An Improved Solution to Identify Spatial Invasion on Metapopulation Networks with SI model

Author(s):  
Yinyin Peng ◽  
Bo Hu ◽  
Hui Feng ◽  
Xiang Li ◽  
Cong Li
Keyword(s):  
Forests ◽  
2021 ◽  
Vol 12 (2) ◽  
pp. 209
Author(s):  
Luiza Tymińska-Czabańska ◽  
Jarosław Socha ◽  
Marek Maj ◽  
Dominika Cywicka ◽  
Xo Viet Hoang Duong

Site productivity provides critical information for forest management practices and is a fundamental measure in forestry. It is determined using site index (SI) models, which are developed using two primary groups of methods, namely, phytocentric (plant-based) or geocentric (earth-based). Geocentric methods allow for direct site growth modelling, in which the SI is predicted using multiple environmental indicators. However, changes in non-static site factors—particularly nitrogen deposition and rising CO2 concentration—lead to an increase in site productivity, which may be visible as an age trend in the SI. In this study, we developed a geocentric SI model for oak. For the development of the SI model, we used data from 150 sample plots, representing a wide range of local topographic and site conditions. A generalized additive model was used to model site productivity. We found that the oak SI depended predominantly on physicochemical soil properties—mainly nitrogen, carbon, sand, and clay content. Additionally, the oak SI value was found to be slightly shaped by the topography, especially by altitude above sea level, and topographic position. We also detected a significant relationship between the SI and the age of oak stands, indicating the long-term increasing site productivity for oak, most likely caused by nitrogen deposition and changes in climatic conditions. The developed geocentric site productivity model for oak explained 77.2% of the SI variation.


2017 ◽  
Vol 13 (7) ◽  
pp. 69
Author(s):  
Pasit Leeniva ◽  
Prapatpong Upala

The objectives of this research are to evaluate acoustic environments and to forecast STI values from spatial component variables in the large classrooms of the Thai public university that were specially controlled the same room finishing materials including the floor, walls, and ceiling. Whereas the five spatial component factors included (1) Room Volume (RV), (2) Ceiling Height (CH), (3) the Ratio of Depth to Width (Rdw), (4) Total Room Surface (TS), and (5) Percentage of Absorbing Surface areas (PAS). The research tools were the smartphones that used the applications for acoustical evaluation and speech intelligibility analysis. The Speech Transmission Index (STI), Reverberation Time (RT), and Background Noise Level (BNL) were collected by the calibrated microphone in the nine points distributed across the entire room. And also, the sounds for testing were simulated such as balloon burst, and STIPA signal via a sound generator. The Thailand Speech Intelligibility (T-SI) model was developed by the multiple regression analysis with a statistical at a confidence level of 95%.The results showed that this T-SI model depended on the strongly positive relationship of PAS and the slightly positive relationship of CH, TS while the RV, Rdw were slightly the negative relationship and which predicted STI values. Moreover, the highest affecting variable of T-SI model was CH and the lowest was PAS. However, this research implies that the improving room acoustic quality would be adjusting the sound absorbing surface areas i.e., increase the cloth curtain or appropriate methods.


2020 ◽  
Vol 1 (1) ◽  
pp. 72-77
Author(s):  
Jozef Radi
Keyword(s):  

Vepra “Përtej Harrimit” e Ermira Xhomaqit, mbetet një studim tejet shkencor, një punim që fare mirë mund të kishte qenë një temë e spikatur doktorature. Edhe për këtë fakt, ajo meriton të lexohet, të kuptohet, të përhapet dhe të merret si model për të tjera vepra. Leximi i këtij libri i ngjan aq shumë një udhëtimi drejt së panjohurës… ku një shpirt Kolombi ecën me guxim të çmendur drejt botëve të zhytura në harresë, me mesazhin e madh të dritës... Është me vend të citohen këto vargje të gjetura në dorëshkrimet e Ramit, e që vijnë nga skëterra e birucave të Burrelit. Është me vend të citohen këto vargje të gjetura në dorëshkrimet e Ramit, e që vijnë nga skëterra e birucave të Burrelit. Qysh? Asnjë s’do të mbesë historinë të vajtojë? Të martirëve të copëtuar? Binjakëve, grave të ve, kujtimin t’u rehatojë? Nga xhelatët e mallkuar?


Viruses ◽  
2019 ◽  
Vol 11 (6) ◽  
pp. 556 ◽  
Author(s):  
Amanda L.J. Duffus ◽  
Trenton W.J. Garner ◽  
Richard A. Nichols ◽  
Joshua P. Standridge ◽  
Julia E. Earl

Ranaviruses began emerging in common frogs (Rana temporaria) in the United Kingdom in the late 1980s and early 1990s, causing severe disease and declines in the populations of these animals. Herein, we explored the transmission dynamics of the ranavirus(es) present in common frog populations, in the context of a simple susceptible-infected (SI) model, using parameters derived from the literature. We explored the effects of disease-induced population decline on the dynamics of the ranavirus. We then extended the model to consider the infection dynamics in populations exposed to both ulcerative and hemorrhagic forms of the ranaviral disease. The preliminary investigation indicated the important interactions between the forms. When the ulcerative form was present in a population and the hemorrhagic form was later introduced, the hemorrhagic form of the disease needed to be highly contagious, to persist. We highlighted the areas where further research and experimental evidence is needed and hope that these models would act as a guide for further research into the amphibian disease dynamics.


2020 ◽  
Vol 37 (11) ◽  
pp. 3131-3148 ◽  
Author(s):  
Noor Youssef ◽  
Edward Susko ◽  
Joseph P Bielawski

Abstract Do interactions between residues in a protein (i.e., epistasis) significantly alter evolutionary dynamics? If so, what consequences might they have on inference from traditional codon substitution models which assume site-independence for the sake of computational tractability? To investigate the effects of epistasis on substitution rates, we employed a mechanistic mutation-selection model in conjunction with a fitness framework derived from protein stability. We refer to this as the stability-informed site-dependent (S-SD) model and developed a new stability-informed site-independent (S-SI) model that captures the average effect of stability constraints on individual sites of a protein. Comparison of S-SI and S-SD offers a novel and direct method for investigating the consequences of stability-induced epistasis on protein evolution. We developed S-SI and S-SD models for three natural proteins and showed that they generate sequences consistent with real alignments. Our analyses revealed that epistasis tends to increase substitution rates compared with the rates under site-independent evolution. We then assessed the epistatic sensitivity of individual site and discovered a counterintuitive effect: Highly connected sites were less influenced by epistasis relative to exposed sites. Lastly, we show that, despite the unrealistic assumptions, traditional models perform comparably well in the presence and absence of epistasis and provide reasonable summaries of average selection intensities. We conclude that epistatic models are critical to understanding protein evolutionary dynamics, but epistasis might not be required for reasonable inference of selection pressure when averaging over time and sites.


Complexity ◽  
2020 ◽  
Vol 2020 ◽  
pp. 1-7
Author(s):  
Juan Liang ◽  
Zhirong Zhao ◽  
Can Li

Brucellosis is one of the major infectious diseases in China. In this study, we consider an SI model of animal brucellosis with transport. The basic reproduction number ℛ0 is obtained, and the stable state of the equilibria is analyzed. Numerical simulation shows that different initial values have a great influence on results of the model. In addition, the sensitivity analysis of ℛ0 with respect to different parameters is analyzed. The results reveal that the transport has dual effects. Specifically, transport can lead to increase in the number of infected animals; besides, transport can also reduce the number of infected animals in a certain range. The analysis shows that the number of infected animals can be controlled if animals are transported reasonably.


2010 ◽  
Vol 217 (5) ◽  
pp. 1965-1970 ◽  
Author(s):  
Yi Wang ◽  
Jianzhong Wang ◽  
Li Zhang
Keyword(s):  

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