scholarly journals Exploring the metabolic biomarkers and pathway changes in crucian under carbonate alkalinity exposure using high-throughput metabolomics analysis based on UPLC-ESI-QTOF-MS

RSC Advances ◽  
2020 ◽  
Vol 10 (3) ◽  
pp. 1552-1571
Author(s):  
Yan-chun Sun ◽  
Shi-cheng Han ◽  
Ming-zhu Yao ◽  
Hong-bai Liu ◽  
Yu-mei Wang

We explore the metabolic biomarker and pathway changes accompanying the adaptive evolution of crucian subjected to carbonate alkalinity exposure, using UPLC-ESI-QTOF-MS, in order to understand the molecular physiological mechanisms of saline–alkali tolerance.

RSC Advances ◽  
2018 ◽  
Vol 8 (13) ◽  
pp. 7205-7212 ◽  
Author(s):  
Yu Zhang ◽  
Yunxia Xiu ◽  
Chunna Ren ◽  
Cui Chen

It has increasingly been recognized that metabolism is highly interconnected with disease, and system metabolomics studies have aimed to discover metabolic biomarkers and analyze the pathways of metabolome phenotypes.


2021 ◽  
Vol 8 ◽  
Author(s):  
Shan-shan Li ◽  
Ming Niu ◽  
Jing Jing ◽  
Ying Huang ◽  
Zi-teng Zhang ◽  
...  

Objectives: Autoimmune hepatitis (AIH) can progress into severe outcomes, i.e., decompensated cirrhosis, from remarkable and persistent inflammation in the liver. Considering the energy-expending nature of inflammation, we tried to define the metabolomics signatures of AIH to uncover the underlying mechanisms of cirrhosis development and its metabolic biomarkers.Methods: Untargeted metabolomics analysis was performed on sera samples from 79 AIH patients at the stages (phenotypes) of non-cirrhosis (n = 27), compensated cirrhosis (n = 22), and decompensated cirrhosis (n = 30). Pattern recognition was used to find unique metabolite fingerprints of cirrhosis with or without decompensation.Results: Out of the 294 annotated metabolites identified, 2 metabolic fingerprints were found associated with the development of cirrhosis (independent of the decompensated state, 42 metabolites) and the evolution of decompensated cirrhosis (out of 47 metabolites), respectively. The cirrhosis-associated fingerprints (eigenmetabolite) showed better capability to differentiate cirrhosis from non-cirrhosis patients than the aminotransferase-to-platelet ratio index. From the metabolic fingerprints, we found two pairs of metabolites (Mesobilirubinogen/6-Hydroxynicotinic acid and LysoPA(8:0/0:0)/7alpha-Hydroxycholesterol) calculated as ratio of intensities, which revealed robust abilities to identify cirrhosis or predict decompensated patients, respectively. These phenotype-related fingerprint metabolites featured fundamental energy supply disturbance along with the development of AIH cirrhosis and progression to decompensation, which was characterized as increased lipolysis, enhanced proteolysis, and increased glycolysis.Conclusions: Remodeling of metabolism to meet the liver inflammation-related energy supply is one of the key signatures of AIH in the development of cirrhosis and decompensation. Therefore, drug regulation metabolism has great potential in the treatment of AIH.


RSC Advances ◽  
2019 ◽  
Vol 9 (30) ◽  
pp. 17490-17500
Author(s):  
Yan-Li Zhang ◽  
Peng-Cheng Yu ◽  
Peng Liu

In this study, we probed the molecular mechanisms of metabolic biomarkers and pathways affected by the bioactive ingredient geniposide (GP), which was shown to protect against experimental allergic rhinitis in mice.


RSC Advances ◽  
2020 ◽  
Vol 10 (4) ◽  
pp. 2347-2358 ◽  
Author(s):  
Wen-xiu Li ◽  
Ai-hua Zhang ◽  
Xiao-hang Zhou ◽  
Yang Nan ◽  
Qi Liu ◽  
...  

Lipidomics, a branch of metabonomics, could provide a powerful technique for discovery of lipid molecules to reveal disease status and drug efficacy.


RSC Advances ◽  
2016 ◽  
Vol 6 (13) ◽  
pp. 11008-11013 ◽  
Author(s):  
Qun Liang ◽  
Han Liu ◽  
Yan Jiang ◽  
Haitao Xing ◽  
Tianyu Zhang ◽  
...  

Sepsis-induced acute lung injury (ALI) remains a leading cause of death in intensive care units and early detection is very important. This work showed that metabolite phenotype profiling might be a useful tool for the effective diagnosis and further understanding of ALI.


RSC Advances ◽  
2019 ◽  
Vol 9 (19) ◽  
pp. 10905-10913 ◽  
Author(s):  
Hong-dan Xu ◽  
Wen Luo ◽  
Yuanlong Lin ◽  
Jiawen Zhang ◽  
Lijuan Zhang ◽  
...  

High-throughput metabolomics can discover potential therapeutic targets for non-small cell lung cancer.


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