scholarly journals Measuring Patient Similarity on Multiple Diseases by Joint Learning via a Convolutional Neural Network

Sensors ◽  
2021 ◽  
Vol 22 (1) ◽  
pp. 131
Author(s):  
Sang Ho Oh ◽  
Seunghwa Back ◽  
Jongyoul Park

Patient similarity research is one of the most fundamental tasks in healthcare, helping to make decisions without incurring additional time and costs in clinical practices. Patient similarity can also apply to various medical fields, such as cohort analysis and personalized treatment recommendations. Because of this importance, patient similarity measurement studies are actively being conducted. However, medical data have complex, irregular, and sequential characteristics, making it challenging to measure similarity. Therefore, measuring accurate similarity is a significant problem. Existing similarity measurement studies use supervised learning to calculate the similarity between patients, with similarity measurement studies conducted only on one specific disease. However, it is not realistic to consider only one kind of disease, because other conditions usually accompany it; a study to measure similarity with multiple diseases is needed. This research proposes a convolution neural network-based model that jointly combines feature learning and similarity learning to define similarity in patients with multiple diseases. We used the cohort data from the National Health Insurance Sharing Service of Korea for the experiment. Experimental results verify that the proposed model has outstanding performance when compared to other existing models for measuring multiple-disease patient similarity.

Author(s):  
Huifeng Guo ◽  
Ruiming TANG ◽  
Yunming Ye ◽  
Zhenguo Li ◽  
Xiuqiang He

Learning sophisticated feature interactions behind user behaviors is critical in maximizing CTR for recommender systems. Despite great progress, existing methods seem to have a strong bias towards low- or high-order interactions, or require expertise feature engineering. In this paper, we show that it is possible to derive an end-to-end learning model that emphasizes both low- and high-order feature interactions. The proposed model, DeepFM, combines the power of factorization machines for recommendation and deep learning for feature learning in a new neural network architecture. Compared to the latest Wide & Deep model from Google, DeepFM has a shared input to its "wide" and "deep" parts, with no need of feature engineering besides raw features. Comprehensive experiments are conducted to demonstrate the effectiveness and efficiency of DeepFM over the existing models for CTR prediction, on both benchmark data and commercial data.


Sensors ◽  
2020 ◽  
Vol 20 (15) ◽  
pp. 4157
Author(s):  
Hung-Yu Chang ◽  
Cheng-Yu Yeh ◽  
Chung-Te Lee ◽  
Chun-Cheng Lin

Many works in recent years have been focused on developing a portable and less expensive system for diagnosing patients with obstructive sleep apnea (OSA), instead of using the inconvenient and expensive polysomnography (PSG). This study proposes a sleep apnea detection system based on a one-dimensional (1D) deep convolutional neural network (CNN) model using the single-lead 1D electrocardiogram (ECG) signals. The proposed CNN model consists of 10 identical CNN-based feature extraction layers, a flattened layer, 4 identical classification layers mainly composed of fully connected networks, and a softmax classification layer. Thirty-five released and thirty-five withheld ECG recordings from the MIT PhysioNet Apnea-ECG Database were applied to train the proposed CNN model and validate its accuracy for the detection of the apnea events. The results show that the proposed model achieves 87.9% accuracy, 92.0% specificity, and 81.1% sensitivity for per-minute apnea detection, and 97.1% accuracy, 100% specificity, and 95.7% sensitivity for per-recording classification. The proposed model improves the accuracy of sleep apnea detection in comparison with several feature-engineering-based and feature-learning-based approaches.


2021 ◽  
Vol 11 (6) ◽  
pp. 2838
Author(s):  
Nikitha Johnsirani Venkatesan ◽  
Dong Ryeol Shin ◽  
Choon Sung Nam

In the pharmaceutical field, early detection of lung nodules is indispensable for increasing patient survival. We can enhance the quality of the medical images by intensifying the radiation dose. High radiation dose provokes cancer, which forces experts to use limited radiation. Using abrupt radiation generates noise in CT scans. We propose an optimal Convolutional Neural Network model in which Gaussian noise is removed for better classification and increased training accuracy. Experimental demonstration on the LUNA16 dataset of size 160 GB shows that our proposed method exhibit superior results. Classification accuracy, specificity, sensitivity, Precision, Recall, F1 measurement, and area under the ROC curve (AUC) of the model performance are taken as evaluation metrics. We conducted a performance comparison of our proposed model on numerous platforms, like Apache Spark, GPU, and CPU, to depreciate the training time without compromising the accuracy percentage. Our results show that Apache Spark, integrated with a deep learning framework, is suitable for parallel training computation with high accuracy.


Sensors ◽  
2021 ◽  
Vol 21 (8) ◽  
pp. 2648
Author(s):  
Muhammad Aamir ◽  
Tariq Ali ◽  
Muhammad Irfan ◽  
Ahmad Shaf ◽  
Muhammad Zeeshan Azam ◽  
...  

Natural disasters not only disturb the human ecological system but also destroy the properties and critical infrastructures of human societies and even lead to permanent change in the ecosystem. Disaster can be caused by naturally occurring events such as earthquakes, cyclones, floods, and wildfires. Many deep learning techniques have been applied by various researchers to detect and classify natural disasters to overcome losses in ecosystems, but detection of natural disasters still faces issues due to the complex and imbalanced structures of images. To tackle this problem, we propose a multilayered deep convolutional neural network. The proposed model works in two blocks: Block-I convolutional neural network (B-I CNN), for detection and occurrence of disasters, and Block-II convolutional neural network (B-II CNN), for classification of natural disaster intensity types with different filters and parameters. The model is tested on 4428 natural images and performance is calculated and expressed as different statistical values: sensitivity (SE), 97.54%; specificity (SP), 98.22%; accuracy rate (AR), 99.92%; precision (PRE), 97.79%; and F1-score (F1), 97.97%. The overall accuracy for the whole model is 99.92%, which is competitive and comparable with state-of-the-art algorithms.


Electronics ◽  
2021 ◽  
Vol 10 (8) ◽  
pp. 920
Author(s):  
Liesle Caballero ◽  
Álvaro Perafan ◽  
Martha Rinaldy ◽  
Winston Percybrooks

This paper deals with the problem of determining a useful energy budget for a mobile robot in a given environment without having to carry out experimental measures for every possible exploration task. The proposed solution uses machine learning models trained on a subset of possible exploration tasks but able to make predictions on untested scenarios. Additionally, the proposed model does not use any kinematic or dynamic models of the robot, which are not always available. The method is based on a neural network with hyperparameter optimization to improve performance. Tabu List optimization strategy is used to determine the hyperparameter values (number of layers and number of neurons per layer) that minimize the percentage relative absolute error (%RAE) while maximize the Pearson correlation coefficient (R) between predicted data and actual data measured under a number of experimental conditions. Once the optimized artificial neural network is trained, it can be used to predict the performance of an exploration algorithm on arbitrary variations of a grid map scenario. Based on such prediction, it is possible to know the energy needed for the robot to complete the exploration task. A total of 128 tests were carried out using a robot executing two exploration algorithms in a grid map with the objective of locating a target whose location is not known a priori by the robot. The experimental energy consumption was measured and compared with the prediction of our model. A success rate of 96.093% was obtained, measured as the percentage of tests where the energy budget suggested by the model was enough to actually carry out the task when compared to the actual energy consumed in the test, suggesting that the proposed model could be useful for energy budgeting in actual mobile robot applications.


Agriculture ◽  
2021 ◽  
Vol 11 (7) ◽  
pp. 651
Author(s):  
Shengyi Zhao ◽  
Yun Peng ◽  
Jizhan Liu ◽  
Shuo Wu

Crop disease diagnosis is of great significance to crop yield and agricultural production. Deep learning methods have become the main research direction to solve the diagnosis of crop diseases. This paper proposed a deep convolutional neural network that integrates an attention mechanism, which can better adapt to the diagnosis of a variety of tomato leaf diseases. The network structure mainly includes residual blocks and attention extraction modules. The model can accurately extract complex features of various diseases. Extensive comparative experiment results show that the proposed model achieves the average identification accuracy of 96.81% on the tomato leaf diseases dataset. It proves that the model has significant advantages in terms of network complexity and real-time performance compared with other models. Moreover, through the model comparison experiment on the grape leaf diseases public dataset, the proposed model also achieves better results, and the average identification accuracy of 99.24%. It is certified that add the attention module can more accurately extract the complex features of a variety of diseases and has fewer parameters. The proposed model provides a high-performance solution for crop diagnosis under the real agricultural environment.


2021 ◽  
Vol 3 (4) ◽  
Author(s):  
Jianlei Zhang ◽  
Yukun Zeng ◽  
Binil Starly

AbstractData-driven approaches for machine tool wear diagnosis and prognosis are gaining attention in the past few years. The goal of our study is to advance the adaptability, flexibility, prediction performance, and prediction horizon for online monitoring and prediction. This paper proposes the use of a recent deep learning method, based on Gated Recurrent Neural Network architecture, including Long Short Term Memory (LSTM), which try to captures long-term dependencies than regular Recurrent Neural Network method for modeling sequential data, and also the mechanism to realize the online diagnosis and prognosis and remaining useful life (RUL) prediction with indirect measurement collected during the manufacturing process. Existing models are usually tool-specific and can hardly be generalized to other scenarios such as for different tools or operating environments. Different from current methods, the proposed model requires no prior knowledge about the system and thus can be generalized to different scenarios and machine tools. With inherent memory units, the proposed model can also capture long-term dependencies while learning from sequential data such as those collected by condition monitoring sensors, which means it can be accommodated to machine tools with varying life and increase the prediction performance. To prove the validity of the proposed approach, we conducted multiple experiments on a milling machine cutting tool and applied the model for online diagnosis and RUL prediction. Without loss of generality, we incorporate a system transition function and system observation function into the neural net and trained it with signal data from a minimally intrusive vibration sensor. The experiment results showed that our LSTM-based model achieved the best overall accuracy among other methods, with a minimal Mean Square Error (MSE) for tool wear prediction and RUL prediction respectively.


2021 ◽  
pp. 1-10
Author(s):  
Hye-Jeong Song ◽  
Tak-Sung Heo ◽  
Jong-Dae Kim ◽  
Chan-Young Park ◽  
Yu-Seop Kim

Sentence similarity evaluation is a significant task used in machine translation, classification, and information extraction in the field of natural language processing. When two sentences are given, an accurate judgment should be made whether the meaning of the sentences is equivalent even if the words and contexts of the sentences are different. To this end, existing studies have measured the similarity of sentences by focusing on the analysis of words, morphemes, and letters. To measure sentence similarity, this study uses Sent2Vec, a sentence embedding, as well as morpheme word embedding. Vectors representing words are input to the 1-dimension convolutional neural network (1D-CNN) with various sizes of kernels and bidirectional long short-term memory (Bi-LSTM). Self-attention is applied to the features transformed through Bi-LSTM. Subsequently, vectors undergoing 1D-CNN and self-attention are converted through global max pooling and global average pooling to extract specific values, respectively. The vectors generated through the above process are concatenated to the vector generated through Sent2Vec and are represented as a single vector. The vector is input to softmax layer, and finally, the similarity between the two sentences is determined. The proposed model can improve the accuracy by up to 5.42% point compared with the conventional sentence similarity estimation models.


2014 ◽  
Vol 2014 ◽  
pp. 1-7 ◽  
Author(s):  
Zhehuang Huang ◽  
Yidong Chen

Exon recognition is a fundamental task in bioinformatics to identify the exons of DNA sequence. Currently, exon recognition algorithms based on digital signal processing techniques have been widely used. Unfortunately, these methods require many calculations, resulting in low recognition efficiency. In order to overcome this limitation, a two-stage exon recognition model is proposed and implemented in this paper. There are three main works. Firstly, we use synergetic neural network to rapidly determine initial exon intervals. Secondly, adaptive sliding window is used to accurately discriminate the final exon intervals. Finally, parameter optimization based on artificial fish swarm algorithm is used to determine different species thresholds and corresponding adjustment parameters of adaptive windows. Experimental results show that the proposed model has better performance for exon recognition and provides a practical solution and a promising future for other recognition tasks.


Sensors ◽  
2021 ◽  
Vol 21 (11) ◽  
pp. 3633
Author(s):  
Rytis Augustauskas ◽  
Arūnas Lipnickas ◽  
Tadas Surgailis

Drilling operations are an essential part of furniture from MDF laminated boards required for product assembly. Faults in the process might introduce adverse effects to the furniture. Inspection of the drilling quality can be challenging due to a big variety of board surface textures, dust, or woodchips in the manufacturing process, milling cutouts, and other kinds of defects. Intelligent computer vision methods can be engaged for global contextual analysis with local information attention for automated object detection and segmentation. In this paper, we propose blind and through drilled holes segmentation on textured wooden furniture panel images using the UNet encoder-decoder modifications enhanced with residual connections, atrous spatial pyramid pooling, squeeze and excitation module, and CoordConv layers for better segmentation performance. We show that even a lightweight architecture is capable to perform on a range of complex textures and is able to distinguish the holes drilling operations’ semantical information from the rest of the furniture board and conveyor context. The proposed model configurations yield better results in more complex cases with a not significant or small bump in processing time. Experimental results demonstrate that our best-proposed solution achieves a Dice score of up to 97.89% compared to the baseline U-Net model’s Dice score of 94.50%. Statistical, visual, and computational properties of each convolutional neural network architecture are addressed.


Sign in / Sign up

Export Citation Format

Share Document