Abundance of the Resplendent Quetzal Pharomachrus mocinno (Trogoniformes, Trogonidae) in the tourist sector of a cloud forest reserve

The Resplendent Quetzal (Pharomachrus mocinno) exhibits characteristics that are common to species prone to extinction, such as occurring at low densities, presenting strict ecological requirements, and inhabiting locations with high rates of degradation. The lack of data on the abundance of threatened species makes it difficult to make management decisions and does not allow to know trends over time, which is essential for conservation in their distribution areas. The abundance and density of the Resplendent Quetzal was estimated from audio/visual detections analyzed with distance sampling techniques. Data was collected in the public use sector of La Tigra National Park, a reserve of virgin and secondary growth cloud forest in Honduras, Central America. A population N = 136 was found with a density of 40 quetzals per km2. There are no systematic studies on the population size and density of the species for this site since 1979, in which a population of 145 quetzals was reported. The estimation of the Resplendent Quetzal population for the total area of the park is a main research priority, which will make it possible to evaluate the viability of the species and the establishment of a new baseline for conservation policies and environmental education efforts in the area of influence.

Roe deer population trend after reintroduction of Eurasian lynx within the Palatinate Forest: a first insight into a long-term study

After becoming extinct approximately 250 years ago in the Palatinate Forest, the first Eurasian lynx (Lynx lynx) were reintroduced within this area in 2016, with 20 lynx reintroduced in the following five years. We observed the roe deer population within the Palatinate Forest before (2016) and during (2017–2019) the lynx reintroduction by estimating the population and evaluating the hunting bag. The roe deer population estimation based on the distance sampling method was conducted on ten defined transects with an average length of 48 km from 2016 to 2019, observing a 6,000 km transect length for 120 nights overall. An average of 6.54 ± 1.28 roe deer km-² was estimated over the course of the four years (2016 – 2019). Since we suspect that our estimations might underestimate the roe deer population within the Palatinate Forest, hence we preferred to use the roe deer count index for further analysis. Over the first four years (2016–2019), significant differences were neither found in the roe deer count index nor for the hunting bag in relation to the reintroduction of the lynx. The data and findings presented in this study provide a first insight into a long-term observation of a predator-prey system within the Palatinate Forest, with roe deer not having experienced a natural predator over a long time. In order to make coherent interpretations, long-term data is needed to estimate the population trends of both species within the Palatinate Forest.

Invasive snake causes massive reduction of all endemic herpetofauna on Gran Canaria

Invasive snakes represent a serious threat to island biodiversity, being responsible for far-reaching impacts that are noticeably understudied, particularly regarding native reptiles. We analysed the impact of the invasive California kingsnake, Lampropeltis californiae —recently introduced in the Canary Islands—on the abundance of all endemic herpetofauna of the island of Gran Canaria. We quantified the density in invaded and uninvaded sites for the Gran Canaria giant lizard, Gallotia stehlini , the Gran Canaria skink, Chalcides sexlineatus , and Boettger's wall gecko, Tarentola boettgeri . We used spatially explicit capture-recapture and distance-sampling methods for G. stehlini and active searches under rocks for the abundance of the other two reptiles. The abundance of all species was lower in invaded sites, with a reduction in the number of individuals greater than 90% for G. stehlini , greater than 80% for C. sexlineatus and greater than 50% for T. boettgeri in invaded sites. Our results illustrate the severe impact of L. californiae on the endemic herpetofauna of Gran Canaria and highlight the need for strengthened measures to manage this invasion. We also provide further evidence of the negative consequences of invasive snakes on island reptiles and emphasize the need for further research on this matter on islands worldwide.

Distance sampling surveys reveal 17 million vertebrates directly killed by the 2020’s wildfires in the Pantanal, Brazil

Anthropogenic factors have significantly influenced the frequency, duration, and intensity of meteorological drought in many regions of the globe, and the increased frequency of wildfires is among the most visible consequences of human-induced climate change. Despite the fire role in determining biodiversity outcomes in different ecosystems, wildfires can cause negative impacts on wildlife. We conducted ground surveys along line transects to estimate the first-order impact of the 2020 wildfires on vertebrates in the Pantanal wetland, Brazil. We adopted the distance sampling technique to estimate the densities and the number of dead vertebrates in the 39,030 square kilometers affected by fire. Our estimates indicate that at least 16.952 million vertebrates were killed immediately by the fires in the Pantanal, demonstrating the impact of such an event in wet savanna ecosystems. The Pantanal case also reminds us that the cumulative impact of widespread burning would be catastrophic, as fire recurrence may lead to the impoverishment of ecosystems and the disruption of their functioning. To overcome this unsustainable scenario, it is necessary to establish proper biomass fuel management to avoid cumulative impacts caused by fire over biodiversity and ecosystem services.

Training Set Construction for Genomic Prediction in Auto-Tetraploids: An Example in Potato

Training set construction is an important prerequisite to Genomic Prediction (GP), and while this has been studied in diploids, polyploids have not received the same attention. Polyploidy is a common feature in many crop plants, like for example banana and blueberry, but also potato which is the third most important crop in the world in terms of food consumption, after rice and wheat. The aim of this study was to investigate the impact of different training set construction methods using a publicly available diversity panel of tetraploid potatoes. Four methods of training set construction were compared: simple random sampling, stratified random sampling, genetic distance sampling and sampling based on the coefficient of determination (CDmean). For stratified random sampling, population structure analyses were carried out in order to define sub-populations, but since sub-populations accounted for only 16.6% of genetic variation, there were negligible differences between stratified and simple random sampling. For genetic distance sampling, four genetic distance measures were compared and though they performed similarly, Euclidean distance was the most consistent. In the majority of cases the CDmean method was the best sampling method, and compared to simple random sampling gave improvements of 4–14% in cross-validation scenarios, and 2–8% in scenarios with an independent test set, while genetic distance sampling gave improvements of 5.5–10.5% and 0.4–4.5%. No interaction was found between sampling method and the statistical model for the traits analyzed.

Subtropical Broad-Leaved Urban Forests as the Foremost Dynamic and Complex Habitats for a Wide Range of Bird Species

Broad-leaved subtropical forests are the most productive, diversified, and complex ecosystems on the planet. Unfortunately, they are currently under severe threat from anthropogenic activities, such as. deforestation, housing settlements, and agricultural expansion. In response to these severe effects, the present study was conducted to explore the current conservation status and population structure of a wide range of bird species inhabiting different subtropical broad-leaved urban forests of Pakistan. In total, 2879 individuals comprising 53 species and 28 families were detected between December 2017 and November 2018 as revealed through the distance sampling line transect method. The habitat selection among bird species varied according to vegetation structure and composition, food resources, adjoining habitats, and human settlements. According to IUCN Red List data, one species was deemed vulnerable out of 53 bird species, while the remaining 52 species were ranked as ofleast concern. The findings of the density analysis revealed that bird density varied between six subtropical broad-leaved forests. Palamar (3.954 ± 0.221 birds/ha) and Kityari (3.138 ± 0.162 birds/ha) were densely populated, whereas Kamal Khan (1.102 ± 0.178 birds/ha) was of the least concern. Likewise, the diversity analysis showed that Kamal Khan was a more diverse habitat (Shannon–Wiener Index; H’ = 3.581 ± 0.021). Shahabad was richer (Margalef Richness Index; R1 = 8.007 ± 0.053) and Dob Ghar was evenly distributed (Pielou J Evenness Index; E = 0.940 ± 0.005) compared to other urban habitats studied. Eight foraging guilds were identified among the bird species. Insectivores were the most abundant bird species utilizing the urban dwelling habitats. carnivores/piscivores/insectivores utilized Dob Ghar forest, while more frugivores utilized Kamal Khan and Dob Ghar. Based on the data, it was concluded that subtropical broad-leaved urban forests are dynamic, complex, and of vital significance for a diverse range of bird species.

Altered fire regimes modify lizard communities in globally endangered Araucaria forests of the southern Andes

Wildfire regimes are being altered in ecosystems worldwide. The density of reptiles responds to fires and changes to habitat structure. Some of the most vulnerable ecosystems to human-increased fire frequency are old-growth Araucaria araucana forests of the southern Andes. We investigated the effects of wildfires on the density and richness of a lizard community in these ecosystems, considering fire frequency and elapsed time since last fire. During the 2018/2019 southern summer season, we conducted 71 distance sampling transects to detect lizards in Araucaria forests of Chile in four fire “treatments”: (1) unburned control, (2) long-term recovery, (3) short-term recovery, and (4) burned twice. We detected 713 lizards from 7 species. We found that the density and richness of lizards are impacted by wildfire frequency and time of recovery, mediated by the modification of habitat structure. The lizard community varied from a dominant arboreal species (L. pictus) in unburned and long-recovered stands, to a combination of ground-dwelling species (L. lemniscatus and L. araucaniensis) in areas affected by two fires. Araucaria forests provided key habitat features to forest reptiles after fires, but the persistence of these old-growth forests and associated biodiversity may be threatened given the increase in fire frequency.

An on-ice aerial survey of the Kane Basin polar bear (Ursus maritimus) subpopulation

There is an imminent need to collect information on distribution and abundance of polar bears (Ursus maritimus) to understand how they are affected by the ongoing decrease in Arctic sea ice. The Kane Basin (KB) subpopulation is a group of high-latitude polar bears that ranges between High Arctic Canada and NW Greenland around and north of the North Water polynya (NOW). We conducted a line transect distance sampling aerial survey of KB polar bears during 28 April–12 May 2014. A total of 4160 linear kilometers were flown in a helicopter over fast ice in the fjords and over offshore pack ice between 76° 50′ and 80° N′. Using a mark-recapture distance sampling protocol, the estimated abundance was 190 bears (95% lognormal CI: 87–411; CV 39%). This estimate is likely negatively biased to an unknown degree because the offshore sectors of the NOW with much open water were not surveyed because of logistical and safety reasons. Our study demonstrated that aerial surveys may be a feasible method for obtaining abundance estimates for small subpopulations of polar bears.