An Integrative Model of Carbon and Nitrogen Metabolism in a Common Deep-Sea Sponge (Geodia barretti)

Deep-sea sponges and their microbial symbionts transform various forms of carbon (C) and nitrogen (N) via several metabolic pathways, which, for a large part, are poorly quantified. Previous flux studies on the common deep-sea sponge Geodia barretti consistently revealed net consumption of dissolved organic carbon (DOC) and oxygen (O2) and net release of nitrate (NO3-). Here we present a biogeochemical metabolic network model that, for the first time, quantifies C and N fluxes within the sponge holobiont in a consistent manner, including many poorly constrained metabolic conversions. Using two datasets covering a range of individual G. barretti sizes (10–3,500 ml), we found that the variability in metabolic rates partially resulted from body size as O2 uptake allometrically scales with sponge volume. Our model analysis confirmed that dissolved organic matter (DOM), with an estimated C:N ratio of 7.7 ± 1.4, is the main energy source of G. barretti. DOM is primarily used for aerobic respiration, then for dissimilatory NO3- reduction to ammonium (NH4+) (DNRA), and, lastly, for denitrification. Dissolved organic carbon (DOC) production efficiencies (production/assimilation) were estimated as 24 ± 8% (larger individuals) and 31 ± 9% (smaller individuals), so most DOC was respired to carbon dioxide (CO2), which was released in a net ratio of 0.77–0.81 to O2 consumption. Internally produced NH4+ from cellular excretion and DNRA fueled nitrification. Nitrification-associated chemoautotrophic production contributed 5.1–6.7 ± 3.0% to total sponge production. While overall metabolic patterns were rather independent of sponge size, (volume-)specific rates were lower in larger sponges compared to smaller individuals. Specific biomass production rates were 0.16% day–1 in smaller compared to 0.067% day–1 in larger G. barretti as expected for slow-growing deep-sea organisms. Collectively, our approach shows that metabolic modeling of hard-to-reach, deep-water sponges can be used to predict community-based biogeochemical fluxes and sponge production that will facilitate further investigations on the functional integration and the ecological significance of sponge aggregations in deep-sea ecosystems.

Type and Feasibility of Agribusiness of Kub Chicken Household Scale

The aims of this assessment are to determine the type of KUB chicken agribusiness and feasibility of its business in household scale. The assessment was carried out from November to December 2020 using a survey method. Data were collected by using structured questionnaires to 133 KUB chicken farmers in East Java. Data were analyzed descriptively, using tabulation methods for understanding farming conditions and R/C ratio analysis for knowing economic feasibility. The results showed that there were many types of businesses run by KUB chicken farmers in East Java, namely day old chicks (DOC) production 29%, meat production 29 %, consumption egg production 19%, and others are hatching eggs and pullet productions. Farming population capacity was more than 100 (30.5%), 50-100 chickens (35.9%) and less than 50 chickens (33.6%). The highest business feasibility was in the type of breeding business for DOC production with an R/C ratio of 2.12, and the lowest was in egg production and meat production with R/C ratio of 1.16. It can be concluded that the main type of business that has a high value of business feasibility in the household scale KUB chicken farm in East Java is the nursery to produce DOC.

Controls on the net dissolved organic carbon production in tropical peat

<p>Soil factors such as pH and the presence of polyvalent cations can influence the net production of dissolved organic carbon (DOC). This study aimed to determine the main factors that control net DOC production. The study was conducted at Buatan Village, Siak Indrapura Regency, Riau Province, Indonesia. Soil and water sampling were done every month for a year observation, from July 2018 to June 2019. Soil sampling was carried out to determine the concentration of C-organic acids, pH, N, P, K, Cu, and soil water content (SWC). Peat water sampling was carried out using modified pore water sampling to measure DOC concentration. Groundwater level (GWL) and soil temperature were also observed. Multiple regression analysis was performed to find out the soil and environmental factors controlling the net DOC production. The results showed that the net DOC production fluctuated with seasonal changes and soil pH was a significant controlling factor (<em>P</em> = 0.035) and positively correlated (<em>P</em> = 0.040) to the net DOC production. In addition, N-mineral, PO₄, and Cu were positively correlated with net DOC production (<em>P</em>-value: 0.026; 0.033; and 0.028; respectively) while C-organic acids and SWC were negatively correlated (<em>P</em>-value: 0.033; and 0.020; respectively). There was no correlation between net DOC production with GWL, soil temperature, and K concentration. This finding confirmed that pH was the main factor controlling the net DOC production and reflects DOC contribution to the solution acidity.</p>

Lability of dissolved organic carbon from boreal peatlands: interactions between permafrost thaw, wildfire, and season

Boreal peatlands are major sources of dissolved organic carbon (DOC) to downstream aquatic ecosystems, where it influences carbon cycling and food web structure. Wildfire and permafrost thaw alter peatland vegetation and hydrology and may affect the quantity and chemical composition of exported DOC. We studied the influence of wildfire and thaw on microbial and photochemical lability of near-surface porewater DOC, assessed through 7 d incubations. We carried out these incubations in spring, summer, and fall but only found differences in spring when DOC biodegradability (% loss during dark incubations) increased with lower DOC aromaticity and C/N ratios. During spring, the most labile DOC was found in recently formed thermokarst bogs along collapsing peat plateau edges (25% loss), which was greater than in mature sections of thermokarst bogs (3%), and peat plateaus with intact permafrost (9%). Increased DOC lability following thaw was likely linked to high DOC production and turnover associated with productive hydrophilic Sphagnum mosses and sedges, rather than thawed permafrost peat. A wildfire (3 yr prior) reduced DOC biodegradability in both peat plateaus (4%) and rapidly collapsing peat plateau edges (14%). Biodegradability of DOC in summer and fall was low across all sites; 2% and 4%, respectively. Photodegradation was shown to potentially contribute significantly to downstream DOC degradation but did not vary across peatland sites. We show that disturbances such as permafrost thaw and wildfire have the potential to affect downstream carbon cycling, particularly as the largest influences were found in spring when peatlands are well connected to downstream aquatic ecosystems.

Studying the effects of droughts and heavy rain events on DOC in Scot pine in Belgium

&lt;p&gt;&lt;strong&gt;Studying the effects of droughts and heavy rain events on DOC in Scot pine in Belgium&lt;/strong&gt;&lt;/p&gt;&lt;p&gt;Cristina Ariza-Carricondo(1,2), Marilyn Roland(1), Bert Gielen(1), Eric Struyf(1), Caroline Vincke(2) and Ivan Janssens(1).&lt;/p&gt;&lt;p&gt;(1) PLECO, University of Antwerp, Belgium. (2) Faculty of Bioscience Engineering &amp; Earth and Life Institute, University of Louvain-la-Neuve, Louvain-la-Neuve, Belgium.&lt;/p&gt;&lt;p&gt;Climate extremes, including extreme rain events, are becoming more frequent and more extreme, and affect the carbon cycle of ecosystems. Very little is known about how Dissolved Organic Carbon (DOC) production and leaching are affected by such precipitation extremes while the relation between dissolved and gaseous exports of carbon under different precipitation regimes remains unexplored.&lt;/p&gt;&lt;p&gt;Hydrological conditions are the main driver of DOC leaching and alterations in precipitation patterns may cause large changes in the carbon balance of forests. To test the effects of precipitation extremes on DOC, we designed a manipulation experiment in a Scots pine forest in Belgium.&lt;/p&gt;&lt;p&gt;One of the challenges to estimate DOC export is the quantification of water drainage flow. In this study we used self-designed Zero Tension Lysimeters (ZTL) to capture leaching water and analyze its DOC-concentrations as well as other elements along profiles in the soil (up to 75cm depth), to study how DOC moves under different precipitation regimes. Different manipulation experiments were performed where we modified the precipitation regime simulating heavy rain events after different droughts as well as experiments where we modified the precipitation intensity over time. Leached water was collected at different depths at monthly intervals after natural rain events as well as after irrigations.&lt;/p&gt;&lt;p&gt;Preliminary results showed that drainage water transported DOC differently through the soil when different amounts of water were added. Furthermore, more frequent small rain events appear to favor the production of DOC as compared to less frequent high intensity rain events, while DOC production ceases during droughts.&lt;/p&gt;

Temperature controls production but hydrology regulates export of dissolved organic carbon at the catchment scale

Lateral carbon flux through river networks is an important and poorly understood component of the global carbon budget. This work investigates how temperature and hydrology control the production and export of dissolved organic carbon (DOC) in the Susquehanna Shale Hills Critical Zone Observatory in Pennsylvania, USA. Using field measurements of daily stream discharge, evapotranspiration, and stream DOC concentration, we calibrated the catchment-scale biogeochemical reactive transport model BioRT-Flux-PIHM (Biogeochemical Reactive Transport–Flux–Penn State Integrated Hydrologic Model, BFP), which met the satisfactory standard of a Nash–Sutcliffe efficiency (NSE) value greater than 0.5. We used the calibrated model to estimate and compare the daily DOC production rates (Rp; the sum of the local DOC production rates in individual grid cells) and export rate (Re; the product of the concentration and discharge at the stream outlet, or load). Results showed that daily Rp varied by less than an order of magnitude, primarily depending on seasonal temperature. In contrast, daily Re varied by more than 3 orders of magnitude and was strongly associated with variation in discharge and hydrological connectivity. In summer, high temperature and evapotranspiration dried and disconnected hillslopes from the stream, driving Rp to its maximum but Re to its minimum. During this period, the stream only exported DOC from the organic-poor groundwater and from organic-rich soil water in the swales bordering the stream. The DOC produced accumulated in hillslopes and was later flushed out during the wet and cold period (winter and spring) when Re peaked as the stream reconnected with uphill and Rp reached its minimum. The model reproduced the observed concentration–discharge (C–Q) relationship characterized by an unusual flushing–dilution pattern with maximum concentrations at intermediate discharge, indicating three end-members of source waters. A sensitivity analysis indicated that this nonlinearity was caused by shifts in the relative contribution of different source waters to the stream under different flow conditions. At low discharge, stream water reflected the chemistry of organic-poor groundwater; at intermediate discharge, stream water was dominated by the organic-rich soil water from swales; at high discharge, the stream reflected uphill soil water with an intermediate DOC concentration. This pattern persisted regardless of the DOC production rate as long as the contribution of deeper groundwater flow remained low (<18 % of the streamflow). When groundwater flow increased above 18 %, comparable amounts of groundwater and swale soil water mixed in the stream and masked the high DOC concentration from swales. In that case, the C–Q patterns switched to a flushing-only pattern with increasing DOC concentration at high discharge. These results depict a conceptual model that the catchment serves as a producer and storage reservoir for DOC under hot and dry conditions and transitions into a DOC exporter under wet and cold conditions. This study also illustrates how different controls on DOC production and export – temperature and hydrological flow paths, respectively – can create temporal asynchrony at the catchment scale. Future warming and increasing hydrological extremes could accentuate this asynchrony, with DOC production occurring primarily during dry periods and lateral export of DOC dominating in major storm events.

Temperature controls production but hydrology controls export of dissolved organic carbon at the catchment scale

Lateral carbon flux through river networks is an important and poorly-understood component of the global carbon budget. This work investigates how temperature and hydrology control the production and export of dissolved organic carbon (DOC) in the Susquehanna Shale Hills Critical Zone Observatory in Pennsylvania, USA. We applied the catchment-scale hydro-biogeochemical reactive transport model BioRT-Flux-PIHM to simulate the DOC dynamics. We estimated the daily DOC production rate (Rp; the sum of local DOC production rates in individual modeling grid cell) and the daily DOC export rate (Re; the product of concentration and discharge at the stream outlet) to downstream ecosystems. Simulations showed that Rp varied by less than an order of magnitude and primarily hinged on seasonal temperature change. In contrast, Re varied by more than three orders of magnitude with a strong dependence on discharge and hydrological connectivity. During summer, high temperatures led to high atmospheric water demand (and evapotranspiration) that dried and disconnected hillslope to stream. Rp reached its maximum but Re was at its minimum. The stream only exported DOC from the organic-poor groundwater and from soil water in the narrow organic-rich swales with enriched DOC such that DOC accumulated in the catchment. During the wet period (winter and spring), Rp reached its minimum but Re peaked because the stream was re-connected to a greater uphill area, flushing out the stored DOC. The model reproduced the observed concentration discharge (C–Q) relationship characterized by a flushing-dilution pattern with a rise in concentrations to a maximum (flushing) at a threshold discharge and then followed a general dilution with concentrations decreasing with discharge. This pattern was explained by the comparable contribution of organic-poor deeper groundwater and soil water from organic-rich swales at the minimum flow, maximized percentage contribution of soil water from organic-rich swales at the low flow regime, and increased contribution of uphill soil water interflow from uphill with less DOC at the high flow regime. This pattern persisted regardless of DOC production rate as long as the contribution of deeper groundwater flow remained low ( 18 %, the flushing-dilution C–Q pattern shifted towards a flushing-only pattern with DOC concentrations increasing with discharge. This study illustrates the temporal asynchrony of DOC production, mostly controlled by temperature, and DOC export, primarily governed by hydrological flow paths at the catchment scale. The occurrence of warmer and more extreme hydrological events in the future could accentuate this asynchrony, with major lateral export of DOC dominated by a few major storm events whereas DOC is produced and stored in the catchment in the prolonged drought periods.

Decoupling of net community production and particulate organic carbon dynamics in near shore surface ocean waters

We report results from two Lagrangian surveys off the coast of Oregon, using continuous ship-board sensors to estimate mixed layer net community production (NCP) from diel cycles in biological oxygen saturation (∆O2 / Ar) and optically-derived estimates of particulate organic carbon (POC) and phytoplankton carbon (Cph). The first drifter survey, conducted in a nearshore upwelling zone during the development of a microplankton bloom, exhibited significant differences in NCP derived from ∆O2 / Ar and POC diel cycles, suggesting the presence of large POC losses from the mixed layer. At this site, we utilized the discrepancy between NCPO2 / Ar and NCPPOC, along with additional constraints derived from mixed layer nutrient inventories and surface water excess nitrous oxide (N2O), to estimate particle export, vertical mixing fluxes and DOC production. We estimate that export, vertical mixing and DOC production account for 13–45 %, 24–38 % and 25–49 % of the daily NCP discrepancy, respectively. In contrast, the second drifter survey occurred in more oligotrophic offshore waters, where NCP derived from ∆O2 / Ar and POC measurements were more closely coupled, suggesting a tighter relationship between production and community respiration. These results support the use of diel POC measurements to accurately estimate NCP in lower productivity waters with limited vertical carbon export. Although diel POC measurements may underestimate NCP in higher productivity waters, our results highlight the potential utility of coupled O2 and optical measurements to estimate the fate of POC in such regions.

The effect of drought on dissolved organic carbon (DOC) release from peatland soil and vegetation sources

Drought conditions are expected to increase in frequency and severity as the climate changes, representing a threat to carbon sequestered in peat soils. Downstream water treatment works are also at risk of regulatory compliance failures and higher treatment costs due to the increase in riverine dissolved organic carbon (DOC) often observed after droughts. More frequent droughts may also shift dominant vegetation in peatlands from Sphagnum moss to more drought-tolerant species. This paper examines the impact of drought on the production and treatability of DOC from four vegetation litters (Calluna vulgaris, Juncus effusus, Molinia caerulea and Sphagnum spp.) and a peat soil. We found that mild droughts caused a 39.6 % increase in DOC production from peat and that peat DOC that had been exposed to oxygen was harder to remove by conventional water treatment processes (coagulation/flocculation). Drought had no effect on the amount of DOC production from vegetation litters; however large variation was observed between typical peatland species (Sphagnum and Calluna) and drought-tolerant grassland species (Juncus and Molinia), with the latter producing more DOC per unit weight. This would therefore suggest the increase in riverine DOC often observed post-drought is due entirely to soil microbial processes and DOC solubility rather than litter layer effects. Long-term shifts in species diversity may, therefore, be the most important impact of drought on litter layer DOC flux, whereas pulses related to drought may be observed in peat soils and are likely to become more common in the future. These results provide evidence in support of catchment management which increases the resilience of peat soils to drought, such as ditch blocking to raise water tables.