Genetic characteristics and geographic segregation of Giardia duodenalis in dairy cattle from Guangdong Province, southern China

2018 ◽  
Vol 66 ◽  
pp. 95-100 ◽  
Author(s):  
Zhaohui Cui ◽  
Luyang Wang ◽  
Letian Cao ◽  
Mingfei Sun ◽  
Nan Liang ◽  
...  
PLoS ONE ◽  
2021 ◽  
Vol 16 (6) ◽  
pp. e0253622
Author(s):  
Feng Wen ◽  
Jing Yang ◽  
Anqi Li ◽  
Zhonggui Gong ◽  
Lulu Yang ◽  
...  

Porcine epidemic diarrhea virus (PEDV), a leading cause of piglet diarrhea outbreaks, poses a significant danger to the swine industry. The aim of this study was to investigate the epidemic characteristics of PEDV that was circulating in Guangdong province, one of China’s major pig producing provinces. Clinical samples were collected from eight pig farms in Guangdong province between 2018 and 2019 and tested for the major porcine enteric pathogens, including PEDV, transmissible gastroenteritis virus (TGEV), Swine enteric coronavirus (SeCoV), Swine acute diarrhea syndrome coronavirus (SADS-CoV), porcine deltacoronavirus (PDCoV), and porcine rotavirus (RV). As a result, only PEDV and RV were detected at a rate of 47.0% (16/34) and 18.6% (8/34), respectively. Coinfectoin with PEDV and RV occurred at a rate of PEDV 12.5% (2/16). Subsequently, the full-length S gene sequences of 13 PEDV strains were obtained, and phylogenetic analysis suggested the presence of GII-c group PEDV strains in this region (non-S-INDEL). Two novel common amino acid insertions (55T/IG56 and 551L) and one novel glycosylation site (1199G+) were detected when the CV777 and ZJ08 vaccine strains were compared. Furthermore, intragroup recombination events in the S gene regions 51–548 and 2478–4208 were observed in the PEDV strains studied. In summary, the observations provide current information on the incidence of viral agents causing swine diarrhea in southern China and detailed the genetic characteristics and evolutionary history of the dominant PEDV field strains. Our findings will aid in the development of an updated vaccine for the prevention and control of PEDV variant strains.


2020 ◽  
Vol 8 (8) ◽  
pp. 1107 ◽  
Author(s):  
Xin Yang ◽  
Ni Huang ◽  
Wen Jiang ◽  
Xinrui Wang ◽  
Na Li ◽  
...  

Cryptosporidium ryanae is one of the most common species for cryptosporidiosis in cattle. However, little is known of the genetic characteristics of C. ryanae due to the lack of subtyping tools. In the present study, the 60-kDa glycoprotein (gp60) gene of C. ryanae was identified in whole genome sequence data and analyzed for sequence characteristics using bioinformatics tools. The protein it encodes had some of the typical characteristics of GP60 proteins, with a signal peptide, a furin cleavage site, and a glycosylphosphatidylinositol anchor at the C terminus of the protein, and numerous O-glycosylation sites. The gene sequence was used in the development of a subtyping tool, which was used in characterizing C. ryanae from 110 specimens from dairy cattle, 2 from beef cattle, 6 from yaks, and 4 from water buffaloes in China. Altogether, 17 subtypes from 8 subtype families were recognized, namely XXIa to XXIh. Possible host adaption was identified within this species, reflected by the unique occurrence of XXIa, XXIc, and XXIh in dairy cattle, yaks, and water buffaloes, respectively. Some geographical differences were detected in the distribution of subtype families in dairy cattle; specimens from southern China showed higher genetic diversity than from northern China, and the XXIa subtype family was only seen in dairy cattle in southern and eastern China. The gp60-based subtyping tool should be useful in molecular epidemiological studies of the transmission of C. ryanae.


Forests ◽  
2018 ◽  
Vol 9 (11) ◽  
pp. 666 ◽  
Author(s):  
Juyang Liao ◽  
Linping Zhang ◽  
Yan Liu ◽  
Qiaoyun Li ◽  
Danxia Chen ◽  
...  

Food supply from forests is a fundamental component of forest ecosystem services, but information relating to suitability for human consumption and sustainable utilization of non-timber forest products (NTFPs) in developing countries is lacking. To address this gap in knowledge, diverse datasets of edible plants and macro-fungi were obtained from field collections, historical publications, and community surveys across seven cities in Guangdong Province (GP), southern China. Seven edible parts and five food categories of plant species were classified according to usage and specific nutrient components. Edible plant species were also categorized into different seasons and life forms. Our results show that at least 100 plant species (with 64 plant species producing fruit) and 20 macro-fungi were commonly used as edible forest products in subtropical GP. There were 55 and 57 species providing edible parts in summer and autumn, respectively. Many edible plants had multiple uses. Tree and herbaceous species made up the majority of the total. Our study provides evidence that both edible plants and macro-fungi can enrich the food supply for residents in rural and urban areas by acting as supplemental resources. We therefore suggest that, in spite of the prevalence of imported foods due to modern infrastructure, edible NTFPs from subtropical forests might be leveraged to support the increasing demand for food in an era of rapid urbanization and global change.


2019 ◽  
Author(s):  
Hai-Yan Ye ◽  
Fan-Fan Xing ◽  
Jin Yang ◽  
Simon Kam-Fai Lo ◽  
Ricky Wing-Tong Lau ◽  
...  

Abstract Background: Brucellosis is one of the most widespread zoonosis in the world. In China, 90% of human brucellosis occurs in six northern agricultural provinces. However, there is a recent increase in the trend of human brucellosis in southern provinces with limited cases reported in the literature. Our study aims to describe the clinical features and epidemiology of brucellosis in a tertiary hospital in southern China. Methods: A retrospective case series of brucellosis was conducted between January 1, 2014 and October 31. 2018. Cases were identified based on positive Brucella serology by tube agglutination test, or positive culture from clinical specimen identified by Vitek 2 and MALDL-TOF MS. Clinical details of brucellosis including patients’ occupation, risk factors, and complications were analyzed. Clinical characteristics between patients from Guangdong and other provinces were also compared. Results: A total of 13 cases of laboratory-confirmed brucellosis were identified. 7 (53.8%) of the patients were male, 6 (46.2%) were female, with age ranging from 29 to 73 years old (median age: 51 years). Five patients (38.5%) were from Guangdong province, while the remaining patients (61.5%) were from other provinces. The commonest risk factors of acquisition were consumption of undercooked meat and goat placenta. Patients from Guangdong province were found to be more likely to have prior placenta consumption and handling of animal meat. The commonest clinical presentations were fever, osteoarticular pain, urinary symptoms, splenomegaly, and lymphadenopathy. Spondylodiscitis/ peripheral joint arthritis (5 patients, 38.5%) was the most prevalent complication, while extra-osteoarticular complications including abdominal aortitis, hepatosplenic abscess, chest wall abscess, and epididymo-orchitis were observed in 4 other patients. Furthermore, it was demonstrated that MALDI-TOF MS is reliable in Brucella identification after additional of reference spectra with standard Brucella strain. Conclusions: Brucellosis, previously thought to be only found in northern China, is now increasingly seen in highly cosmopolitan part of southern China. MALDI-TOF MS in hospitals in China should include reference spectra with standard Brucella strain to aid bacterial identification in routine clinical practice. In addition to tuberculosis, typhoid fever and typhus, brucellosis should be considered in patients with fever of unknown origin in this locality.


2020 ◽  
Author(s):  
Jianbo Li ◽  
Weihua Fan ◽  
Yueshan Zhou ◽  
Linmei Wu ◽  
Wei Liu ◽  
...  

Abstract Background: Dental caries of deciduous teeth (Early Childhood Caries, ECC) has become a crucial oral health problem over the decades in China. The aim of this study was to examine the prevalence and severity of ECC among preschool children from Guangdong Province, Southern China. In addition, to assess the association of ECC with reported oral health-related behaviors.Methods: A cross-sectional survey was carried out in Guangdong Province by means of an equal-sized, stratified, multistage random sampling method. According to the standard for clinical dentition examination of the WHO 2013 criteria, the presence of ECC was determined by the dmft (decayed-missing-filled tooth) index using a CPI (Community Periodontal Index) probe. A questionnaire about caries-related factors was completed by each of the participants’ parents or grandparents through a face-to-face and one-on-one interview. Then, t-test, Chi2 tests, One-Way ANOVA served for statistical analysis, and logistic regression analysis as well as covariance analysis were executed to identify potential associated factors for ECC.Results: There were 2592 3- to 5-year-old preschool children. The prevalence (% dmft >0) of ECC was 68.3 (95% CI: 66.5-70.1), the mean dmft was 4.36 (95% CI: 4.17-4.55), and the filled rate was 1.2%. In multivariable modeling, associated factors for both prevalence and mean dmft were older age, rural areas, consumption of sweets before sleep, dental visit history, low household income, and low parental education level. Initiating toothbrushing after 3 years of age and being exclusively/ predominantly breastfed indicated only the prevalence; being female and frequently consuming sweetened milk/powdered milk indicated only the mean dmft.Conclusions: The preschool children in Guangdong Province experienced a significant amount of ECC. More attention should be given to children’s dental health for deciduous teeth. Associated factors for ECC included demographics, oral health measures, dietary factors, and socioeconomic factors.


1981 ◽  
Vol 52 (6) ◽  
pp. 480-482
Author(s):  
Tuguyoshi SUGANO ◽  
Kinichi WATANABE ◽  
Yasuhiro MINESAKI ◽  
Tokukazu IZUMI ◽  
Hisashi SAITO ◽  
...  

Parasite ◽  
2020 ◽  
Vol 27 ◽  
pp. 60
Author(s):  
Letian Cao ◽  
Kelei Han ◽  
Luyang Wang ◽  
Surong Hasi ◽  
Fuchang Yu ◽  
...  

Giardia duodenalis is an important zoonotic pathogen for both human and animal health. Although there have been reports on G. duodenalis infections in animals all over the world, information regarding the prevalence and genetic characteristics of G. duodenalis in sheep in Inner Mongolia, China, is limited. In this study, 209 sheep fecal specimens were collected in this autonomous region. We established that the prevalence of G. duodenalis was 64.11% (134/209), as determined using nested PCR detection and sequences analysis of the small subunit ribosomal RNA (SSU rRNA) gene. Based on the beta-giardin (bg) locus, the glutamate dehydrogenase (gdh) locus, and the triose phosphate isomerase (tpi) locus to study genetic characteristics, both assemblages A (2.99%, 4/134) and E (97.01%, 130/134) were found. Five novel nucleotide sequence of assemblage E were detected, two at the bg locus, two at the gdh locus, and one at the tpi locus. Multilocus genotyping yielded four assemblage E and two assemblage A multilocus genotypes (MLGs), including four novel assemblage E MLGs and one novel assemblage A MLG. Results of this study indicated that G. duodenalis was highly prevalent in sheep in Inner Mongolia. This study is the first to use the multilocus genotyping approach to identify G. duodenalis in sheep from this region.


Zootaxa ◽  
2019 ◽  
Vol 4671 (3) ◽  
pp. 369-380
Author(s):  
ZHI-XIANG PAN ◽  
WAN-QIN YANG

Two new species with peculiar pigmentation of the genus Homidia from Guangdong Province, Southern China are described here, Homidia chroma sp. nov. and Homidia leniseta sp. nov. H. chroma is characterized by chrome pigmentation on lateral side of terga, two macrochaetae on medial abdominal segment (Abd.) III and six macrochaetae on postero-medial Abd. IV, up to 68 sensory chaetae present on Abd. IV, and five apical smooth chaetae on posterior face of ventral tube. H. leniseta is easily identified by unique colour pattern, smooth labial chaetae l2, G1–4 and H1–3, and short trichobothria on Abd. II–IV. Illustrations of adults of this two new species, chaetotaxy of the first instar larvae of H. chroma and subadults of H. leniseta are provided herein. 


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