ABSTRACTThe ability of bacteria to metabolize glucosamine (GlcN) andN-acetyl-d-glucosamine (GlcNAc) is considered important for persistent colonization of the oral cavity. In the dental caries pathogenStreptococcus mutans, the NagR protein regulates the expression ofglmS, which encodes a GlcN-6-P synthetase, andnagA(GlcNAc-6-P deacetylase) andnagB(GlcN-6-P deaminase), which are required for the catabolism of GlcNAc and GlcN. Two NagR-binding sites (dre) were identified in each of the promoter regions fornagBandglmS. Using promoter-reporter gene fusions, the role of eachdresite was examined in the regulation ofglmSandnagBpromoter activities in cells grown with glucose, GlcNAc, or GlcN. A synergistic relationship between the twodresites in theglmSpromoter that required proper spacing was observed, but that was not the case fornagB. Binding of purified NagR to DNA fragments from both promoter regions, as well as todresites alone, was strongly influenced by particular sugar phosphates. Using a random mutagenesis approach that targeted the effector-binding domain of NagR, mutants that displayed aberrant regulation of both theglmSandnagABgenes were identified. Collectively, these findings provide evidence that NagR is essential for regulation of genes for both the synthesis and catabolism of GlcN and GlcNAc inS. mutans, and that NagR engages differently with the target promoter regions in response to specific metabolites interacting with the effector-binding domain of NagR.IMPORTANCEGlucosamine andN-acetylglucosamine are among the most abundant naturally occurring sugars on the planet, and they are catabolized by many bacterial species as sources of carbon and nitrogen. Representing a group called lactic acid bacteria (LAB), the human dental caries pathogenStreptococcus mutansis shown to differ from known paradigm organisms in that it possesses a GntR/HutC-type regulator, NagR, that is required for the regulation of both catabolism of GlcN and biosynthesis. Results reported here reveal a simple and elegant mechanism whereby NagR differentially regulates two opposing biological processes by surveying metabolic intermediates. This study provides insights that may contribute to the development of novel therapeutic tools to combat dental caries and other infectious diseases.