circular dichroic spectroscopy
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Molecules ◽  
2021 ◽  
Vol 26 (19) ◽  
pp. 5981
Author(s):  
Alison Domzalski ◽  
Liliana Margent ◽  
Valeria Vigo ◽  
Faizunnahar Dewan ◽  
Naga Vara Kishore Pilarsetty ◽  
...  

2,5-diketopiperazines (DKPs) are cyclic dipeptides ubiquitously found in nature. In particular, cyclo(Phe-Pro), cyclo(Leu-Pro), and cyclo(Val-Pro) are frequently detected in many microbial cultures. Each of these DKPs has four possible stereoisomers due to the presence of two chirality centers. However, absolute configurations of natural DKPs are often ambiguous due to the lack of a simple, sensitive, and reproducible method for stereochemical assignment. This is an important problem because stereochemistry is a key determinant of biological activity. Here, we report a synthetic DKP library containing all stereoisomers of cyclo(Phe-Pro), cyclo(Leu-Pro), and cyclo(Val-Pro). The library was subjected to spectroscopic characterization using mass spectrometry, NMR, and electronic circular dichroism (ECD). It turned out that ECD can clearly differentiate DKP stereoisomers. Thus, our ECD dataset can serve as a reference for unambiguous stereochemical assignment of cyclo(Phe-Pro), cyclo(Leu-Pro), and cyclo(Val-Pro) samples from natural sources. The DKP library was also subjected to a biological screening using assays for E. coli growth and biofilm formation, which revealed distinct biological effects of cyclo(D-Phe-L-Pro).


2014 ◽  
Vol 13 (01) ◽  
pp. 1450006 ◽  
Author(s):  
Kamatchi Sankaranarayanan ◽  
M. Kalaiyarasi ◽  
B. Sreedhar ◽  
B. U. Nair ◽  
A. Dhathathreyan

In this work, Langmuir films of organized assemblies of β-lactoglobulin (βLG) with 1-ethyl-3-methyl imidazolium ethyl sulfate (IL-emes) have been characterized at air/water interface using surface pressure-specific area isotherms and dilational rheology. The protein in the IL-mediated assembly shows excellent packing at the interface and is stable as seen in circular dichroic spectroscopy. These spread films on nickel chloride were transferred as Langmuir–Schaffer films of βLG and βLG+IL-emes and used as template for designing nanoclusters of nickel oxide. The nanoclusters have been characterized using transmission electron microscopy (TEM) and powder XRD. While pure protein template gives needle-shaped structures, the IL-mediated template gives spherical shapes of hexagonal nickel oxide in the range 30 nm to 40 nm. Presence of ionic liquid seems to slow down the growth of the cluster and also prevents aggregation of the clusters.


Biochemistry ◽  
2003 ◽  
Vol 42 (4) ◽  
pp. 1000-1007 ◽  
Author(s):  
Mónica Balsera ◽  
Juan B. Arellano ◽  
José R. Gutiérrez ◽  
Pedro Heredia ◽  
José L. Revuelta ◽  
...  

1998 ◽  
Vol 51 (4) ◽  
pp. 255 ◽  
Author(s):  
Robert W. Baker ◽  
Song Liu ◽  
Melvyn V. Sargent

The synthesis of (+)-(S)-1′,4-dihydroxy-2,3′-dimethyl-1,2′-binaphthalene-5,5′,8,8′-tetrone (62) and (+)-(S)-4,5′,8′-trihydroxy-2,3′-dimethyl-1,2′-binaphthalene-1′,4′,5,8-tetrone (55), compounds which are atrop-isomeric with the naturally occurring binaphthoquinones (–)-isodiospyrin and (–)-8′-hydroxyisodiospyrin, respectively, is described. The binaphthyl linkages in these compounds were stereoselectively constructed by using oxazoline chemistry. The stereochemical assignments were based on X-ray crystal structure determination and circular dichroic spectroscopy.


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