A Comparative Diversity Analysis of Soil Nematodes of Rajouri, Jammu and Kashmir, India

Diversity of Nematode communities in Pir Panjal range of Jammu and Kashmir along with nematodes’ driven indices were studied. Himalayan mountainous areas of district Rajouri were selected. Community composition and trophic structure (feeding types) were assessed and were analyzed at various altitudes and across varied habitats, which differ significantly on moving from low elevation to high elevation areas. A total of 47 genera were recorded across mountain clines. In terms of taxonomic groups, in higher elevations, the order Dorylaimids represent 55.18%, followed by Tylenchida 28.85%, Mononchida 2.38%, Rhabditida 2.18%, and Aphelenchida 2.05%, whereas in the lower reaches, the order Rhabditida represent 30.18%, followed by Dorylaimids 28.75%, Tylenchida 15.85%, Mononchida 10.05% and Aphelenchida 1.05%. In terms of trophic groups, in the upper reaches, omnivores (56.6%) predominate, representing highest number, followed by plant parasitic (33.4%), bacterivore (4.2%), predatory (3.2%) and fungivore (2.60%). In the lower reaches, Bacterivores (38.08%) predominates, followed by omnivores (29.85%), plant parasitic (18.5%), predatory (12.5%) and fungivores (1.07%). The total nematode abundance and diversity were found increasing with elevation This pattern applied to most genera and feeding types. Across the regions, nematode diversity and community composition increases positively with elevations and richer habitats as given by Simpson index and Shannon-Weaver index. We conclude that nematode assemblages are potentially good bioindicators of climate change. They reacted sensitively and predictably to the changing environment. Thus, nematodes have suitability for long-term monitoring of biodiversity and community changes. Sampling techniques are well standardized and inexpensive. Furthermore, feeding types of nematodes can be determined with minimal taxonomic skills.

Roots With Larger Specific Root Length and C: N Ratio Sustain More Complex Nematode Community

Aims Roots bridge above and belowground systems, and play a pivotal role in structuring root-associated organisms via influencing food resources and habitat conditions. Most studies focused on the relationships between plant identity and root-associated organisms, however, little is known about how root traits affect nematode communities within the rhizosphere. Methods We investigated the relationships between root traits of four plant species and nematode diversity, community structure and trophic complexity in an ex-arable field. Results While the relative abundance of herbivorous nematodes was negatively associated with specific root length (SRL), specific root area (SRA), root length density (RLD) and root C: N ratio, free-living nematodes were positively affected by these traits, implying a multifaceted effect of root traits on root-associated organisms. Importantly, we found that finer root systems promoted the complexity of the nematode community, by increasing the relative abundance of high trophic-level nematodes (i.e., omnivores and predators) and enhancing nematode diversity. Conclusion Our findings suggest that root traits could be reliable indicators of soil community structure and interactions, and provide new insights into soil biodiversity and functional maintenance.

Soil Microbial and Nematode Community Response to the Field Application of Recycled Bio-Based Fertilisers in Irish Grassland

Phosphorus (P) is an essential plant nutrient routinely applied to soils as an agricultural fertiliser, frequently in non-renewable, inorganic forms. Finite reserves and growing demand for agricultural phosphorus mean alternative P resources need to be explored. Recycling-derived fertilisers (RDF) recovered from specific waste streams, using nutrient recovery technologies, have the potential to replace conventional phosphorus fertilisers used in agriculture. Healthy functioning soil microbial and nematode communities are essential players in maintaining soil health and nutrient status. Thus, it is important to assess the responses of these communities to RDF application. We compared soil microbial and nematode communities of conventional fertiliser and RDF treated soil, in the form of struvite and ash, using next-generation sequencing (NGS) technologies in a phosphate-fertiliser replacement value (P-FRV) field trial. Bacterial and nematode communities displayed significant changes under the different P fertilisation treatments, while fungal communities were relatively unaffected. Bacterial diversity was higher among RDF treatments than conventional treatments, while nematode diversity was reduced by one ash treatment. Available potassium and phosphate were the main drivers of bacterial community changes when analysed by canonical correspondence analysis (CCA), while available phosphate alone was the driver of nematode community shifts. Of the RDF, struvite products yielded the highest crop biomass, maintained microbial diversity and were associated with the least disturbed nematode communities.

First Report of Three Tylenchidae Taxa from Southern Alberta, Canada

Members of the family Tylenchidae are highly abundant in soil habitats, including agricultural settings, where they play key ecological roles. In the present study, we identified three Tylenchidae species, namely Basiria bhabi, Coslenchus acceptus, and Filenchus vulgaris, using integrative taxonomy. The detailed morphological and morphometric characteristics, distribution, and host associations of each species were also discussed. Phylogenetic analyses of these populations with other Tylenchidae nematodes indicated the presence of divergent lineages in Filenchus and Basiria, whereas Coslenchus appeared to be a monophyletic genus. Herein, we aim to grow awareness about this common but least studied group of nematodes. The species reported in this study are new records for Canada, revealing that the identified nematode diversity in our cultivated areas is relatively underrepresented. Our analyses also provided greater taxonomic resolution and captured rare taxa that might have been missed or misidentified in prior nematode inventory surveys. These findings will add to our understanding of the nematofauna of southern Alberta, thereby providing a more complete picture of existing nematode diversity present in the fields of this highly cultivated region.

First Evidence That Nematode Communities in Deadwood Are Related to Tree Species Identity and to Co-Occurring Fungi and Prokaryotes

Nematodes represent a diverse and ubiquitous group of metazoans in terrestrial environments. They feed on bacteria, fungi, plants, other nematodes or parasitize a variety of animals and hence may be considered as active members of many food webs. Deadwood is a structural component of forest ecosystems which harbors many niches for diverse biota. As fungi and bacteria are among the most prominent decomposing colonizers of deadwood, we anticipated frequent and diverse nematode populations to co-occur in such ecosystems. However, knowledge about their ability to colonize this habitat is still limited. We applied DNA-based amplicon sequencing (metabarcoding) of the 18S rRNA gene to analyze nematode communities in sapwood and heartwood of decaying logs from 13 different tree species. We identified 247 nematode ASVs (amplicon sequence variants) from 27 families. Most of these identified families represent bacterial and fungal feeders. Their composition strongly depended on tree species identity in both wood compartments. While pH and water content were the only wood properties that contributed to nematodes’ distribution, co-occurring fungal and prokaryotic (bacteria and archaea) α- and β-diversities were significantly related to nematode communities. By exploring thirteen different tree species, which exhibit a broad range of wood characteristics, this study provides first and comprehensive insights into nematode diversity in deadwood of temperate forests and indicates connectivity to other wood-inhabiting organisms.

Biological indicative assessment of nematodes in evaluating different terrestrial habitats

Healthy soil ecosystem plays crucial role maintaining global biosphere and developing sustainable agricultural practices. Land exploitation and improper agricultural practices greatly impact the soil health quality in time and space. Understanding the effects of organic and inorganic enrichments on soil quality and its indicators has been identified as one of the most important goals for modern soil science. For the present study, we compared the differences in the nematode diversity of healthy undisturbed soil with soil enriched with organic amendments and inorganic amendments. Soil samples were collected from three different habitats viz., organic enriched soil, inorganic enriched soil and undisturbed soil in rural and urban areas. Nematode community structure was studied in terms of frequency, density, biomass, trophic diversity and other common diversity or ecological indices. A total of 56, 61 and 72 nematode genera/species were identified in organic enriched, inorganic enriched and undisturbed soil. Shannon’s diversity index (H′) values were higher in undisturbed habitat than organic and inorganic enriched soil indicated that diversity of species was highest in undisturbed habitats. The Maturity index (MI), Structure Index (SI) was lowest and Enrichment Index (EI) was highest for organic and inorganic enriched soil revealed unstable and disturbed ecosystem. While in undisturbed habitats MI, SI were high and EI was lowest reflect stable and structured ecosystem. This study will provide a base for stakeholders mainly in land use and sustainable agricultural practices and serves as a triggering mechanism for implementation of soil contamination mitigating strategies.