Chromosome Evolution in the Genus Partamona (Apidae: Meliponini), with Comments on B Chromosome Origin

The genus <i>Partamona</i> includes 33 species of stingless bees, of which 11 were studied cytogenetically. The main goal of this study was to propose a hypothesis about chromosomal evolution in <i>Partamona</i> by combining molecular and cytogenetic data. Cytogenetic analyses were performed on 3 <i>Partamona</i> species. In addition, the molecular phylogeny included mitochondrial sequences of 11 species. Although the diploid number was constant within the genus, 2n = 34, B chromosomes were reported in 7 species. Cytogenetic data showed karyotypic variations related to chromosome morphology and the amount and distribution of heterochromatin and repetitive DNA. The molecular phylogenetic reconstruction corroborated the monophyly of the genus and separated the 2 clades (A and B). This separation was also observed in the cytogenetic data, in which species within each clade shared most of the cytogenetic characteristics. Furthermore, our data suggested that the B chromosome in the genus <i>Partamona</i> likely originated from a common ancestor of the species that have it in clade B and, through interspecific hybridization, it appeared only in <i>Partamona rustica</i> from clade A. Based on the above, <i>Partamona</i> is an interesting genus for further investigations using molecular mapping of B chromosomes as well as for broadening phylogenetic data.

Distribution of GC-rich heterochromatin and ribosomal genes in three fungus-farming ants (Myrmicinae, Attini, Attina): insights on chromosomal evolution

Cytogenetic studies on fungus-farming ants have shown remarkable karyotype diversity, suggesting different chromosomal rearrangements involved in karyotype evolution in some genera. A notable cytogenetic characteristic in this ant group is the presence of GC-rich heterochromatin in the karyotypes of some ancient and derivative species. It was hypothesized that this GC-rich heterochromatin may have a common origin in fungus-farming ants, and the increase in species studied is important for understanding this question. In addition, many genera within the subtribe Attina have few or no cytogenetically studied species; therefore, the processes that shaped their chromosomal evolution remain obscure. Thus, in this study, we karyotyped, through classical and molecular cytogenetic techniques, the fungus-farming ants Cyphomyrmex transversus Emery, 1894, Sericomyrmex maravalhas Ješovnik et Schultz, 2017, and Mycetomoellerius relictus (Borgmeier, 1934), to provide insights into the chromosomal evolution in these genera and to investigate the presence the GC-rich heterochromatin in these species. Cyphomyrmex transversus (2n = 18, 10m + 2sm + 6a) and S. maravalhas (2n = 48, 28m + 20sm) showed karyotypes distinct from other species from their genera. Mycetomoellerius relictus (2n = 20, 20m) presented the same karyotype as the colonies previously studied. Notably, C. transversus presented the lowest chromosomal number for the genus and a distinct karyotype from the other two previously observed for this species, showing the existence of a possible species complex and the need for its taxonomic revision. Chromosomal banding data revealed GC-rich heterochromatin in all three species, which increased the number of genera with this characteristic, supporting the hypothesis of a common origin of GC-rich heterochromatin in Attina. Although a single chromosomal pair carries rDNA genes in all studied species, the positions of these rDNA clusters varied. The rDNA genes were located in the intrachromosomal region in C. transversus and M. relictus, and in the terminal region of S. maravalhas. The combination of our molecular cytogenetic data and observations from previous studies corroborates that a single rDNA site located in the intrachromosomal region is a plesiomorphic condition in Attina. In addition, cytogenetic data obtained suggest centric fission events in Sericomyrmex Mayr, 1865, and the occurrence of inversions as the origin of the location of the ribosomal genes in M. relictus and S. maravalhas. This study provides new insights into the chromosomal evolution of fungus-farming ants.

Statistical analysis of cytogenetic data

Using the data obtained in a cytogenetic study as an example, we consider the typical errors that are made when performing statistical analysis. Widespread but flawed statistical analysis inevitably produces biased results and increases the likelihood of incorrect scientific conclusions. Errors occur due to not taking into account the study design and the structure of the analyzed data. The article shows how the numerical imbalance of the data set leads to a bias in the result. Using a dataset as an example, it explains how to balance the complex. It shows the advantage of presenting sample indicators with confidence intervals instead of statistical errors. Attention is drawn to the need to take into account the size of the analyzed shares when choosing a statistical method. It shows how the same data set can be analyzed in different ways depending on the purpose of the study. The algorithm of correct statistical analysis and the form of the tabular presentation of the results are described. Keywords: data structure, numerically unbalanced complex, confidence interval.

New record of Humbertium proserpina (Humbert, 1862) from Tenkasi district, Tamil Nadu, India

Species of genus Humbertium (Land planarian) are widely distributed in Southeast Asia, around greenhouses and gardens. However, taxonomy and cytogenetic data in this genus are restricted to a few species. Present report of hammerhead snake worm recorded from five falls in Courtallam, Tenkasi district, Tamil Nadu, India.Species was identified based on the photographs. This the first record of species from the Western Ghats in Tenkasi district of Tamil Nadu, India.

Formal Assignation of the Kissing Bug Triatomalecticularia (Hemiptera: Reduviidae: Triatominae) to the Genus Paratriatoma

The subfamily Triatominae (Hemiptera: Reduviidae) comprises hematophagous insects that are vectors of Chagas disease; including species assigned to the genera Triatoma and Paratriatoma. Initial examination of Triatoma lecticularia revealed the hirsuteness covering the entire body—a characteristic and striking feature of members of the genus Paratriatoma—and a systematic study revealed several other morphological characters that are in diagnostic alignment with Paratriatoma. Based on the examination of several specimens (including the lectotype), and with the additional support of molecular and cytogenetic data, we propose the formal transferal of Triatoma lecticularia (Stål, 1859) into the genus Paratriatoma with the resulting new combination: Paratriatoma lecticularia (Stål, 1859) comb. nov. (Hemiptera: Reduviidae: Triatominae).

Chagas Disease Vectors of Paraguay: Entomoepidemiological Aspects of Triatoma sordida (Stål, 1859) and Development of an Identification Key for Paraguayan Triatomines Based on Cytogenetics Data

Approximately 150,000 people are living with Chagas disease in Paraguay. Although the country has been since 2008 considered as one of the countries that succeeded in interrupted the vector transmission of Chagas by Triatoma infestans in houses of the eastern region, there are nine other species notified in the country that are potential vectors and also deserve attention from vector control programs. Thus, we carried out an entomoepidemiological study of T. sordida in the eastern and western regions of the country and we developed an identification key for Paraguay's triatomines based on cytogenetic data. Between the years 2003 to 2004, 271 specimens of T. sordida were captured in domestic, peridomestic, and wild ecotopes, with 131 insects caught in the eastern (Alto Paraguay, Boquerón and Pte. Hayes) and 140 in the western region of Paraguay (Guairá and Paraguarí). High rates of peridomicillary infestation were observed for both regions. Besides that, the natural infection of the captured insects was detected by optical microscopy in 12% and 10%, and by PCR in 21% and 20% in the eastern and western regions, respectively. Based on cytogenetic data from nine of ten species notified in Paraguay, an identification key was developed to differentiate all taxa. Thus, given the vectorial importance of T. sordida, we highlight the need for continued attention from Paraguay's vector control programs for this species. Further, we provide a taxonomic key that assists in the correct classification of Paraguayan triatomines.

Biological, ecological, morphological and cytogenetic analyses, with taxonomic notes of Zelurus ochripennis (Stål, 1854) (Hemiptera: Heteroptera: Reduviidae: Reduviinae)

Based on specimens of Zelurus ochripennis (Stål, 1854) collected in the entrance zone of a small terrestrial cave, some biological, ecological, morphological and cytogenetic data, as well, as the general morphology of their nymphs are presented for the first time. A short taxonomic summary of the species is also provided.

About classical molecular genetics, cytogenetic and molecular cytogenetic data not considered by Genome Reference Consortium and thus not included in genome browsers like UCSC, Ensembl or NCBI

Background The Genome Reference Consortium (GRC) has according to its own statement the “mission to improve the human reference genome assembly, correcting errors and adding sequence to ensure it provides the best representation of the human genome to meet basic and clinical research needs”. Data from GRC is included in genome browsers like UCSC (University of California, Santa Cruz), Ensembl or NCBI (National Center for Biotechnology Information) and are thereby bases for scientific and diagnostically working human genetic community. Method Here long standing knowledge deriving from classical molecular genetic, cytogenetic and molecular cytogenetic data, not being considered yet by GRC was revisited. Results There were three major points identified: (1) GRC missed to including three chromosomal subbands, each, for 1q32.1, 2p21, 5q13.2, 6p22.3 and 6q21, which were defined by International System for Human Cytogenetic Nomenclature (ISCN) already back in 1980s; instead GRC included additional 6 subbands not ever recognized by ISCN. (2) GRC defined 34 chromosomal subbands of 0.1 to 0.9 Mb in size, while it is general agreement of cytogeneticists that it unlikely to detect chromosomal aberrations below 1–2 Mb in size by GTG-banding. And (3): still all sequences used in molecular cytogenetic routine diagnostics to detect heterochromatic and/ or pericentromeric satellite DNA sequences within the human genome are not included yet into human reference genome. For those sequences, localization and approximate sizes have been determined in the 1970s to 1990, and if included at least ~ 100 Mb of the human genome sequence could be added to the genome browsers. Conclusion Overall, taking into account the here mentioned points and correcting and including the data will definitely provide to the still not being completely finished mapping of the human genome.

CYTOGENETIC INDICATORS OF ACUTE RADIATION SICKNESS (THE CHORNOBYL EXPERIENCE)

The objective of the study was to improve the biological dosimetry approach among patients with acute radiation sickness of various degrees based on the analysis of radiation-induced chromosome aberrations in peripheral blood lymphocytes of the victims. Materials and methods. The study was based on primary cytogenetic data obtained in May 1986 within examination of the 30 clean-up workers («liquidators») having got stage I–III acute radiation sickness. Dose verification was performed using the cytogenetic dosimetry based on a culture of peripheral blood lymphocytes with metaphase analysis of chromosome aberrations. Results. A new method of evaluating the results of patients’ cytogenetic examination at the beginning of specific therapy has been developed. Procedure was performed using a model of multiple linear regression (complex of cytogenetic parameters) and provided a satisfactory diagnostic level (featuring a compliance with initially defined clinical and laboratory diagnoses). Overall frequency of the aberrant cells and radiation markers increased in higher disease stages. There was a trend of the frequency growth of chromatid-type aberrations with increasing of radiation burden. Adequacy of the proposed method based on the regression analysis of cytogenetic results was confirmed through the preservation of group differences in estimates of disease stage in subjects with verified diagnosis. Conclusion. Cytogenetic dosimetry in the scope of examination of persons exposed to ionizing radiation is an obligatory component of radiation sickness stage verification. The recommended method of cytogenetic data evaluation before and at the beginning of detoxification therapy provides a satisfactory level of diagnostics. Key words: acute radiation sickness, Chornobyl NPP accident, cytogenetic dosimetry, blood lymphocytes, chromosome aberrations, multiple linear regression model.