scholarly journals Convolutional neural networks to automate the screening of malaria in low-resource countries

PeerJ ◽  
2020 ◽  
Vol 8 ◽  
pp. e9674
Author(s):  
Oliver S. Zhao ◽  
Nikhil Kolluri ◽  
Anagata Anand ◽  
Nicholas Chu ◽  
Ravali Bhavaraju ◽  
...  

Malaria is an infectious disease caused by Plasmodium parasites, transmitted through mosquito bites. Symptoms include fever, headache, and vomiting, and in severe cases, seizures and coma. The World Health Organization reports that there were 228 million cases and 405,000 deaths in 2018, with Africa representing 93% of total cases and 94% of total deaths. Rapid diagnosis and subsequent treatment are the most effective means to mitigate the progression into serious symptoms. However, many fatal cases have been attributed to poor access to healthcare resources for malaria screenings. In these low-resource settings, the use of light microscopy on a thin blood smear with Giemsa stain is used to examine the severity of infection, requiring tedious and manual counting by a trained technician. To address the malaria endemic in Africa and its coexisting socioeconomic constraints, we propose an automated, mobile phone-based screening process that takes advantage of already existing resources. Through the use of convolutional neural networks (CNNs), we utilize a SSD multibox object detection architecture that rapidly processes thin blood smears acquired via light microscopy to isolate images of individual red blood cells with 90.4% average precision. Then we implement a FSRCNN model that upscales 32 × 32 low-resolution images to 128 × 128 high-resolution images with a PSNR of 30.2, compared to a baseline PSNR of 24.2 through traditional bicubic interpolation. Lastly, we utilize a modified VGG16 CNN that classifies red blood cells as either infected or uninfected with an accuracy of 96.5% in a balanced class dataset. These sequential models create a streamlined screening platform, giving the healthcare provider the number of malaria-infected red blood cells in a given sample. Our deep learning platform is efficient enough to operate exclusively on low-tier smartphone hardware, eliminating the need for high-speed internet connection.

2021 ◽  
Vol 11 (5) ◽  
pp. 2284
Author(s):  
Asma Maqsood ◽  
Muhammad Shahid Farid ◽  
Muhammad Hassan Khan ◽  
Marcin Grzegorzek

Malaria is a disease activated by a type of microscopic parasite transmitted from infected female mosquito bites to humans. Malaria is a fatal disease that is endemic in many regions of the world. Quick diagnosis of this disease will be very valuable for patients, as traditional methods require tedious work for its detection. Recently, some automated methods have been proposed that exploit hand-crafted feature extraction techniques however, their accuracies are not reliable. Deep learning approaches modernize the world with their superior performance. Convolutional Neural Networks (CNN) are vastly scalable for image classification tasks that extract features through hidden layers of the model without any handcrafting. The detection of malaria-infected red blood cells from segmented microscopic blood images using convolutional neural networks can assist in quick diagnosis, and this will be useful for regions with fewer healthcare experts. The contributions of this paper are two-fold. First, we evaluate the performance of different existing deep learning models for efficient malaria detection. Second, we propose a customized CNN model that outperforms all observed deep learning models. It exploits the bilateral filtering and image augmentation techniques for highlighting features of red blood cells before training the model. Due to image augmentation techniques, the customized CNN model is generalized and avoids over-fitting. All experimental evaluations are performed on the benchmark NIH Malaria Dataset, and the results reveal that the proposed algorithm is 96.82% accurate in detecting malaria from the microscopic blood smears.


Computation ◽  
2021 ◽  
Vol 9 (3) ◽  
pp. 35
Author(s):  
Hind R. Mohammed ◽  
Zahir M. Hussain

Accurate, fast, and automatic detection and classification of animal images is challenging, but it is much needed for many real-life applications. This paper presents a hybrid model of Mamdani Type-2 fuzzy rules and convolutional neural networks (CNNs) applied to identify and distinguish various animals using different datasets consisting of about 27,307 images. The proposed system utilizes fuzzy rules to detect the image and then apply the CNN model for the object’s predicate category. The CNN model was trained and tested based on more than 21,846 pictures of animals. The experiments’ results of the proposed method offered high speed and efficiency, which could be a prominent aspect in designing image-processing systems based on Type 2 fuzzy rules characterization for identifying fixed and moving images. The proposed fuzzy method obtained an accuracy rate for identifying and recognizing moving objects of 98% and a mean square error of 0.1183464 less than other studies. It also achieved a very high rate of correctly predicting malicious objects equal to recall = 0.98121 and a precision rate of 1. The test’s accuracy was evaluated using the F1 Score, which obtained a high percentage of 0.99052.


Proceedings ◽  
2020 ◽  
Vol 54 (1) ◽  
pp. 31
Author(s):  
Joaquim de Moura ◽  
Lucía Ramos ◽  
Plácido L. Vidal ◽  
Jorge Novo ◽  
Marcos Ortega

The new coronavirus (COVID-19) is a disease that is caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). On 11 March 2020, the coronavirus outbreak has been labelled a global pandemic by the World Health Organization. In this context, chest X-ray imaging has become a remarkably powerful tool for the identification of patients with COVID-19 infections at an early stage when clinical symptoms may be unspecific or sparse. In this work, we propose a complete analysis of separability of COVID-19 and pneumonia in chest X-ray images by means of Convolutional Neural Networks. Satisfactory results were obtained that demonstrated the suitability of the proposed system, improving the efficiency of the medical screening process in the healthcare systems.


2021 ◽  
Vol 18 (2) ◽  
pp. 4-15
Author(s):  
Luan Oliveira Silva ◽  
◽  
Leandro dos Santos Araújo ◽  
Victor Ferreira Souza ◽  
Raimundo Matos Barros Neto ◽  
...  

Pneumonia is one of the most common medical problems in clinical practice and is the leading fatal infectious disease worldwide. According to the World Health Organization, pneumonia kills about 2 million children under the age of 5 and is constantly estimated to be the leading cause of infant mortality, killing more children than AIDS, malaria, and measles combined. A key element in the diagnosis is radiographic data, as chest x-rays are routinely obtained as a standard of care and can aid to differentiate the types of pneumonia. However, a rapid radiological interpretation of images is not always available, particularly in places with few resources, where childhood pneumonia has the highest incidence and mortality rates. As an alternative, the application of deep learning techniques for the classification of medical images has grown considerably in recent years. This study presents five implementations of convolutional neural networks (CNNs): ResNet50, VGG-16, InceptionV3, InceptionResNetV2, and ResNeXt50. To support the diagnosis of the disease, these CNNs were applied to solve the classification problem of medical radiographs from people with pneumonia. InceptionResNetV2 obtained the best recall and precision results for the Normal and Pneumonia classes, 93.95% and 97.52% respectively. ResNeXt50 achieved the best precision and f1-score results for the Normal class (94.62% and 94.25% respectively) and the recall and f1-score results for the Pneumonia class (97.80% and 97.65%, respectively).


Author(s):  
Daisuke Sakota ◽  
Kazuki Kondo ◽  
Ryo Kosaka ◽  
Masahiro Nishida ◽  
Osamu Maruyama

Abstract This work investigates the plasma skimming effect in a spiral groove bearing within a hydrodynamically levitated centrifugal blood pump when working with human blood having a hematocrit value from 0 to 40%. The present study assessed the evaluation based on a method that clarified the limitations associated with such assessments. Human blood was circulated in a closed-loop circuit via a pump operating at 4000 rpm at a flow rate of 5 L/min. Red blood cells flowing through a ridge area of the bearing were directly observed using a high-speed microscope. The hematocrit value in the ridge area was calculated using the mean corpuscular volume, the bearing gap, the cross-sectional area of a red blood cell, and the occupancy of red blood cells. The latter value was obtained from photographic images by dividing the number of pixels showing red blood cells in the evaluation area by the total number of pixels in this area. The plasma skimming efficiency was calculated as the extent to which the hematocrit of the working blood was reduced in the ridge area. For the hematocrit in the circuit from 0 to 40%, the plasma skimming efficiency was approximately 90%, meaning that the hematocrit in the ridge area became 10% as compared to that in the circuit. For a hematocrit of 20% and over, red blood cells almost completely occupied the ridge. Thus, a valid assessment of plasma skimming was only possible when the hematocrit was less than 20%.


2019 ◽  
Vol 2019 ◽  
pp. 1-12 ◽  
Author(s):  
Hesham M. Eraqi ◽  
Yehya Abouelnaga ◽  
Mohamed H. Saad ◽  
Mohamed N. Moustafa

The World Health Organization (WHO) reported 1.25 million deaths yearly due to road traffic accidents worldwide and the number has been continuously increasing over the last few years. Nearly fifth of these accidents are caused by distracted drivers. Existing work of distracted driver detection is concerned with a small set of distractions (mostly, cell phone usage). Unreliable ad hoc methods are often used. In this paper, we present the first publicly available dataset for driver distraction identification with more distraction postures than existing alternatives. In addition, we propose a reliable deep learning-based solution that achieves a 90% accuracy. The system consists of a genetically weighted ensemble of convolutional neural networks; we show that a weighted ensemble of classifiers using a genetic algorithm yields a better classification confidence. We also study the effect of different visual elements in distraction detection by means of face and hand localizations, and skin segmentation. Finally, we present a thinned version of our ensemble that could achieve 84.64% classification accuracy and operate in a real-time environment.


Sensors ◽  
2019 ◽  
Vol 19 (16) ◽  
pp. 3556 ◽  
Author(s):  
Husein Perez ◽  
Joseph H. M. Tah ◽  
Amir Mosavi

Clients are increasingly looking for fast and effective means to quickly and frequently survey and communicate the condition of their buildings so that essential repairs and maintenance work can be done in a proactive and timely manner before it becomes too dangerous and expensive. Traditional methods for this type of work commonly comprise of engaging building surveyors to undertake a condition assessment which involves a lengthy site inspection to produce a systematic recording of the physical condition of the building elements, including cost estimates of immediate and projected long-term costs of renewal, repair and maintenance of the building. Current asset condition assessment procedures are extensively time consuming, laborious, and expensive and pose health and safety threats to surveyors, particularly at height and roof levels which are difficult to access. This paper aims at evaluating the application of convolutional neural networks (CNN) towards an automated detection and localisation of key building defects, e.g., mould, deterioration, and stain, from images. The proposed model is based on pre-trained CNN classifier of VGG-16 (later compaired with ResNet-50, and Inception models), with class activation mapping (CAM) for object localisation. The challenges and limitations of the model in real-life applications have been identified. The proposed model has proven to be robust and able to accurately detect and localise building defects. The approach is being developed with the potential to scale-up and further advance to support automated detection of defects and deterioration of buildings in real-time using mobile devices and drones.


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