scholarly journals Spatial turnover of multiple ecosystem functions is more associated with plant than soil microbial β‐diversity

Ecosphere ◽  
2021 ◽  
Vol 12 (7) ◽  
Author(s):  
Xin Jing ◽  
Case M. Prager ◽  
Elizabeth T. Borer ◽  
Nicholas J. Gotelli ◽  
Daniel S. Gruner ◽  
...  
Keyword(s):  
Ecosystem Functions ◽  
Soil Microbial ◽  
Β Diversity ◽  
Spatial Turnover

scholarly journals Biotic homogenization can decrease landscape-scale forest multifunctionality

2016 ◽  
Vol 113 (13) ◽  
pp. 3557-3562 ◽  
Author(s):  
Fons van der Plas ◽  
Pete Manning ◽  
Santiago Soliveres ◽  
Eric Allan ◽  
Michael Scherer-Lorenzen ◽  
...  
Keyword(s):  
Large Scale ◽  
Biodiversity Loss ◽  
Landscape Scale ◽  
Biotic Homogenization ◽  
Ecosystem Functions ◽  
Negative Consequences ◽  
Β Diversity ◽  
Spatial Turnover ◽  
Α Diversity ◽  
Ecosystem Multifunctionality

Many experiments have shown that local biodiversity loss impairs the ability of ecosystems to maintain multiple ecosystem functions at high levels (multifunctionality). In contrast, the role of biodiversity in driving ecosystem multifunctionality at landscape scales remains unresolved. We used a comprehensive pan-European dataset, including 16 ecosystem functions measured in 209 forest plots across six European countries, and performed simulations to investigate how local plot-scale richness of tree species (α-diversity) and their turnover between plots (β-diversity) are related to landscape-scale multifunctionality. After accounting for variation in environmental conditions, we found that relationships between α-diversity and landscape-scale multifunctionality varied from positive to negative depending on the multifunctionality metric used. In contrast, when significant, relationships between β-diversity and landscape-scale multifunctionality were always positive, because a high spatial turnover in species composition was closely related to a high spatial turnover in functions that were supported at high levels. Our findings have major implications for forest management and indicate that biotic homogenization can have previously unrecognized and negative consequences for large-scale ecosystem multifunctionality.

scholarly journals Soil microbial diversity–biomass relationships are driven by soil carbon content across global biomes

2021 ◽  
Author(s):  
Felipe Bastida ◽  
David J. Eldridge ◽  
Carlos García ◽  
G. Kenny Png ◽  
Richard D. Bardgett ◽  
...  
Keyword(s):  
Microbial Diversity ◽  
Soil Carbon ◽  
Soil Microbial Communities ◽  
Ecosystem Functions ◽  
Arid Environments ◽  
Soil Microbial Diversity ◽  
Soil Biodiversity ◽  
Soil C ◽  
Soil Microbial ◽  
Biomass Ratio

AbstractThe relationship between biodiversity and biomass has been a long standing debate in ecology. Soil biodiversity and biomass are essential drivers of ecosystem functions. However, unlike plant communities, little is known about how the diversity and biomass of soil microbial communities are interlinked across globally distributed biomes, and how variations in this relationship influence ecosystem function. To fill this knowledge gap, we conducted a field survey across global biomes, with contrasting vegetation and climate types. We show that soil carbon (C) content is associated to the microbial diversity–biomass relationship and ratio in soils across global biomes. This ratio provides an integrative index to identify those locations on Earth wherein diversity is much higher compared with biomass and vice versa. The soil microbial diversity-to-biomass ratio peaks in arid environments with low C content, and is very low in C-rich cold environments. Our study further advances that the reductions in soil C content associated with land use intensification and climate change could cause dramatic shifts in the microbial diversity-biomass ratio, with potential consequences for broad soil processes.

scholarly journals Disentangling Responses of the Subsurface Microbiome to Wetland Status and Implications for Indicating Ecosystem Functions

2021 ◽  
Vol 9 (2) ◽  
pp. 211
Author(s):  
Jie Gao ◽  
Miao Liu ◽  
Sixue Shi ◽  
Ying Liu ◽  
Yu Duan ◽  
...  
Keyword(s):  
Microbial Community ◽  
High Throughput Sequencing ◽  
Carbon Fixation ◽  
Microbial Community Composition ◽  
Ecosystem Functions ◽  
Microbial Composition ◽  
Wetland Ecosystems ◽  
Soil Microbial ◽  
Geochemical Properties ◽  
Microbial Groups

In this study, we analyzed microbial community composition and the functional capacities of degraded sites and restored/natural sites in two typical wetlands of Northeast China—the Phragmites marsh and the Carex marsh, respectively. The degradation of these wetlands, caused by grazing or land drainage for irrigation, alters microbial community components and functional structures, in addition to changing the aboveground vegetation and soil geochemical properties. Bacterial and fungal diversity at the degraded sites were significantly lower than those at restored/natural sites, indicating that soil microbial groups were sensitive to disturbances in wetland ecosystems. Further, a combined analysis using high-throughput sequencing and GeoChip arrays showed that the abundance of carbon fixation and degradation, and ~95% genes involved in nitrogen cycling were increased in abundance at grazed Phragmites sites, likely due to the stimulating impact of urine and dung deposition. In contrast, the abundance of genes involved in methane cycling was significantly increased in restored wetlands. Particularly, we found that microbial composition and activity gradually shifts according to the hierarchical marsh sites. Altogether, this study demonstrated that microbial communities as a whole could respond to wetland changes and revealed the functional potential of microbes in regulating biogeochemical cycles.

scholarly journals Towards a function-first framework to make soil microbial ecology predictive

2021 ◽  
Author(s):  
Johannes Rousk ◽  
Lettice Hicks
Keyword(s):  
Microbial Community ◽  
Environmental Factors ◽  
Microbial Communities ◽  
Functional Response ◽  
Community Composition ◽  
Ecosystem Function ◽  
Bacterial Growth ◽  
Response Curve ◽  
Ecosystem Functions ◽  
Soil Microbial

<p>Soil microbial communities perform vital ecosystem functions, such as the decomposition of organic matter to provide plant nutrition. However, despite the functional importance of soil microorganisms, attribution of ecosystem function to particular constituents of the microbial community has been impeded by a lack of information linking microbial function to community composition and structure. Here, we propose a function-first framework to predict how microbial communities influence ecosystem functions.</p><p>We first view the microbial community associated with a specific function as a whole, and describe the dependence of microbial functions on environmental factors (e.g. the intrinsic temperature dependence of bacterial growth rates). This step defines the aggregate functional response curve of the community. Second, the contribution of the whole community to ecosystem function can be predicted, by combining the functional response curve with current environmental conditions. Functional response curves can then be linked with taxonomic data in order to identify sets of “biomarker” taxa that signal how microbial communities regulate ecosystem functions. Ultimately, such indicator taxa may be used as a diagnostic tool, enabling predictions of ecosystem function from community composition.</p><p>In this presentation, we provide three examples to illustrate the proposed framework, whereby the dependence of bacterial growth on environmental factors, including temperature, pH and salinity, is defined as the functional response curve used to interlink soil bacterial community structure and function. Applying this framework will make it possible to predict ecosystem functions directly from microbial community composition.</p>

scholarly journals Soil Microbial Biogeography in a Changing World: Recent Advances and Future Perspectives

mSystems ◽  
2020 ◽  
Vol 5 (2) ◽  
Author(s):  
Haiyan Chu ◽  
Gui-Feng Gao ◽  
Yuying Ma ◽  
Kunkun Fan ◽  
Manuel Delgado-Baquerizo
Keyword(s):  
Microbial Communities ◽  
Soil Microbial Communities ◽  
Well Being ◽  
Ecosystem Functions ◽  
Soil Microbial ◽  
Microbial Biogeography ◽  
Recent Advances ◽  
Technological Advances ◽  
Global Change Scenarios ◽  
Changing World

ABSTRACT Soil microbial communities are fundamental to maintaining key soil processes associated with litter decomposition, nutrient cycling, and plant productivity and are thus integral to human well-being. Recent technological advances have exponentially increased our knowledge concerning the global ecological distributions of microbial communities across space and time and have provided evidence for their contribution to ecosystem functions. However, major knowledge gaps in soil biogeography remain to be addressed over the coming years as technology and research questions continue to evolve. In this minireview, we state recent advances and future directions in the study of soil microbial biogeography and discuss the need for a clearer concept of microbial species, projections of soil microbial distributions toward future global change scenarios, and the importance of embracing culture and isolation approaches to determine microbial functional profiles. This knowledge will be critical to better predict ecosystem functions in a changing world.

Do Neotropical peccary species (Tayassuidae) function as ecosystem engineers for anurans?

2010 ◽  
Vol 26 (4) ◽  
pp. 407-414 ◽  
Author(s):  
Harald Beck ◽  
Paporn Thebpanya ◽  
Melissa Filiaggi
Keyword(s):  
Species Interactions ◽  
Ecosystem Engineering ◽  
Ecosystem Engineers ◽  
Ecosystem Functions ◽  
Breeding Sites ◽  
Anuran Species ◽  
Β Diversity ◽  
Water Surface Area ◽  
Dry Seasons ◽  
New Habitats

Abstract:The concept of ecosystem engineering has catalysed novel approaches and models for non-trophic species interactions and ecosystem functions. Ecosystem engineers physically modify abiotic and biotic environments, thereby creating new habitats that can be colonized by a new suite of species. In the Peruvian Amazonas, we tested whether peccaries (Tayassuidae) function as ecosystem engineers by creating and maintaining wallows. Such wallows could be critical aquatic habitats and breeding sites for anuran species during dry seasons. We compared hydroperiods of 21 peccary wallows and 13 naturally formed ponds across three dry seasons and found that wallows had a consistently higher mean water surface area than ponds. We also examined the pH, dissolved oxygen and temperature, and found no significant differences in these parameters between water bodies. Wallows had a significantly higher density of tadpoles, metamorphs and adult anurans, as well as higher β-diversity and species richness than ponds. This study not only provides the first systematic evidence of the ecosystem engineering processes of peccaries, but also reveals the positive consequences of such for anuran species.

scholarly journals Vulnerability and resistance in the spatial heterogeneity of soil microbial communities under resource additions

2020 ◽  
Vol 117 (13) ◽  
pp. 7263-7270 ◽  
Author(s):  
Kelly Gravuer ◽  
Anu Eskelinen ◽  
Joy B. Winbourne ◽  
Susan P. Harrison
Keyword(s):  
Spatial Variability ◽  
Spatial Heterogeneity ◽  
Soil Microbial Communities ◽  
Archaeal Community ◽  
Ecosystem Functions ◽  
Water Addition ◽  
Microbial Composition ◽  
Soil Microbial ◽  
The Face ◽  
And Function

Spatial heterogeneity in composition and function enables ecosystems to supply diverse services. For soil microbes and the ecosystem functions they catalyze, whether such heterogeneity can be maintained in the face of altered resource inputs is uncertain. In a 50-ha northern California grassland with a mosaic of plant communities generated by different soil types, we tested how spatial variability in microbial composition and function changed in response to nutrient and water addition. Fungal composition lost some of its spatial variability in response to nutrient addition, driven by decreases in mutualistic fungi and increases in antagonistic fungi that were strongest on the least fertile soils, where mutualists were initially most frequent and antagonists initially least frequent. Bacterial and archaeal community composition showed little change in their spatial variability with resource addition. Microbial functions related to nitrogen cycling showed increased spatial variability under nutrient, and sometimes water, additions, driven in part by accelerated nitrification on the initially more-fertile soils. Under anthropogenic changes such as eutrophication and altered rainfall, these findings illustrate the potential for significant changes in ecosystem-level spatial heterogeneity of microbial functions and communities.

scholarly journals Shifting Species Interaction in Soil Microbial Community and Its Influence on Ecosystem Functions Modulating

2013 ◽  
Vol 65 (3) ◽  
pp. 700-708 ◽  
Author(s):  
Hua Li ◽  
Giovanni Colica ◽  
Pei-pei Wu ◽  
Dunhai Li ◽  
Federico Rossi ◽  
...  
Keyword(s):  
Microbial Community ◽  
Soil Microbial Community ◽  
Species Interaction ◽  
Ecosystem Functions ◽  
Soil Microbial

scholarly journals Soil Bacterial and Fungal Composition and Diversity Responses to Seasonal Deer Grazing in a Subalpine Meadow

Diversity ◽  
2021 ◽  
Vol 13 (2) ◽  
pp. 84
Author(s):  
Andéole Niyongabo Turatsinze ◽  
Baotian Kang ◽  
Tianqi Zhu ◽  
Fujiang Hou ◽  
Saman Bowatte
Keyword(s):  
Relative Abundance ◽  
Soil Microbial Communities ◽  
Gansu Province ◽  
Total Carbon ◽  
Mountain Range ◽  
Microbial Composition ◽  
Soil Microbial ◽  
Β Diversity ◽  
Α Diversity ◽  
Soil Bacterial

Soil microbial composition and diversity are widely recognized for their role in ecological functioning. This study examined the differences of soil microbial communities between two seasonally grazed grasslands. The study area was in the Gansu red deer farm located on the Qilian Mountain range in the Gansu province of northwestern China. This farm adopted a seasonal rotation grazing system whereby grasslands at higher altitudes are grazed in summer (SG), whilst grasslands at lower altitudes are grazed in winter (WG). The soil bacterial and fungal communities were examined by Illumina MiSeq sequencing. We found that soil water content (SWC), organic carbon (OC), total carbon (TC), and total nitrogen (TN) were significantly higher, whereas the C/N ratio was significantly lower in SG than WG pastures. The α-diversity of bacteria was greater than that of fungi in both pastures, while both bacterial and fungal α-diversity were not significantly different between the pastures. The bacterial β-diversity was significantly different between the pastures, but fungal β-diversity was not. The bacterial phylum Actinobacteria and fungal phylum Ascomycota were dominant in both pastures. The relative abundance of Actinobacteria in soil was significantly higher in WG pastures, whereas the relative abundance of Proteobacteria in soil was significantly higher in SG pastures. Significant correlations between bacterial and fungal phyla and soil properties were observed, but this varied between the two grasslands. This study showed that distinct microbial community structures developed in two pastures within the same geographic location that were grazed in different seasons.

scholarly journals Strong but opposing β -diversity–stability relationships in coral reef fish communities

2014 ◽  
Vol 281 (1777) ◽  
pp. 20131993 ◽  
Author(s):  
C. Mellin ◽  
C. J. A. Bradshaw ◽  
D. A. Fordham ◽  
M. J. Caley
Keyword(s):  
Community Structure ◽  
Reef Fish ◽  
Marine Protected Areas ◽  
Sampling Error ◽  
Temporal Stability ◽  
Biological Communities ◽  
Β Diversity ◽  
Spatial Turnover ◽  
Temporal Turnover ◽  
The Relationship

The ‘diversity–stability hypothesis’, in which higher species diversity within biological communities buffers the risk of ecological collapse, is now generally accepted. However, empirical evidence for a relationship between β -diversity (spatial turnover in community structure) and temporal stability in community structure remains equivocal, despite important implications for theoretical ecology and conservation biology. Here, we report strong β -diversity–stability relationships across a broad sample of fish taxa on Australia's Great Barrier Reef. These relationships were robust to random sampling error and spatial and environmental factors, such as latitude, reef size and isolation. While β -diversity was positively associated with temporal stability at the community level, the relationship was negative for some taxa, for example surgeonfishes (Acanthuridae), one of the most abundant reef fish families. This demonstrates that the β -diversity–stability relationship should not be indiscriminately assumed for all taxa, but that a species’ risk of extirpation in response to disturbance is likely to be taxon specific and trait based. By combining predictions of spatial and temporal turnover across the study area with observations in marine-protected areas, we conclude that protection alone does not necessarily confer temporal stability and that taxon-specific considerations will improve the outcome of conservation efforts.

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