Cyclic Hydroxylamines as Monitors of Peroxynitrite and Superoxide-Revisited

There is a considerable need for methods that allow quantitative determination in vitro and in vivo of transient oxidative species such as peroxynitrite (ONOOH/ONOO–) and superoxide (HO2•/O2•−). Cyclic hydroxylamines, which upon oxidation yield their respective stable nitroxide radicals, have been suggested as spin probes of peroxynitrite and superoxide. The present study investigated this approach by following the kinetics of peroxynitrite decay in the absence and presence of various 5-membered and 6-membered ring hydroxylamines, and comparing the yield of their respective nitroxides using electron paramagnetic spectroscopy. The results demonstrate that hydroxylamines do not react directly with peroxynitrite, but are oxidized to their respective nitroxides by the radicals formed during peroxynitrite self-decomposition, namely •OH and •NO2. The accumulated nitroxides are far below their expected yield, had the hydroxylamines fully scavenged all these radicals, due to multiple competing reactions of the oxidized forms of the hydroxylamines with •NO2 and ONOO–. Therefore, cyclic hydroxylamines cannot be used for quantitative assay of peroxynitrite in vitro. The situation is even more complex in vivo where •OH and •NO2 are formed also via other oxidizing reactions systems. The present study also compared the yield of accumulated nitroxides under constant flux of superoxide in the presence of various cyclic hydroxylamines. It is demonstrated that certain 5-membered ring hydroxylamines, which their respective nitroxides are poor SOD-mimics, might be considered as stoichiometric monitors of superoxide in vitro at highest possible concentrations and pH.

A New Cu(II) Complex of PAMAM Dendrimer Modified with 1,8-Naphthalimide: Antibacterial and Anticancer Activity

A new fluorescent PAMAM copper complex ([Cu2(D)(NO3)4]) has been synthesized and identified. The formation of the complex has been investigated by fluorescence spectroscopy which revealed two copper ions to be bound to the dendrimer ligand. That has also been confirmed upon subjecting the solid copper complex to electron paramagnetic spectroscopy. The antimicrobial activity of the copper complex against Gram-negative bacterium Pseudomonas aeruginosa in light and the dark has been studied. The results demonstrate an increase in its activity when irradiated with daylight. This activity of the copper complex is retained even after being loaded onto a cotton cloth. The antitumor activity of the copper complex and dendrimer ligand against triple-negative breast cancer MDA-MB-231 cells has been investigated as well.

Lysophosphatidylcholine induces oxidative stress in human endothelial cells via NOX5 activation - implications in atherosclerosis

Objective: The mechanisms involved in NOX5 activation in atherosclerotic processes are not completely understood. This study tested the hypothesis that lysophosphatidylcholine (LPC), a proatherogenic component of oxLDL, induces endothelial calcium influx, which drives NOX5-dependent reactive oxygen species (ROS) production, oxidative stress, and endothelial cell dysfunction. Approach: Human aortic endothelial cells (HAEC) were stimulated with LPC (10-5 M, for different time points). Pharmacological inhibition of NOX5 (Melittin, 10-7 M) and NOX5 gene silencing (siRNA) were used to determine the role of NOX5-dependent ROS production in endothelial oxidative stress induced by LPC. ROS production was determined by lucigenin assay and electron paramagnetic spectroscopy (EPR), calcium transients by Fluo4 fluorimetry, and NOX5 activity and protein expression by pharmacological assays and immunoblotting, respectively. Results: LPC increased ROS generation in endothelial cells at short (15 min) and long (4 h) stimulation times. LPC-induced ROS was abolished by a selective NOX5 inhibitor and by NOX5 siRNA. NOX1/4 dual inhibition and selective NOX1 inhibition only decreased ROS generation at 4 h. LPC increased HAEC intracellular calcium, important for NOX5 activation, and this was blocked by nifedipine and thapsigargin. Bapta-AM, selective Ca2+ chelator, prevented LPC-induced ROS production. NOX5 knockdown decreased LPC-induced ICAM-1 mRNA expression and monocyte adhesion to endothelial cells. Conclusion: These results suggest that NOX5, by mechanisms linked to increased intracellular calcium, is key to early LPC-induced endothelial oxidative stress and pro-inflammatory processes. Since these are essential events in the formation and progression of atherosclerotic lesions, this study highlights an important role for NOX5 in atherosclerosis.

Comparison of the Effect of the Amino Acids on Spontaneous Formation and Transformation of Calcium Phosphates

Understanding the effect that specific amino acids (AA) exert on calcium phosphate (CaPs) formation is proposed as a way of providing deeper insight into CaPs’ biomineralization and enabling the design of tailored-made additives for the synthesis of functional materials. Despite a number of investigations, the role of specific AA is still unclear, mostly because markedly different experimental conditions have been employed in different studies. The aim of this paper was to compare the influence of different classes of amino acids, charged (aspartic acid, Asp and lysine, Lys), polar (asparagine, Asn and serine, Ser) and non-polar (phenylalanine, Phe) on CaPs formation and transformation in conditions similar to physiological conditions. The precipitation process was followed potentiometrically, while Fourier transform infrared spectroscopy, powder X-ray diffraction, electron paramagnetic spectroscopy (EPR), scanning and transmission electron microscopy were used for the characterization of precipitates. Except for Phe, all investigated AAs inhibited amorphous calcium phosphate (ACP) transformation, with Ser being the most efficient inhibitor. In all systems, ACP transformed in calcium-deficient hydroxyapatite (CaDHA). However, the size of crystalline domains was affected, as well as CaDHA morphology. In EPR spectra, the contribution of different radical species with different proportions in diverse surroundings, depending on the type of AA present, was observed. The obtained results are of interest for the preparation of functionalized CaPs’, as well as for the understanding of their formation in vivo.

Recent Understanding of Low-Temperature Copper Dynamics in Cu-Chabazite NH3-SCR Catalysts

Dynamic motion of NH3-solvated Cu sites in Cu-chabazite (Cu-CHA) zeolites, which are the most promising and state-of-the-art catalysts for ammonia-assisted selective reduction of NOx (NH3-SCR) in the aftertreatment of diesel exhausts, represents a unique phenomenon linking heterogeneous and homogeneous catalysis. This review first summarizes recent advances in the theoretical understanding of such low-temperature Cu dynamics. Specifically, evidence of both intra-cage and inter-cage Cu motions, given by ab initio molecular dynamics (AIMD) or metadynamics simulations, will be highlighted. Then, we will show how, among others, synchrotron-based X-ray spectroscopy, vibrational and optical spectroscopy (diffuse reflection infrared Fourier transform spectroscopy (DRIFTS) and diffuse reflection ultraviolet-visible spectroscopy (DRUVS)), electron paramagnetic spectroscopy (EPR), and impedance spectroscopy (IS) can be combined and complement each other to follow the evolution of coordinative environment and the local structure of Cu centers during low-temperature NH3-SCR reactions. Furthermore, the essential role of Cu dynamics in the tuning of low-temperature Cu redox, in the preparation of highly dispersed Cu-CHA catalysts by solid-state ion exchange method, and in the direct monitoring of NH3 storage and conversion will be presented. Based on the achieved mechanistic insights, we will discuss briefly the new perspectives in manipulating Cu dynamics to improve low-temperature NH3-SCR efficiency as well as in the understanding of other important reactions, such as selective methane-to-methanol oxidation and ethene dimerization, catalyzed by metal ion-exchanged zeolites.

Nickel and GTP Modulate Helicobacter pylori UreG Structural Flexibility

UreG is a P-loop GTP hydrolase involved in the maturation of nickel-containing urease, an essential enzyme found in plants, fungi, bacteria, and archaea. This protein couples the hydrolysis of GTP to the delivery of Ni(II) into the active site of apo-urease, interacting with other urease chaperones in a multi-protein complex necessary for enzyme activation. Whereas the conformation of Helicobacter pylori (Hp) UreG was solved by crystallography when it is in complex with two other chaperones, in solution the protein was found in a disordered and flexible form, defining it as an intrinsically disordered enzyme and indicating that the well-folded structure found in the crystal state does not fully reflect the behavior of the protein in solution. Here, isothermal titration calorimetry and site-directed spin labeling coupled to electron paramagnetic spectroscopy were successfully combined to investigate HpUreG structural dynamics in solution and the effect of Ni(II) and GTP on protein mobility. The results demonstrate that, although the protein maintains a flexible behavior in the metal and nucleotide bound forms, concomitant addition of Ni(II) and GTP exerts a structural change through the crosstalk of different protein regions.

The Electron Paramagnetic Resonance in the Study of Tissues Specimens

The Electron Paramagnetic Spectroscopy (EPR) is the most direct and powerful method for the detection and identification of free radicals and other species with unpaired electrons. Statistics disorders are a common gynaecological disorder occurring in women. The condition afflicts around 15% of women to the extent of impairing the quality of living. According to scientific reports as many as 50% of women experiencing problems related to genital statistics disorders. The aim of this work was to investigate tissue taken from women with genital statistics disorders using the Electron Paramagnetic Resonance method. The studies on the tissue of women is one of the first studies in this area. In this work we observed a close relationship between the observed EPR signal and the consumption of omega 3 acids.

A new approach to marine fish otoliths study: electron paramagnetic resonance

The biocrystallization process and the prescence of manganese in sagitta otoliths is described for the first time via electron paramagnetic spectroscopy. Spectra of Mn2+ are applied to verify inter-species differences in 12 Sciaenidae species and geographic variations among three stocks of banded croaker Paralonchurus brasiliensis and rake stardrum Stellifer rastrifer. Similar spectra shape and zero-field splitting D (22.4 mT) indicated that the biocrystallization process is the same for all fish species, at any stage of development and under different environmental conditions, corresponding to Mn2+ in the aragonite (CaCO3). Inter-species differences in Mn2+ concentration were detected regarding the otolith shape. Elongated otoliths have higher manganese concentrations compared to rounded otoliths. Geographic variations among stocks of P. brasiliensis and S. rastrifer could be detected. Fish stocks under riverine influence have less Mn2+ concentration than ones under marine influence. Manganese detection via electron paramagnetic spectroscopy is a non-destructive approach that can be useful in fish stocks studies.

An Engineered Cytochromeb6c1 Complex with a Split Cytochrome b Is Able To Support Photosynthetic Growth of Rhodobacter capsulatus

ABSTRACT The ubihydroquinone-cytochrome c oxidoreductase (or the cytochrome bc 1 complex) fromRhodobacter capsulatus is composed of the Fe-S protein, cytochrome b, and cytochromec 1 subunits encoded bypetA(fbcF), petB(fbcB), and petC(fbcC) genes organized as an operon. In the work reported here, petB(fbcB) was split genetically into two cistrons, petB6 andpetBIV, which encoded two polypeptides corresponding to the four amino-terminal and four carboxyl-terminal transmembrane helices of cytochrome b, respectively. These polypeptides resembled the cytochromeb 6 and su IV subunits of chloroplast cytochromeb 6 f complexes, and together with the unmodified subunits of the cytochromebc 1 complex, they formed a novel enzyme, named cytochrome b 6 c 1complex. This membrane-bound multisubunit complex was functional, and despite its smaller amount, it was able to support the photosynthetic growth of R. capsulatus. Upon further mutagenesis, a mutant overproducing it, due to a C-to-T transition at the second base of the second codon of petBIV, was obtained. Biochemical analyses, including electron paramagnetic spectroscopy, with this mutant revealed that the properties of the cytochromeb 6 c 1 complex were similar to those of the cytochrome bc 1 complex. In particular, it was highly sensitive to inhibitors of the cytochrome bc 1 complex, including antimycin A, and the redox properties of its b- and c-type heme prosthetic groups were unchanged. However, the optical absorption spectrum of its cytochrome b L heme was modified in a way reminiscent of that of a cytochromeb 6 f complex. Based on the work described here and that with Rhodobacter sphaeroides (R. Kuras, M. Guergova-Kuras, and A. R. Crofts, Biochemistry 37:16280–16288, 1998), it appears that neither the inhibitor resistance nor the redox potential differences observed between the bacterial (or mitochondrial) cytochromebc 1 complexes and the chloroplast cytochromeb 6 f complexes are direct consequences of splitting cytochrome b into two separate polypeptides. The overall findings also illustrate the possible evolutionary relationships among various cytochrome bcoxidoreductases.