scholarly journals DNA signature of thermophilic bacteria from the aged accretion ice of Lake Vostok, Antarctica: implications for searching for life in extreme icy environments

2004 ◽  
Vol 3 (1) ◽  
pp. 1-12 ◽  
Author(s):  
Sergey A. Bulat ◽  
Irina A. Alekhina ◽  
Michel Blot ◽  
Jean-Robert Petit ◽  
Martine de Angelis ◽  
...  

We have used 16S ribosomal genes to estimate the bacterial contents of Lake Vostok accretion ice samples at 3551 m and 3607 m, both containing sediment inclusions and formed 20000–15000 yr ago. Decontamination proved to be a critical issue, and we used stringent ice chemistry-based procedures and comprehensive biological controls in order to restrain contamination. As a result, up to now we have only recognized one 16S rDNA bacterial phylotype with confident relevance to the lake environment. It was found in one sample at 3607 m depth and represents the extant thermophilic facultative chemolithoautotroph Hydrogenophilus thermoluteolus of beta-Proteobacteria, and until now had only been found in hot springs. No confident findings were detected in the sample at 3551 m, and all other phylotypes revealed (a total of 16 phylotypes, 336 clones including controls) are presumed to be contaminants. It seems that the Lake Vostok accretion ice is actually microbe-free, indicating that the water body should also be hosting a highly sparse life. The message of thermophilic bacteria suggests that a geothermal system exists beneath the cold water body of Lake Vostok, what is supported by the geological setting, the long-term seismotectonic evidence from 4He degassing and the ‘18O shift’ of the Vostok accretion ice. The seismotectonic activity that seems to operate in deep faults beneath the lake could sustain thermophilic chemolithoautotrophic microbial communities. Such a primary production scenario for Lake Vostok may have relevance for icy planets and the approaches used for estimating microbial contents in accretion ice are clearly relevant for searching for extraterrestrial life.

2018 ◽  
Vol 37 (2) ◽  
pp. 626-645
Author(s):  
Wei Zhang ◽  
Guiling Wang ◽  
Linxiao Xing ◽  
Tingxin Li ◽  
Jiayi Zhao

The geochemical characteristics of geothermically heated water can reveal deep geothermal processes, leading to a better understanding of geothermal system genesis and providing guidance for improved development and utilization of such resources. Hydrochemical and hydrogen oxygen isotope analysis of two geothermal field (district) hot springs based on regional geothermal conditions revealed that the thermal water in the Litang region is primarily of the HCO3Na type. The positive correlations found between F−, Li2+, As+, and Cl− indicated a common origin, and the relatively high Na+ and metaboric acid concentrations suggested a relatively long groundwater recharge time and a slow flow rate. The values of δD and δ18O were well distributed along the local meteoric line, indicating a groundwater recharge essentially driven by precipitation. The thermal reservoir temperature (152°C–195°C) and thermal cycle depth (3156–4070 m) were calculated, and the cold water mixing ratio (60%–68%) was obtained using the silica-enthalpy model. Finally, hydrogeochemical pathway simulation was used to analyze the evolution of geothermal water in the region. The results were further supported by the high metasilicate content in the region. Of the geothermal fields in the region, it was found that the Kahui is primarily affected by albite, calcite precipitation, and silicate, while the Gezha field is primarily affected by calcite dissolution, dolomite precipitation, and silicate.


2011 ◽  
Vol 22 ◽  
pp. S88
Author(s):  
Kadriye İnan ◽  
Müslüm Tokgöz ◽  
Sabriye Çanakçi ◽  
Ali Osman Beldüz

2018 ◽  
Vol 44 (1) ◽  
pp. 75-85
Author(s):  
S. A. Alrumman ◽  
Y. S. Mostafa ◽  
Shekha T. S. Al-Qahtani ◽  
T. Sahlabji ◽  
T. H. Taha

2020 ◽  
Vol 21 (11) ◽  
Author(s):  
Kenny Lischer ◽  
ANANDA BAGUS RICHKY DIGDAYA PUTRA ◽  
Brian Wirawan Guslianto ◽  
Forbes Avila ◽  
Sarah Grace Sitorus ◽  
...  

Abstract. Lischer K, Putra ABRD, Guslianto BW, Avilla F, Sitorus SG, Nugraha Y, Sarmoko. 2020. Short Communication: The emergence and rise of indigenous thermophilic bacteria exploration from hot springs in Indonesia. Biodiversitas 21: 5474-5481. Indonesia is an archipelagic country located in the pacific ring of fire, and is estimated to cause numerous hot springs spread across the country. In addition, small living microbes have been explored in these locations since 1985. These microbes possess the ability to survive in areas with high temperature (more than 40oC-90oC), and are therefore termed thermophiles. Hence, massive explorations have been conducted on Java island and other unexplored areas at Sumatra to Papua in New Guinea islands. Moreover, a total of 71 hot springs characterized by the presence of thermophilic bacteria have been explored in Indonesia. These investigations ensue with various approaches, including through conventional and microbiological, 16S rRNA, as well as whole-genome sequencing methods. In addition to species exploration, the application of thermophiles has become a topic of interest from 1999, especially based on thermostable enzymes with the capacity to maintain activity at high-temperature conditions. These include amylase, protease, lipase, xylanase, esterase, and cellulase as the most common isolated form, which indicates the existence of significant extractable potentials. Hence, there is a need for further research in terms of both exploration and application purposes.


10.5109/9250 ◽  
2006 ◽  
Vol 51 (2) ◽  
pp. 331-336
Author(s):  
Shinnosuke Kakizaki ◽  
Kunihiko Hamagami ◽  
Ken Mori ◽  
Yasumaru Hirai

2005 ◽  
pp. 251-267 ◽  
Author(s):  
Robin Bell ◽  
Michael Studinger ◽  
Anahita Tikku ◽  
John D. Castello

Biology ◽  
2020 ◽  
Vol 9 (3) ◽  
pp. 55 ◽  
Author(s):  
Colby Gura ◽  
Scott O. Rogers

A combined metatranscriptomic and metagenomic study of Vostok (Antarctica) ice core sections from glacial, basal, and lake water accretion ice yielded sequences that indicated a wide variety of species and possible conditions at the base of the glacier and in subglacial Lake Vostok. Few organisms were in common among the basal ice and accretion ice samples, suggesting little transmission of viable organisms from the basal ice meltwater into the lake water. Additionally, samples of accretion ice, each of which originated from water in several locations of the shallow embayment, exhibit only small amounts of mixing of species. The western-most portion of the embayment had very low numbers of organisms, likely due to biologically challenging conditions. Increasing numbers of organisms were found progressing from west to east, up to approximately 7 km into the embayment. At that point, the numbers of unique sequences and sequence reads from thermophilic, thermotolerant, psychrophilic, and psychrotolerant organisms increased dramatically, as did sequences from alkaliphilic, alkalitolerant, acidophilic, and acidotolerant sequences. The number of unique and total sequences were positively associated with increases in concentrations of Na+, Ca2+, Mg2+, SO42−, Cl−, total amino acids, and non-purgeable organic carbon. The numbers of unique sequences from organisms reported from soil, sediment, ice, aquatic, marine, animal, and plant (probably pollen) sources also peaked in this region, suggesting that this was the most biologically active region. The confluence of the high numbers of organisms, physiologies, and metabolic capabilities suggests the presence of energy and nutrient sources in the eastern half of the embayment. Data from the main basin suggested a cold oligotrophic environment containing fewer organisms. In addition to bacteria, both the basal ice and accretion ice contained sequences from a diverse assemblage of eukaryotes, as well as from bacteria that are known to be associated with multicellular eukaryotes.


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