A combined morphometric and phylogenetic revision of the Late Ordovician brachiopod genera Eochonetes and Thaerodonta

2016 ◽  
Vol 90 (5) ◽  
pp. 888-909 ◽  
Author(s):  
Jennifer E. Bauer ◽  
Alycia L. Stigall
Keyword(s):  
New Species ◽  
Multivariate Analyses ◽  
Phylogenetic Analyses ◽  
Taxonomic Revision ◽  
Late Ordovician ◽  
Species Level ◽  
Data Types ◽  
Systematic Revision ◽  
Ecological Patterns ◽  
Three New Species

AbstractSystematic revision of the Late Ordovician brachiopod genera Eochonetes Reed, 1917 and Thaerodonta Wang, 1949 was conducted utilizing specimen-based morphometric and species-level phylogenetic analyses. Previous studies had recognized Thaerodonta and Eochonetes as either distinct taxonomic entities or synonyms. New multivariate and phylogenetic analyses confirm the synonymy of Thaerodonta with Eochonetes and provide a framework to assess evolutionary and ecological patterns within the clade. Multivariate analyses were employed to delineate species in morphospace and provided information on potential species relationships. Phylogenetic analysis was used to produce an evolutionary framework for taxonomic revision and identify character evolution within the clade. Most species previously assigned to Thaerodonta are transferred to Eochonetes, and three others are excluded from Eochonetes and provisionally referred to other sowerbyellid genera. Three new species (Eochonetes maearum new species, E. voldemortus new species, E. minerva new species) are described, one species (Leptaena saxea Sardeson, 1892) is synonymized with E. recedens Sardeson, 1892, and one subspecies (Thaerodonta mucronata scabra Howe, 1965) is rejected. This study demonstrates that a combination of complementary approaches and data types has the potential to advance interpretations beyond analyses confined to single analytical tools. Specifically, multivariate analyses provide constraints on species boundaries, whereas species-level phylogenetic analyses provide frameworks to examine morphological, ecological, and biogeographic evolution within a clade.

New olenelline trilobites from the Northwest Territories, Canada, and the phylogenetic placement of Judomia absita Fritz, 1973

Zootaxa ◽  
2011 ◽  
Vol 2918 (1) ◽  
pp. 15 ◽  
Author(s):  
I. WESLEY GAPP ◽  
BRUCE S. LIEBERMAN ◽  
MICHAEL C. POPE ◽  
KELLY A. DILLIARD
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Northwest Territories ◽  
Phylogenetic Analyses ◽  
Geographic Range ◽  
Early Cambrian ◽  
Phylogenetic Placement ◽  
The Subject ◽  
Three New Species ◽  
One New Species

The Early Cambrian olenelline trilobites are a diverse clade and have been the subject of several phylogenetic analyses. Here, three new species of Bradyfallotaspis Fritz, 1972 (B. coriae, B. nicolascagei, and B. sekwiensis) and one new species of Nevadia Walcott, 1910 (N. saupeae) are described from the Sekwi Formation of the Mackenzie Mountains, Northwest Territories, Canada. In addition, new specimens potentially referable to Nevadia ovalis McMenamin, 1987 were recovered that may expand that species’ geographic range, which was thought to be restricted to Sonora, Mexico. The results of a phylogenetic analysis incorporating several olenelline taxa, including Judomia absita Fritz, 1973 from the Sekwi Formation, are also presented herein. This species has been assigned to various olenelline genera, including Judomia Lermontova, 1951 and Paranevadella Palmer & Repina, 1993. Phylogenetic analysis suggests this species is closely related to Judomia tera Lazarenko, 1960 from Siberia. This phylogenetic relationship provides further support for the hypothesis that a close biogeographic relationship existed between Laurentia and Siberia during the Cambrian.

Molecular systematics of Thouarella (Octocorallia:Primnoidae) with the description of three new species from the Southern Ocean based on combined molecular and morphological evidence

2021 ◽  
Author(s):  
Mónica Núñez-Flores ◽  
Daniel Gomez-Uchida ◽  
Pablo J. López-González
Keyword(s):  
New Species ◽  
Southern Ocean ◽  
Species Delimitation ◽  
Nuclear Dna ◽  
Phylogenetic Analyses ◽  
Weddell Sea ◽  
Morphological Evidence ◽  
Three New Species ◽  
Taxonomic Framework ◽  
The Antarctic

Thouarella Gray, 1870, is one of the most speciose genera among gorgonians of the family Primnoidae (Cnidaria:Octocorallia:Anthozoa), being remarkably diverse in the Antarctic and sub-Antarctic seafloor. However, their diversity in the Southern Ocean is likely underestimated. Phylogenetic analyses of mitochondrial and nuclear DNA markers were integrated with species delimitation approaches as well as morphological colonial and polyps features and skeletal SEM examinations to describe and illustrate three new species within Thouarella, from the Weddell Sea, Southern Ocean: T. amundseni sp. nov., T. dolichoespinosa sp. nov. and T. pseudoislai sp. nov. Our species delimitation results suggest, for the first time, the potential presence of Antarctic and sub-Antarctic cryptic species of primnoids, based on the likely presence of sibling species within T. undulata and T. crenelata. With the three new species here described, the global diversity of Thouarella has increased to 41 species, 15 of which are endemic to the Antarctic and sub-Antarctic waters. Consequently, our results provide new steps for uncovering the shelf benthonic macrofauna’s hidden diversity in the Southern Ocean. Finally, we recommend using an integrative taxonomic framework in this group of organisms and species delimitation approaches because the distinctions between some Thouarella species based only on a superficial examination of their macro- and micromorphological features is, in many cases, limited.

Taxonomic revision of species of Haematoloechus Looss, 1899 (Digenea: Plagiorchioidea), with molecular phylogenetic analysis and the description of three new species from Mexico

Zootaxa ◽  
2018 ◽  
Vol 4526 (3) ◽  
pp. 251 ◽  
Author(s):  
VIRGINIA LEÓN-RÈGAGNON ◽  
JANET TOPAN
Keyword(s):  
New Species ◽  
Taxonomic Revision ◽  
Morphological Characters ◽  
Nomen Nudum ◽  
Phylogenetic Hypothesis ◽  
Molecular Phylogenetic ◽  
Phylogenetic Hypotheses ◽  
Three New Species ◽  
Host Parasite ◽  
Species Inquirendae

Lung flukes of the genus Haematoloechus Looss, 1899 are common parasites of anurans worldwide, but the taxonomy of the group has been confusing. In this taxonomic revision, 89 species of Haematoloechus (= Pneumonoeces Looss, 1902, Ostioloides Odening, 1960, Ostiolum Pratt, 1903, Skrjabinoeces Sudarikov, 1950, Neohaematoloechus Odening, 1960, Metahaematoloechus Yamaguti, 1971) are listed. Of these, 70 are considered valid, three are species inquirendae (H. legrandi Mañé–Garzón & Gil, 1959, H. latoricensis Kozák, 1968 & H. vitelloconfluentum (Rai, 1962) Saeed, Al–Barwari & Al-Harmni, 2007), one is a nomen nudum H. sudarikovi Belouss, 1962, 14 are junior synonyms and one belongs to Ostioloides. This publication also describes three new species, H. occidentalis n. sp., H. veracruzanus n. sp. and H. mexicanus n. sp., parasitizing species of Rana Linnaeus in Mexico and redescribes Haematoloechus caballeroi (Skrjabin & Antipin, 1962) Yamaguti, 1971. The phylogenetic hypotheses based on sequences of mitochondrial and ribosomal DNA of Haematoloechus spp. show that genera proposed on the basis of morphological characters are not supported. The host records for species of Haematoloechus, together with the phylogenetic hypothesis of the genus, suggest that this host-parasite association predates the ranid diversification in the Cretaceous. 

scholarly journals Revision of Diphaulacosoma Jacoby, an endemic flea beetle genus from Madagascar, with description of three new species (Coleoptera: Chrysomelidae, Galerucinae, Alticini)

2016 ◽  
Vol 48 (2) ◽  
pp. 143 ◽  
Author(s):  
Maurizio Biondi ◽  
Paola D'Alessandro
Keyword(s):  
New Species ◽  
Electron Micrographs ◽  
Flea Beetle ◽  
Taxonomic Revision ◽  
Scanning Electron Micrographs ◽  
Diagnostic Characters ◽  
New Material ◽  
Three New Species ◽  
Scanning Electron

A taxonomic revision of the flea beetle genus <em>Diphaulacosoma</em> Jacoby, endemic to Madagascar, is provided. This genus includes seven species of which three are new to science: <em>D. elegans</em> sp. n., <em>D. jenisi</em> sp. n., and <em>D. nigroscutis</em> sp. n. An updated catalogue including new material, new faunistic records, distributions, chorotypes, and ecological notes is supplied. Lectotypes for <em>Diphaulacosoma</em> <em>laevipenne</em> Jacoby, <em>D. bicolor</em> (Weise) and <em>D. scutellare</em> (Weise) are designated. Additionally, the revision comprises a key for the identification of all seven species considered, habitus photos, and microscope and scanning electron micrographs of diagnostic characters, including aedeagus and spermatheca.

Generic classification of some more hyphomycetes with solitary conidia borne on phialides

1998 ◽  
Vol 76 (9) ◽  
pp. 1570-1583 ◽  
Author(s):  
W Gams ◽  
K O'Donnell ◽  
H -J Schroers ◽  
M Christensen
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Large Subunit ◽  
Elongation Factor ◽  
28S Rdna ◽  
New Combination ◽  
Rdna Sequences ◽  
28S Rdna Sequences ◽  
Three New Species ◽  
Morphological Species

Unlike most phialide-producing fungi that liberate a multiplicity of conidia from each conidiogenous cell, only single conidia are formed on phialide-like conidiogenous cells in Aphanocladium, Verticimonosporium, and some species of Sibirina. A group of isolates obtained from soil of native Artemisia tridentata (sagebrush) grassland in Wyoming and from desert soil in Iraq is compared with these genera and classified as a fourth genus, Stanjemonium, honouring Stanley J. Hughes. Phylogenetic analyses of partial nuclear small- (18S) and large-subunit (28S) rDNA sequences indicate that Stanjemonium spp. form a monophyletic group with Emericellopsis. Sequences from the nuclear 18S and 28S rDNA were too conserved to resolve morphological species of Stanjemonium; however, phylogenetic analysis of b-tubulin and translation elongation factor 1a gene exons and introns resolved all species distinguished morphologically. Numerous conidiogenous cells or denticles are scattered along the cells of aerial hyphae in Aphanocladium and Stanjemonium spp., very rapidly collapsing into denticles in the former, somewhat more persistent and leaving broad scars in the latter. In Cladobotryum-Sibirina and Verticimonosporium spp., conidiogenous cells are discrete in terminal and intercalary whorls; phialides of the latter taxon are particularly swollen. The taxonomy of Aphanocladium is not yet resolved. Two species are recognized in Verticimonosporium. Three new species of Stanjemonium are described, and one new combination from Aphanocladium is proposed, along with one new species of Cladobotryum.Key words: Aphanocladium, Cladobotryum, conidiogenesis, hyphomycetes, molecular phylogeny, phialide, Stanjemonium, systematics, Verticimonosporium.

scholarly journals New Species of Tomentella (Thelephorales, Basidiomycota) from Temperate Continental Mountain Climate of China (Xinjiang Region)

Forests ◽  
2021 ◽  
Vol 12 (11) ◽  
pp. 1531
Author(s):  
Xu Lu ◽  
Haisheng Yuan
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Large Subunit ◽  
Morphological Characteristics ◽  
Northwest China ◽  
Tropical Regions ◽  
Mountain Climate ◽  
Molecular Phylogenetic ◽  
Three New Species ◽  
Xinjiang Autonomous Region

Species in the genus Tomentella are distributed throughout the temperate and tropical regions worldwide, but few studies associated with the taxonomy and phylogeny of this genus had been reported from Northwest China. In this paper, molecular phylogenetic analyses of the nuclear ribosomal ITS (internal transcribed spacer: ITS1-5.8S-ITS2) and LSU (large subunit: 28S) sequences combined with morphological characteristics identified three new species from Xinjiang Autonomous Region in Northwest China, which were named T. aurantispora, T. kanasensis, and T. schrenkiana. Similar macromorphological and anatomical characteristics are shared by these new species: arachnoid basidiocarps; byssoid sterile margins; utriform basidia with a clamp connection at the base; the absence of rhizomorphs and cystidia; and slightly thick-walled, subglobose to globose basidiospores. Among these new species, the color of the hymenophoral surface, the size of the basidiospores, and some other features can be used for species delimitation. The new species and closely related species in the phylogenetic tree were discussed, and a key to the identified species of Tomentella from China was provided.

scholarly journals Taxonomic revision of Russula subsection Amoeninae from South Korea

MycoKeys ◽  
2020 ◽  
Vol 75 ◽  
pp. 1-29
Author(s):  
Komsit Wisitrassameewong ◽  
Myung Soo Park ◽  
Hyun Lee ◽  
Aniket Ghosh ◽  
Kanad Das ◽  
...  
Keyword(s):  
New Species ◽  
South Korea ◽  
Central America ◽  
North American ◽  
Internal Transcribed Spacer ◽  
Phylogenetic Analyses ◽  
Taxonomic Revision ◽  
Molecular Phylogenetic ◽  
Pileus Surface ◽  
A New Species

Russula subsection Amoeninae is morphologically defined by a dry velvety pileus surface, a complete absence of cystidia with heteromorphous contents in all tissues, and spores without amyloid suprahilar spot. Thirty-four species within subsection Amoeninae have been published worldwide. Although most Russula species in South Korea have been assigned European or North American names, recent molecular studies have shown that Russula species from different continents are not conspecific. Therefore, the present study aims to: 1) define which species of Russula subsection Amoeninae occur on each continent using molecular phylogenetic analyses; 2) revise the taxonomy of Korean Amoeninae. The phylogenetic analyses using the internal transcribed spacer (ITS) and multilocus sequences showed that subsection Amoeninae is monophyletic within subgenus Heterophyllidiae section Heterophyllae. A total of 21 Russula subsection Amoeninae species were confirmed from Asia, Australia, Europe, North America, and Central America, and species from different continents formed separate clades. Three species were recognized from South Korea and were clearly separated from the European and North American species. These species are R. bella, also reported from Japan, a new species described herein, Russula orientipurpurea, and a new species undescribed due to insufficient material.

Taxonomic revision of the genus Eulimella (Gastropoda, Pyramidellidae) from Brazil, with description of three new species

Zootaxa ◽  
2011 ◽  
Vol 3063 (1) ◽  
pp. 22 ◽  
Author(s):  
ALEXANDRE DIAS PIMENTA ◽  
FRANKLIN NOEL DOS SANTOS ◽  
RICARDO SILVA ABSALÃO
Keyword(s):  
New Species ◽  
Taxonomic Status ◽  
Taxonomic Revision ◽  
Shell Morphology ◽  
Biological Information ◽  
Brazilian Coast ◽  
Similar Species ◽  
South American Species ◽  
Western Atlantic ◽  
Three New Species

A taxonomic revision of the pyramidellid genus Eulimella from Brazil was performed based on shell morphology. The holotype of Eulimella rudis Watson, 1886 is illustrated and compared to shells from the southeast Brazilian coast, this being the first confirmed record of this species after its original description. Eulimella smithii (Verrill, 1880), previously known from northern localities in the western Atlantic, is recorded from the southwestern Atlantic, along virtually the entire Brazilian coast; it is herein considered a distinct taxon from Eulimella unifasciata (Forbes, 1844), a very similar species from the eastern Atlantic, given the lack of data on development to consider an amphi-Atlantic distribution. Three new species are described: Eulimella torquata sp. nov., diagnosed by a constriction in the middle of each teleoconch whorl caused by a strong spiral furrow, producing a bilobed whorl profile; Eulimella cylindrata sp. nov., diagnosed by a large subcylindrical teleoconch; and Eulimella ejuncida sp. nov., characterized by its very slender shell, and small protoconch with only one whorl and with an “arc” shaped suture. The shells herein identified as Eulimella cf. calva from Brazil are conchologically identical to Eulimella calva Schander, 1994, from West Africa, but their taxonomic status should remain dubious because of lack of biological information to evaluate a possible amphi-Atlantic distribution pattern. All the species studied (except Eulimella ejuncida sp. nov.) have characteristic short microscopic axial threads organized in a spiral belt, varying in position and expression among species, but usually located in the middle of each teleoconch whorl or below the suture; this characteristic is also present in some species from the eastern Atlantic. Three South American species, originally or subsequently allocated in Eulimella, are herein considered as not belonging to this genus: Eulimella argentina Doello-Jurado, 1938; Eulimella bahiensis Castellanos, 1982; and Eulimella xenohyes (Melvill & Standen, 1912). The holotype of Eulimella lissa is illustrated with SEM micrographs.

Lost and Found: Taxonomic revision of the speckled skink (Oligosoma infrapunctatum; Reptilia; Scincidae) species complex from New Zealand reveals a potential cryptic extinction, resurrection of two species, and description of three new species

Zootaxa ◽  
2019 ◽  
Vol 4623 (3) ◽  
pp. 441-484
Author(s):  
SABINE MELZER ◽  
ROD A. HITCHMOUGH ◽  
TRENT BELL ◽  
DAVID G. CHAPPLE ◽  
GEOFF B. PATTERSON
Keyword(s):  
New Species ◽  
New Zealand ◽  
Native Species ◽  
Species Complex ◽  
Taxonomic Revision ◽  
Genetic Lineages ◽  
Lost And Found ◽  
Type Population ◽  
Single Genus ◽  
Three New Species

New Zealand has a diverse skink fauna, comprising 45 described native species, and at least 15 undescribed taxa, within the single genus Oligosoma Girard, 1857. One of the earliest described, and best known, species is the speckled skink, Oligosoma infrapunctatum (Boulenger 1887). Despite a relatively stable taxonomic history for nearly 114 years, recent molecular work has indicated that O. infrapunctatum represents a species complex, comprising numerous genetically divergent, range restricted taxa. We completed the first stage of a taxonomic revision of O. infrapunctatum, conducting a morphological re-evaluation of existing voucher material, and newly collected specimens, and generated a molecular phylogeny for the species complex. This allowed us to distinguish six species: O. infrapunctatum, two species resurrected from synonymy (O. newmani, O. robinsoni), and three new species (O. salmo sp. nov., O. albornense sp. nov. O. auroraensis sp. nov.). The name bearing type population of O. infrapunctatum has not been located again for at least 130 years: it remains to be rediscovered and may already be extinct. Two of the six species here are considered ‘Nationally Critical’ (O. albornense sp. nov., O. salmo sp. nov.) under the New Zealand Threat Classification System, the others are Nationally Vulnerable (O. auroraensis sp. nov.) and At Risk—Relict (O. newmani, O. robinsoni). Further taxonomic work will be required to determine the taxonomy of other speckled skink genetic lineages in the South Island, particularly O. aff. infrapunctatum “cobble”, O. “Hokitika”, O. “Southern North Island” and O. “Westport”. 

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