Flow Intermittency Affects Leaf Decomposition and Benthic Consumer Communities of Alpine Streams: A Case Study along the Po River

Streams and rivers are becoming increasingly intermittent in Alpine regions due to the global climate change and related increases of local water abstractions, making it fundamental to investigate the occurrence of supraseasonal drying events and their correlated effects. We aimed to investigate leaf litter decomposition, the C:N ratio of the litter, and changes in associated macroinvertebrate communities in three reaches of the Po River: One upstream, consistently perennial, a perennial mid-reach with high hydrological variability, and an intermittent downstream reach. We placed leaf litter bags of two leaf types—chestnut and oak; both showed comparable decomposition rates, but the remaining litter mass was different and was attributed to the C:N ratio and palatability. Furthermore, (1) in perennial reaches, leaf litter decomposed faster than in the intermittent ones; (2) in intermittent reaches, the C:N ratio showed a decreasing trend in both leaf types, indicating that drying affected the nitrogen consumption, therefore the conditioning phase; (3) associated macroinvertebrate communities were richer and more stable in perennial reaches, where a higher richness and abundance of EPT taxa and shredders was observed. Our results suggest that the variations in the hydrology of mountain streams caused by global climate change could significantly impact on functional processes and biodiversity of benthic communities.

Assessing the potential of a Trichoderma-based compost activator to hasten the decomposition of incorporated rice straw

The potential for a Trichoderma-based compost activator was tested for in-situ rice straw decomposition, under both laboratory and field conditions. Inoculation of Trichoderma caused a 50% reduction in the indigenous fungal population after 2 weeks of incubation for both laboratory and field experiments. However, the Trichoderma population declined during the latter part of the incubation. Despite the significant reduction in fungal population during the first 2 weeks of incubation, inoculated samples were found to have higher indigenous and total fungal population at the end of the experiments with as much as a 300% increase in the laboratory experiment and 50% during day-21 and day-28 samplings in the field experiment. The laboratory incubation experiment revealed that inoculated samples released an average of 16% higher amounts of CO2 compared to uninoculated straw in sterile soil samples. Unsterile soil inoculated with Trichoderma released the highest amount of CO2 in the laboratory experiment. In the field experiment, improved decomposition was observed in samples inoculated with Trichoderma and placed below ground (WTBG). From the initial value of around 35%, the C content in WTBG was down to 28.63% after 42 days of incubation and was the lowest among treatments. This is significantly lower compared with NTBG (No Trichoderma placed below ground, 31.1% C), WTSS (With Trichoderma placed on soil surface, 33.83% C), and NTSS (No Trichoderma placed on soil surface, 34.30% carbon). The WTBG treatment also had the highest N content of 1.1%. The C:N ratio of WTBG was only 26.27, 39.51% lower than the C:N ratio of NTBG, which is 43.43. These results prove that the Trichoderma-based inoculant has the potential to hasten the decomposition of incorporated rice straw.

Comparative Review of Aerobic and Anaerobic Composting for the Reduction of Organic Waste

Composting is a self-heating, aerobic, bio-decomposition process of organic waste that has advantages over other disposal strategies since it reduces waste volume by 40-50% and kills pathogens by the heat generated during the thermophilic phase. This process uses organic waste (food scraps, grass chipping, etc.), water, soil (for added microbes) and either incorporation of air by turning the compost (aerobic) or lack of air within the compost (anaerobic). This study is designed to comparatively assess aerobic and anaerobic composting mechanisms on the productivity rate and analyse the different variables influencing the process. Based on the results obtained the time taken to completely compost the organic materials might not always be the same, because composting time is dependent on the percentage of microorganisms, water content, temperature and C:N ratio present in the pile at the said time along with the amount of material to be composted. Finally, this study will not only help farmers but also the general public in choosing a cost-effective and environmentally friendly way of reducing organic waste from landfills and reduction of greenhouse gases in the ozone layer.

Effects of Buried Wood on the Development of Populus tremuloides on Various Oil Sands Reclamation Soils

Buried wood is an important but understudied component of reclamation soils. We examined the impacts of buried wood amounts and species on the growth of the common reclamation tree species trembling aspen (Populus tremuloides). In a greenhouse study, aspen seedlings were planted into four soil types, upland derived fine forest floor-mineral mix (fFFMM), coarse forest floor-mineral mix (cFFMM), and lowland derived peat and peat-mineral mix (PMM), that were mixed with either aspen or pine wood shavings at four concentrations (0%, 10%, 20% and 50% of total volume). Height and diameter growth, chlorophyll concentration, and leaf and stem biomass were measured. Soil nutrients and chemical properties were obtained from a parallel study. Buried wood primarily represents an input of carbon to the soil, increasing the C:N ratio, reducing the soil available nitrogen and potentially reducing plant growth. Soil type had the largest impact on aspen growth with fFFMM = peat > PMM > cFFMM. Buried wood type, i.e., aspen or pine, did not have an impact on aspen development, but the amount of buried wood did. In particular, there was an interaction between wood amount and soil type with a large reduction in aspen growth with wood additions of 10% and above on the more productive soils, but no reduction on the less productive soils.

Chemical Profiling, Bioactivity Evaluation and the Discovery of a Novel Biopigment Produced by Penicillium purpurogenum CBS 113139

Biobased pigments are environmentally friendly alternatives to synthetic variants with an increased market demand. Production of pigments via fermentation is a promising process, yet optimization of the production yield and rate is crucial. Herein, we evaluated the potential of Penicillium purpurogenum to produce biobased pigments. Optimum sugar concentration was 30 g/L and optimum C:N ratio was 36:1 resulting in the production of 4.1–4.5 AU (namely Pigment Complex A). Supplementation with ammonium nitrate resulted in the production of 4.1–4.9 AU (namely Pigment Complex B). Pigments showed excellent pH stability. The major biopigments in Pigment Complex A were N-threonyl-rubropunctamin or the acid form of PP-R (red pigment), N-GABA-PP-V (violet pigment), PP-O (orange pigment) and monascorubrin. In Pigment Complex B, a novel biopigment annotated as N-GLA-PP-V was identified. Its basic structure contains a polyketide azaphilone with the same carboxyl-monascorubramine base structure as PP-V (violet pigment) and γ-carboxyglutamic acid (GLA). The pigments were not cytotoxic up to 250 μg/mL.

Ciprofloxacin Causes the Greatest Bacterial Community Variation in Swine Manure Composting

In this study, the influence of ciprofloxacin, chlorotetracycline, lincomycin, and sulfamethoxazole on the composition of the bacterial community structure was studied during aerobic composting with swine manure. Firmicutes (26.67%) and Chloroflexi (23.33%) were the most widely distributed phyla. Under all antibiotic treatments, the relative abundances of Bacillaceae, Streptosporangiaceae, Limnochordaceae, and Peptostreptococcaceae increased during the composting process. Moreover, norank_SBR1031, Planococcaceae, Thermomonosporaceae, Peptostreptococcaceae, Erysipelotrichaceae, Limnochordaceae, and Clostridiaceae_1 were the families showing the most significant differences across all treatments (p < 0.05). Principal co-ordinates analysis indicated that the family composition in the ciprofloxacin treatment significantly differed from the other treatments. The presence of ciprofloxacin increased both the abundance and diversity of the bacterial community (the Chao index changed from 588.44 to 680.17, and the Shannon index changed from 3.41 to 4.06) in the end of composting. Crocinitomicaceae dominated (relative abundance of 79.10%) among the unique families in the ciprofloxacin treatment. Network analysis indicated that ciprofloxacin altered the synergistic or competitive relationships between different families (norank_SBR1031 and Microscillaceae), leading to different bacterial community composition compared with other treatments. Further, a structural equation model showed that the C:N ratio was significantly negatively correlated with the bacterial community (λ = −0.869, p < 0.01), whereas pH showed a direct, significant positive relationship with the bacterial community (λ = 0.701, p < 0.01), especially in ciprofloxacin treatment. Overall, ciprofloxacin significantly influenced the physical and chemical properties of composting, altered the bacterial community structure. These findings have important implications for a better understanding of the effects of antibiotic types on bacterial community structure and the involved mechanisms during swine manure composting.

Nitrogen Fertiliser Immobilisation and Uptake in the Rhizospheres of Wheat and Canola

Immobilisation of fertiliser nitrogen (N) by soil microorganisms can reduce N availability to crops, decreasing growth and yield. To date, few studies have focussed on the effect of different plant species on immobilisation of fertiliser N. Canola (Brassica napus) is known to influence the soil microbiome and increase mineral N in soil for future crops compared with cereals. We tested the hypothesis that canola can reduce immobilisation of fertiliser N by influencing the composition of the rhizosphere microbiome. To investigate this, we conducted a glasshouse soil column experiment comparing N fertiliser uptake between canola and wheat (Triticum aestivium) and partitioning of fertiliser N between plants and microorganisms. Plants were grown in soil to which high C:N ratio wheat residues and 15N-labelled urea fertiliser were applied. There was no difference between wheat and canola in fertiliser N uptake despite differences in fungal community composition and the carbon metabolising enzyme alpha-glucosidase in the rhizosphere. Canola obtained more soil-derived N than wheat. There was no significant difference in the rhizosphere bacterial communities present between wheat and canola and unplanted controls. Our results highlight the capacity of canola to increase mineralisation of soil N compared with wheat although the study could not describe the microbial community which facilitated this increase.

Soil organic carbon stabilization mechanisms and temperature sensitivity in old terraced soils

Being the most common human-created landforms, terrace construction has resulted in an extensive perturbation of the land surface. However, our mechanistic understanding of soil organic carbon (SOC) (de-)stabilization mechanisms and the persistence of SOC stored in terraced soils is far from complete. Here we explored the factors controlling SOC stability and the temperature sensitivity (Q10) of abandoned prehistoric agricultural terrace soils in NE England using soil fractionation and temperature-sensitive incubation combined with terrace soil burial-age measurements. Results showed that although buried terrace soils contained 1.7 times more unprotected SOC (i.e., coarse particulate organic carbon) than non-terraced soils at comparable soil depths, a significantly lower potential soil respiration was observed relative to a control (non-terraced) profile. This suggests that the burial of former topsoil due to terracing provided a mechanism for stabilizing SOC. Furthermore, we observed a shift in SOC fraction composition from particulate organic C towards mineral-protected C with increasing burial age. This clear shift to more processed recalcitrant SOC with soil burial age also contributes to SOC stability in terraced soils. Temperature sensitivity incubations revealed that the dominant controls on Q10 depend on the terrace soil burial age. At relatively younger ages of soil burial, the reduction in substrate availability due to SOC mineral protection with aging attenuates the intrinsic Q10 of SOC decomposition. However, as terrace soil becomes older, SOC stocks in deep buried horizons are characterized by a higher temperature sensitivity, potentially resulting from the poor SOC quality (i.e., soil C:N ratio). In conclusion, terracing in our study site has stabilized SOC as a result of soil burial during terrace construction. The depth–age patterns of Q10 and SOC fraction composition of terraced soils observed in our study site differ from those seen in non-terraced soils, and this has implications when assessing the effects of climate warming and terrace abandonment on the terrestrial C cycle.

Physiological and Morphometric Response of Forage Grass Species and Their Biomass Distribution Depending on the Term and Frequency of Water Deficiency

Periodic and repeated water scarcity has become an increasing concern on grasslands, causing not only to a reduction in productivity but also negative alterations in the carbon balance. The objective of this work was to comprehensively investigate some physiological performance traits of forage grasses, their roots morphometric features and distribution of biomass under simulated water deficit applied in different terms over a period of study. Plants were exposed to water shortage for 21 days, and then grown in optimal substrate moisture conditions. The gas exchange parameters and the main traits of root system architecture of three grass forage species and their cultivars were analyzed: Festulolium braunii (Richt.) A. Camus, cvs. Felopa and Sulino, Lolium perenne L., cvs. Bajka and Gagat and Festuca arundinacea Schreb. cvs. Odys and Rahela. Rapid decrease in the values of parameters related to the gas exchange process in grasses in the following days of water shortage was noticed. Water use efficiency (WUE) value was low in drought conditions due to increased transpiration of plants and was associated with a low C:N ratio in shoots. No obvious, positive effect of previously experienced drought stress on survival of tested grass species after another stress was observed. Cutting of plants after drought period most probably underlied the lack of memory and also additional factor weakened plant regrowth. When the drought was applied for the second time in spring during intensive plant growth, higher biomass allocation to the roots was observed. It was associated with the reduction of plant dry biomass, a decrease of carbon accumulation and the C:N ratio in the shoots. Due to the drought applied for the second time in summer, some biometric features of the roots were strongly and positively correlated with WUE, which is an important feature from the point of view of yield optimization and moisture use by plants.