periodically during the 56-day incubation. Results The results showed that the mass loss in 1–2 mm aggregates was significantly greater than that in other size classes of soil aggregates on both day 28 and day 56. Macro-aggregates (1–2 mm) had the highest Cr of all treatments, whereas 0.25–1 mm aggregates had the lowest. In addition, a significant negative relationship was found between Cs/Cr and soil pH. After incubation for 28 and 56 days, the Cs was also highest in the 1–2 mm aggregates, which implied that the macro-aggregates had not only a higher CO2 release capacity, but also a greater litter C storage capacity than the micro-aggregates in the highly alkaline soils of north China.


2021 ◽  
Vol 29 (1) ◽  
pp. 33-39
Author(s):  
Tatiana S. Smirnova ◽  
Elena A. Mazlova ◽  
Olga A. Kulikova ◽  
Ilya M. Ostrovkin ◽  
Adam M. Gonopolsky ◽  
...  

In recent years, significant efforts have been made to accelerate the economic development of the Arctic zone, leading to intense environmental pollution of this region, accompanied by the significant impact of accumulated environmental damage in the region. The solution to these problems is difficult due to the remoteness of these areas and severe climatic conditions. Therefore, it is important to evaluate the potential for restoration of arctic soils. For this purpose, various indicators are used, including biological ones. In the analyzed arctic soil samples, high concentrations of petroleum hydrocarbons (up to 47,000 mg/kg) and chloride-ions (0.10–0.14 wt %) were established. Microbioassay demonstrated a presence of hydrocarbon-oxidizing microorganisms: Penicillium, Azotobacter chroococcum, Bacillus subtilis, Pseudomonas oleovorans. A low enzymatic activity and specific Arctic climate point out a low self-restoration ability of the soil, demonstrated the need for its remediation. The microbioassay with microbial strains identification and soil remediation methods suitable for the Arctic zone were recommended.


2018 ◽  
Vol 15 (6) ◽  
pp. 1879-1894 ◽  
Author(s):  
Petr Kotas ◽  
Hana Šantrůčková ◽  
Josef Elster ◽  
Eva Kaštovská

Abstract. The unique and fragile High Arctic ecosystems are vulnerable to global climate warming. The elucidation of factors driving microbial distribution and activity in arctic soils is essential for a comprehensive understanding of ecosystem functioning and its response to environmental change. The goals of this study were to investigate microbial biomass and activity, microbial community structure (MCS), and their environmental controls in soils along three elevational transects in the coastal mountains of Billefjorden, central Svalbard. Soils from four different altitudes (25, 275, 525 and 765 m above sea level) were analyzed for a suite of characteristics including temperature regimes, organic matter content, base cation availability, moisture, pH, potential respiration, and microbial biomass and community structure using phospholipid fatty acids (PLFAs). We observed significant spatial heterogeneity of edaphic properties among transects, resulting in transect-specific effects of altitude on most soil parameters. We did not observe any clear elevation pattern in microbial biomass, and microbial activity revealed contrasting elevational patterns between transects. We found relatively large horizontal variability in MCS (i.e., between sites of corresponding elevation in different transects), mainly due to differences in the composition of bacterial PLFAs, but also a systematic altitudinal shift in MCS related to different habitat preferences of fungi and bacteria, which resulted in high fungi-to-bacteria ratios at the most elevated sites. The biological soil crusts on these most elevated, unvegetated sites can host microbial assemblages of a size and activity comparable to those of the arctic tundra ecosystem. The key environmental factors determining horizontal and vertical changes in soil microbial properties were soil pH, organic carbon content, soil moisture and Mg2+ availability.


2015 ◽  
Vol 7 (1) ◽  
pp. 188-224
Author(s):  
Nikolas Sellheim

In the Arctic, where there are seals there are seal hunters. And it is the Arctic states which have been hunting seals for generations. But contrary to other marine mammals, no comprehensive Arctic treaty exists which regulates the hunt for seals. Instead, each Arctic state has developed its own legislative framework for seal hunting. This article screens the current seal hunting legislation in the Arctic states and provides an assessment of the different regimes with regard to animal welfare, professionalism of the hunters and environmental considerations. While there are differences in the set-up of the respective legislation this can be explained by different historical geneses and underlying incentives. Historical developments and the purposes of the seal hunts are therefore discussed in light of current legislation. Lastly, this paper suggests that although a comprehensive sealing treaty in the Arctic is not feasible, close regional cooperation is a crucial element in seal management in the Arctic.


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