scholarly journals Biological Features and Molecular Genetic Structure of Habrobracon hebetor Populations

2021 ◽  
Vol 14 (4) ◽  
pp. 1642-1647
Author(s):  
Irina Agasyeva
Keyword(s):  
Molecular Genetic ◽  
Natural Populations ◽  
Codling Moth ◽  
Host Insect ◽  
Habrobracon Hebetor ◽  
Interpopulation Variability ◽  
Geographic Populations ◽  
Limited Gene Flow ◽  
Parasitic Activity ◽  
High Level

One of the promising entomophages capable of controlling the abundance of the codling moth is Habrobracon hebetor Say. Natural populations of the gabrobragon can reduce the number of caterpillars of the corn moth to 22%, the garden moth to 35%, the cotton moth to 45%, and the gamma moth to 30%. This work aims to assess the parasitic activity of the gabrobragon as a regulator of the codling moth abundance in various geographic populations, to select a host insect for its mass breeding in laboratory conditions, and to assess the molecular genetic variability of the structure of H. hebetor populations. The capture of natural populations of the gabrobragon H. hebetor was carried out in apple orchards in Krasnodar Krai and Stavropol Krai of Russia using cassettes in which caterpillars of the codling moth were placed. As a result of the research, the natural starting population of the gabrobragon H. hebetor was captured, and a method for their maintenance and breeding was developed. The most effective host insect is the wax moth (Galleria mellonela L.), which resulted in 195 adults, compared to 98 of the mill moth (Ephestia kuhniella Zell.). The gabrobragon population introduced into the apple tree cenosis continued its reproduction in natural conditions and largely suppressed the number and harmfulness of the codling moth. The RAPD analysis of the Krasnodar and Stavropol populations of Habrobracon hebetor Say revealed a high level of DNA polymorphism and genetic diversity in the studied geographic populations of the gabrobragon. At the same time, intrapopulation variability was 87.1%, while interpopulation variability accounted for 12.9% of the total indicator. The limited gene flow (Nm = 3.298) results in relatively low identity (GI = 0.906) between populations and significant interpopulation variability. This indicates that the analyzed insect samples probably represent different geographic populations of the H. hebetor ectoparasite.

scholarly journals iPBS polymorphism of rare relict and endangered Allium species growing on the territory of Kazakhstan Altai

2020 ◽  
Vol 200 (9) ◽  
pp. 63-73
Author(s):  
Olesya Rayzer ◽  
Oksana Hapilina
Keyword(s):  
Genetic Diversity ◽  
Molecular Genetic ◽  
Natural Populations ◽  
Dna Amplification ◽  
Practical Significance ◽  
Primer Binding Site ◽  
Natural Habitats ◽  
Allium Species ◽  
Different Populations ◽  
High Level

Abstract. The purpose of the study. The estimation of genetic polymorphism of Kazakhstan populations of rare relict and endemic Allium species. The novelty of the research is the use of the modern molecular genetic iPBS (Inter- Primer Binding Site Polymorphism) method of DNA amplification to assess the genetic diversity of different populations of Allium sp., collected in their natural habitats in the Kazakhstan Altai. Methods. Samples of medicinal relict and endangered species A. ledebourianum, A. altaicum, A. microdiction were collected in the places of their natural growth in the territory of the Kazakhstan Altai. DNA was isolated from 3–5 day sterile seedlings using lysis STAB buffer with RNaseA. PBS primers were used to assess the genetic diversity of different populations of Allium spp. The amplification results obtained using different PBS primers were evaluated in the GenAlex 6.5 macro program for Excel. Results. The polymorphism of 16 genotypes of the rare relict and endangered Allium sp. was analyzed using 7 PBS primers. Clearly distinguishable amplicons were obtained, the number of which varied depending on the primer used. The dendrogram, based on UPGMA analysis, grouped the studied genotypes into 2 main clusters, one of which included samples from the A. altaicum population, and the second cluster included samples from the A. ledebourianum population. A. microdiction represented by one sample did not enter any cluster, and formed a basal branch in the dendrogram. The results of the study have revealed a high degree of iPBS polymorphism and genetic diversity in rare relict and endangered Allium sp. Practical significance. The use of the molecular genetic iPBS method allows to identify a high level of polymorphism, which can serve as a basis for the identification of various genotypes of the Allium sp., which will significantly supplement traditional preservation methods of natural populations of this genus.

scholarly journals Habrobracon hebetor Say as an effi cient parasite to control codling moth

2020 ◽  
pp. 52-57
Author(s):  
V. Ya. Ismailov ◽  
I. S. Agasieva ◽  
A. S. Nastasiy
Keyword(s):  
Codling Moth ◽  
Apple Orchard ◽  
Initial Population ◽  
Habrobracon Hebetor ◽  
Tree Protection ◽  
Russian Research Institute ◽  
Effi Ciency ◽  
Parasitic Activity ◽  
Fruit Damage ◽  
Biological Protection

The article presents the estimation of the parasitic activity of Habrobracon hebetor against the codling moth, the initial population of which was captured in the apple orchard of All-Russian Research Institute of Biological Plants Protection. As a result of the research the biological peculiarities of the natural population of ectoparasite were studied, the host insect – the wax moth (Galleria mellonela L.) was selected, the effi ciency of the bioagent against caterpillars of middle and older ages of codling moth was studied, which was 51.7 and 75.6 %, respectively. In the organic apple orchard of the «List» group companies, the production of gabrobracon against codling moth was carried out on Liberty and Florina varieties of autumn maturation at the rate of 1500 individuals/ha. As a result of the experiment, uniform distribution of gabrobracon throughout the orchard was established. The degree of infection of the pest’s caterpillars by ectoparasite was 50-65 % and the fruit damage was 3.8 %. In order to include the bioagent in the system of orchard protection against the codling moth, a number of biological, biorational and chemical insecticides were evaluated in laboratory conditions for compatibility with ectoparasite. The survival rate of the gabrobracon population after Lepidocid, CK treatment was 79.8 %. The baculoviruses preparation FermoVirin YaP, based on granulosis of the codling moth, is absolutely non-toxic for H. hebetor (the imago emergence after treatment was 100 %, which indicates the complete compatibility of the entomophage and the preparation). On the basis of the received data the inclusion H. hebetor bioagent into the system of apple tree protection against the codling moth in conditions of plain part of Krasnodar region is expedient as it allows to increase the effi ciency of the biological protection system of the apple orchard.

scholarly journals Molecular genetic analysis and phenology of the plane lace bug Corythucha ciliata Say (Hemiptera: Tingidae) in different parts of Krasnodar Krai

2020 ◽  
Vol 21 ◽  
pp. 00011
Author(s):  
Ekaterina Besedina ◽  
Vladimir Kil ◽  
Vladimir Ismailov ◽  
Maria Karpunina
Keyword(s):  
Genetic Similarity ◽  
Rapd Analysis ◽  
Molecular Genetic ◽  
Molecular Genetic Analysis ◽  
Krasnodar Krai ◽  
Lace Bug ◽  
Geographic Populations ◽  
Interpopulation Variation ◽  
High Level ◽  
High Degree

The article presents the results of studying the phenology and dynamics of the number of plane lace bug Corythucha ciliata Say. RAPD analysis of geographic populations of plane lace bug from various parts of Krasnodar Krai revealed a high level of DNA polymorphism, genetic diversity, genetic similarity and the absence of significant differences between the samples for these indicators. It shows that the majority of the genetic variation (90.2 %) is intrapopulation, while the interpopulation variation accounts for 9.8 % of the total. A significant drift of genes was revealed between the populations of C. ciliata (Nm = 4.56) and a high degree of genetic similarity between them at the intraspecific level. The analyzed insect samples are concluded to be subpopulations of one plane lace bug population.

scholarly journals Assessment of AFLP-Based Genetic Variation in the Populations of Picea asperata

2005 ◽  
Vol 54 (1-6) ◽  
pp. 24-30 ◽  
Author(s):  
X. Xue ◽  
Y. Wang ◽  
H. Korpelainen ◽  
C. Li
Keyword(s):  
Genetic Diversity ◽  
Population Genetic ◽  
Unbiased Estimate ◽  
Natural Populations ◽  
Genetic Distances ◽  
Western China ◽  
Picea Asperata ◽  
Limited Gene Flow ◽  
The Mean ◽  
High Level

Summary Picea asperata Mast., which occurs in a restricted habitat in western China, has a wide ecological amplitude. In the present study, ten natural populations of P. asperata were studied using AFLP markers to investigate the population genetic structure and the level of genetic diversity. Of the 210 loci identified with two EcoRI/MseI primer combinations, 142 loci were found to be polymorphic. Yet, the level of genetic diversity observed within populations was quite low. The averages of NEI’s gene diversities (h) and Shannon's indices of diversity (I) calculated across populations equaled 0.156 and 0.227, respectively. The coefficient of gene differentiation among populations, based on the estimate GST and the unbiased estimate Φst, equaled 0.340 and 0.231, respectively. The mean genetic distance (D) between population pairs was 0.119 (range 0.050-0.156). Such high values indicate that there is significant differentiation among populations of P. asperata. Several factors could have contributed to the strong population differentiation, including relatively limited gene flow between populations (Nm = 0.968). Variation in environmental conditions and consequent selection pressures may be other factors attributing to the high level of genetic differentiation among populations. In addition, it was discovered that the geographic distances are not correlated with the genetic distances between the populations of P. asperata.

Molecular Characterization and Genetic Diversity Study in F3 Population of Rice

2013 ◽  
Vol 20 (1-2) ◽  
pp. 1-8
Author(s):  
MM Rahman ◽  
L Rahman ◽  
SN Begum ◽  
F Nur
Keyword(s):  
Genetic Distance ◽  
Gene Diversity ◽  
Random Amplified Polymorphic Dna ◽  
Molecular Genetic ◽  
Molecular Genetic Analysis ◽  
Polymorphic Loci ◽  
Rice Genotypes ◽  
High Level ◽  
Genetic Diversity Study ◽  
Diversity Study

Random Amplified Polymorphic DNA (RAPD) assay was initiated for molecular genetic analysis among 13 F3 rice lines and their parents. Four out of 15 decamer random primers were used to amplify genomic DNA and the primers yielded a total of 41 RAPD markers of which 37 were considered as polymorphic with a mean of 9.25 bands per primer. The percentage of polymorphic loci was 90.24. The highest percentage of polymorphic loci (14.63) and gene diversity (0.0714) was observed in 05-6 F3 line and the lowest polymorphic loci (0.00) and gene diversity (0.00) was found in 05-12 and 05-15 F3 lines. So, relatively high level of genetic variation was found in 05-6 F3 line and it was genetically more diverse compared to others. The average co-efficient of gene differentiation (GST) and gene flow (Nm) values across all the loci were 0.8689 and 0.0755, respectively. The UPGMA dendrogram based on the Nei’s genetic distance differentiated the rice genotypes into two main clusters: PNR-519, 05-19, 05-14, 05-12 and 05-17 grouped in cluster 1. On the other hand, Baradhan, 05-9, 05-13, 05-11, 05-5, 05-6, 05-1, 05-4, 05-15 and 05-25 were grouped in cluster 2. The highest genetic distance (0.586) was found between 05-4 and 05-17 F3 lines and they remain in different cluster.DOI: http://dx.doi.org/10.3329/pa.v20i1-2.16839 Progress. Agric. 20(1 & 2): 1 – 8, 2009

scholarly journals POPULATION GENETICS OF ALLOZYME VARIATION IN NEUROSPORA INTERMEDIA

Genetics ◽  
1975 ◽  
Vol 80 (4) ◽  
pp. 785-805
Author(s):  
P T Spieth
Keyword(s):  
Genetic Variation ◽  
Vegetative Reproduction ◽  
Vascular Plant ◽  
Natural Populations ◽  
Allozyme Variation ◽  
Regular Feature ◽  
Local Populations ◽  
Neurospora Intermedia ◽  
Pattern Of Variation ◽  
High Level

ABSTRACT Electrophoretically detectable variation in the fungus Neurospora intermedia has been surveyed among isolates from natural populations in Malaya, Papua, Australia and Florida. The principal result is a pattern of genetic variation within and between populations that is qualitatively no different than the well documented patterns for Drosophila and humans. In particular, there is a high level of genetic variation, the majority of which occurs at the level of local populations. Evidence is presented which argues that N. intermedia has a population structure analogous to that of an annual vascular plant with a high level of vegetative reproduction. Sexual reproduction appears to be a regular feature in the biology of the species. Substantial heterokaryon function seems unlikely in natural populations of N. intermedia. Theoretical considerations concerning the mechanisms underlying the observed pattern of variation most likely should be consistent with haploid selection theory. The implications of this constraint upon the theory are discussed in detail, leading to the presentation of a model based upon the concept of environmental heterogeneity. The essence of the model, which is equally applicable to haploid and diploid situations, is a shifting distribution of multiple adaptive niches among local populations such that a given population has a small net selective pressure in favor of one allele or another, depending upon its particular distribution of niches. Gene flow among neighboring populations with differing net selective pressures is postulated as the principal factor underlying intrapopulational allozyme variation.

Genetic variability in the natural populations of Lasioderma serricorne (F.) (Coleoptera: Anobiidae), detected by RAPD markers and by esterase isozymes

2015 ◽  
Vol 106 (1) ◽  
pp. 47-53 ◽  
Author(s):  
T. Coelho-Bortolo ◽  
C.A. Mangolin ◽  
A.S. Lapenta
Keyword(s):  
Genetic Variability ◽  
Random Amplified Polymorphic Dna ◽  
Natural Populations ◽  
Electrophoretic Analysis ◽  
Effective Control ◽  
Lasioderma Serricorne ◽  
Control Programs ◽  
Dried Fruit ◽  
High Level ◽  
High Degree

AbstractLasioderma serricorne (F.) is a small cosmopolitan beetle regarded as a destructive pest of several stored products such as grains, flour, spices, dried fruit and tobacco. Chemical insecticides are one of the measures used against the pest. However, intensive insecticide use has resulted in the appearance of resistant insect populations. Therefore, for the elaboration of more effective control programs, it is necessary to know the biological aspects of L. serricorne. Among these aspects, the genetic variability knowledge is very important and may help in the development of new control methods. The objective of this study was to evaluate the genetic variability of 11 natural populations of L. serricorne collected respectively in three and four towns in the states of Paraná and São Paulo, Brazil, using 20 primers random amplified polymorphic DNA (RAPD) and polymorphisms of esterases. These primers produced 352 polymorphic bands. Electrophoretic analysis of esterases allowed the identification of four polymorphic loci (Est-2, Est-4, Est-5 and Est-6) and 18 alleles. Results show that populations are genetically differentiated and there is a high level of genetic variability within populations. The high degree of genetic differentiation is not directly correlated to geographical distance. Thus, our data indicate that movement of infested commodities may contribute to the dissemination of L. serricorne, facilitating gene flow.

scholarly journals Evolutionary paths to macrolide resistance in a Neisseria commensal converge on ribosomal genes through short sequence duplications

PLoS ONE ◽  
2022 ◽  
Vol 17 (1) ◽  
pp. e0262370
Author(s):  
Jordan C. Raisman ◽  
Michael A. Fiore ◽  
Lucille Tomin ◽  
Joseph K. O. Adjei ◽  
Virginia X. Aswad ◽  
...  
Keyword(s):  
Tandem Duplication ◽  
Natural Populations ◽  
Growth Defect ◽  
Duplication Events ◽  
Pathogen Populations ◽  
High Level ◽  
Evolutionary Paths ◽  
Azithromycin Resistance ◽  
Short Tandem

Neisseria commensals are an indisputable source of resistance for their pathogenic relatives. However, the evolutionary paths commensal species take to reduced susceptibility in this genus have been relatively underexplored. Here, we leverage in vitro selection as a powerful screen to identify the genetic adaptations that produce azithromycin resistance (≥ 2 μg/mL) in the Neisseria commensal, N. elongata. Across multiple lineages (n = 7/16), we find mutations that reduce susceptibility to azithromycin converge on the locus encoding the 50S ribosomal L34 protein (rpmH) and the intergenic region proximal to the 30S ribosomal S3 protein (rpsC) through short tandem duplication events. Interestingly, one of the laboratory evolved mutations in rpmH is identical (7LKRTYQ12), and two nearly identical, to those recently reported to contribute to high-level azithromycin resistance in N. gonorrhoeae. Transformations into the ancestral N. elongata lineage confirmed the causality of both rpmH and rpsC mutations. Though most lineages inheriting duplications suffered in vitro fitness costs, one variant showed no growth defect, suggesting the possibility that it may be sustained in natural populations. Ultimately, studies like this will be critical for predicting commensal alleles that could rapidly disseminate into pathogen populations via allelic exchange across recombinogenic microbial genera.

Species boundaries in the Rana arfaki group (Anura: Ranidae) and phylogenetic relationships to other New Guinean Rana

Zootaxa ◽  
2010 ◽  
Vol 2496 (1) ◽  
pp. 49 ◽  
Author(s):  
STEPHEN C. DONNELLAN ◽  
KEN P. APLIN ◽  
TERRY BERTOZZI
Keyword(s):  
Genetic Differentiation ◽  
Genetic Relationships ◽  
Molecular Genetic ◽  
Geographic Area ◽  
The North ◽  
Morphological Differences ◽  
Digital Disc ◽  
High Level ◽  
North And South ◽  
Central Cordillera

Allozyme electrophoresis is used to explore molecular genetic relationships within the Rana arfaki group and between this group and selected lineages of New Guinean Rana. Rana jimiensis is confirmed as a species distinct from R. arfaki and its range in Papua New Guinea is extended to the Southern Highlands Province and the north-coastal ranges in Sandaun Province. Rana arfaki and R. jimiensis show a high level of genetic differentiation maintained across a wide geographic area and show consistent morphological differences in head shape, tympanum size, degree of digital disc dilation and extent of sexual dimorphism. The two species occur syntopically on the Papuan Plateau, Southern Highlands Province, and are regionally sympatric in Sandaun Province. The observed level of genetic differentiation is equivalent to that reported previously between regionally sympatric members of the Rana papua group. Populations of R. jimiensis from north and south of the central cordillera show no obvious morphological and only minor genetic differentiation. In contrast, R. arfaki shows considerable geographic variation in both morphology and allozymes and may include two or more regionally distinctive forms.

Low levels of outcrossing in Pinus leucodermis: further evidence in artificial stands

1994 ◽  
Vol 72 (9) ◽  
pp. 1289-1293 ◽  
Author(s):  
M. Morgante ◽  
P. Rossi ◽  
G. G. Vendramin ◽  
G. Boscherini
Keyword(s):  
Natural Populations ◽  
Selective Advantage ◽  
Minimum Variance ◽  
Outcrossing Rates ◽  
Self Fertilization ◽  
Low Levels ◽  
High Level ◽  
Germinating Seeds ◽  
Neighbourhood Structure ◽  
Key Words Mating System

Outcrossing rates were estimated in two artificial stands of Pinus leucodermis, a wind pollinated conifer characterized by a relatively high level of selfing. Multilocus outcrossing rates, estimated by assaying five enzyme loci, were lower than 86% in the two stands, using both dormant and germinating seeds, and not different from those observed in two natural populations located in the same area. The lack of relevant differences between single-locus minimum variance means and the multilocus outcrossing rate estimates observed in both the artificial stands indicates that most of the apparent selfing is probably caused by actual self-fertilization. The presence of a high level of self-fertilization in this species seems confirmed also in artificial stands, where the density is higher and neighbourhood structure should be less pronounced. The high level of self-fertilization found in P. leucodermis, which is probably due to the presence of a reduced number of recessive embryonic lethals as a consequence of genetic drift, could represent a selective advantage for this pioneering and precocius species. Key words: mating system, outcrossing rates, artificial stands, Pinus leucodermis.

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