scholarly journals Exploring the effects of different male parent crossings on sheep muscles and related regulatory genes using mRNA-Seq

2022 ◽  
Author(s):  
Jinping Shi ◽  
Quanwei Zhang ◽  
Yali Song ◽  
Zhaomin Lei ◽  
Lingjuan Fu ◽  
...  
Keyword(s):  
Reproduction ◽  
2018 ◽  
Author(s):  
Pacharawan Deenarn ◽  
Punsa Tobwor ◽  
Rungnapa Leelatanawit ◽  
Somjai Wongtriphop ◽  
Jutatip Khudet ◽  
...  

The delay in ovarian maturation in farmed black tiger shrimp Penaeus monodon has resulted in the widespread practice of feeding broodstock with the polychaetes Perinereis nuntia and their unilateral eyestalk ablation. Although this practice alters fatty acid content in shrimp ovaries and hepatopancreas, its effects on fatty acid regulatory genes have yet to be systematically examined. Here, microarray analysis was performed on hepatopancreas and ovary cDNA collected from P. monodon at different ovarian maturation stages, revealing that 72 and 58 genes in fatty acid regulatory pathways were differentially expressed in hepatopancreas and ovaries respectively. Quantitative real-time PCR analysis revealed that ovarian maturation was associated with higher expression levels of acetyl-CoA acetyltransferase, acyl-CoA dehydrogenase, acyl-CoA oxidase 3 and long-chain fatty acid transport protein 4 in hepatopancreas, whereas the expression levels of 15 fatty acid regulatory genes were increased in shrimp ovaries. To distinguish the effects of different treatments, transcriptional changes were examined in P. monodon with stage 1 ovaries before polychaete feeding, after one-month of polychaete feeding and after eyestalk ablation. Polychaete feeding resulted in lower expression levels of enoyl-CoA hydratase and acyl-CoA synthetase medium-chain family member 4, while the expression level of phosphatidylinositide phosphatase SAC1 was higher in shrimp hepatopancreas and ovaries. Additionally, eyestalk ablation resulted in a higher expression level of long-chain fatty acid-CoA ligase 4 in both tissues. Together, our findings describe the dynamics of fatty acid regulatory pathways during crustacean ovarian development and provide potential target genes for alternatives to eyestalk ablation in the future.


Genes ◽  
2019 ◽  
Vol 10 (6) ◽  
pp. 408 ◽  
Author(s):  
Jing-Yao Yu ◽  
Zhan-Guo Zhang ◽  
Shi-Yu Huang ◽  
Xue Han ◽  
Xin-Yu Wang ◽  
...  

Soybeans are an important cash crop and are widely used as a source of vegetable protein and edible oil. MicroRNAs (miRNA) are endogenous small RNA that play an important regulatory role in the evolutionarily conserved system of gene expression. In this study, we selected four lines with extreme phenotypes, as well as high or low protein and oil content, from the chromosome segment substitution line (CSSL) constructed from suinong (SN14) and ZYD00006, and planted and sampled at three stages of grain development for small RNA sequencing and expression analysis. The sequencing results revealed the expression pattern of miRNA in the materials, and predicted miRNA-targeted regulatory genes, including 1967 pairs of corresponding relationships between known-miRNA and their target genes, as well as 597 pairs of corresponding relationships between novel-miRNA and their target genes. After screening and annotating genes that were targeted for regulation, five specific genes were identified to be differentially expressed during seed development and subsequently analyzed for their regulatory relationship with miRNAs. The expression pattern of the targeted gene was verified by Real-time Quantitative PCR (RT-qPCR). Our research provides more information about the miRNA regulatory network in soybeans and further identifies useful genes that regulate storage during soy grain development, providing a theoretical basis for the regulation of soybean quality traits.


Pathology ◽  
2019 ◽  
Vol 51 ◽  
pp. S125
Author(s):  
Christine M. Knauth ◽  
Elizna M. Schoeman ◽  
Nicole S. Fraser ◽  
Melinda M. Dean ◽  
Assia Moussa ◽  
...  
Keyword(s):  

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Donghui Ma ◽  
Mengjie Lu ◽  
Zhichang Cheng ◽  
Xingnan Du ◽  
Xiaoyu Zou ◽  
...  

Abstract Background Parental investment by birds is limited by the habitat environment, and a male parent increases its effort to reproduce in birds that live in high-altitude areas. Methods A study of the reproductive behaviour of the Saxaul Sparrow (Passer ammodendri) and the Isabelline Shrike (Lanius isabellinus) was carried out at the Gansu An’xi Extremely Arid Desert National Nature Reserve in northwest China to determine the reproductive input of passerine species in desert habitats. Results In Saxaul Sparrows, compared to the female parent, the male parent exhibited a significantly higher frequency of nest-defense behaviour (chirping and warning) during nesting, hatching and feeding periods. In addition, in comparison to the female parent, the male parent exhibited almost equal frequencies of nesting and incubation but fed nestlings significantly more times. Similar to the male sparrows, the feeding rates of the male Isabelline Shrikes were significantly higher than those of the females. The hatching rate and fledging rate of the Saxaul Sparrow on average in this study were 81.99 and 91.92%, respectively, while those of the shrike were 69.00 and 96.53%, respectively. Conclusions These two different passerine species living in the same desert environment exhibited the same trend in their reproductive investments. Adapting to desert environments is a strategy that may have evolved in passerines where male parent birds put more effort than females into reproduction to ensure high reproductive output.


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