Estimating LAI and mapping canopy storage capacity for hydrological applications in wattle infested ecosystems using Sentinel-2 MSI derived red edge bands

2018 ◽  
Vol 56 (1) ◽  
pp. 68-86 ◽  
Author(s):  
Mbulisi Sibanda ◽  
Onisimo Mutanga ◽  
Timothy Dube ◽  
Thulile S Vundla ◽  
Paramu L Mafongoya
Keyword(s):  
Storage Capacity ◽  
Red Edge ◽  
Hydrological Applications ◽  
Sentinel 2

scholarly journals Assessing Leaf Biomass of Agave sisalana Using Sentinel-2 Vegetation Indices

2021 ◽  
Vol 13 (2) ◽  
pp. 233
Author(s):  
Ilja Vuorinne ◽  
Janne Heiskanen ◽  
Petri K. E. Pellikka
Keyword(s):  
Near Infrared ◽  
Vegetation Indices ◽  
Fibre Production ◽  
Additive Models ◽  
Leaf Biomass ◽  
Ground Vegetation ◽  
Perennial Crop ◽  
Red Edge ◽  
Agave Sisalana ◽  
Sentinel 2

Biomass is a principal variable in crop monitoring and management and in assessing carbon cycling. Remote sensing combined with field measurements can be used to estimate biomass over large areas. This study assessed leaf biomass of Agave sisalana (sisal), a perennial crop whose leaves are grown for fibre production in tropical and subtropical regions. Furthermore, the residue from fibre production can be used to produce bioenergy through anaerobic digestion. First, biomass was estimated for 58 field plots using an allometric approach. Then, Sentinel-2 multispectral satellite imagery was used to model biomass in an 8851-ha plantation in semi-arid south-eastern Kenya. Generalised Additive Models were employed to explore how well biomass was explained by various spectral vegetation indices (VIs). The highest performance (explained deviance = 76%, RMSE = 5.15 Mg ha−1) was achieved with ratio and normalised difference VIs based on the green (R560), red-edge (R740 and R783), and near-infrared (R865) spectral bands. Heterogeneity of ground vegetation and resulting background effects seemed to limit model performance. The best performing VI (R740/R783) was used to predict plantation biomass that ranged from 0 to 46.7 Mg ha−1 (mean biomass 10.6 Mg ha−1). The modelling showed that multispectral data are suitable for assessing sisal leaf biomass at the plantation level and in individual blocks. Although these results demonstrate the value of Sentinel-2 red-edge bands at 20-m resolution, the difference from the best model based on green and near-infrared bands at 10-m resolution was rather small.

scholarly journals Estimating Aboveground Biomass Using Sentinel-2 MSI Data and Ensemble Algorithms for Grassland in the Shengjin Lake Wetland, China

2021 ◽  
Vol 13 (8) ◽  
pp. 1595
Author(s):  
Chunhua Li ◽  
Lizhi Zhou ◽  
Wenbin Xu
Keyword(s):  
Aboveground Biomass ◽  
Carbon Accounting ◽  
Dynamic Monitoring ◽  
Gradient Boosting ◽  
Biomass Estimation ◽  
Floodplain Wetlands ◽  
Red Edge ◽  
Extreme Gradient Boosting ◽  
Ensemble Algorithms ◽  
Sentinel 2

Wetland vegetation aboveground biomass (AGB) directly indicates wetland ecosystem health and is critical for water purification, carbon cycle, and biodiversity conservation. Accurate AGB estimation is essential for the monitoring and supervision of ecosystems, especially in seasonal floodplain wetlands. This paper explored the capability of spectral and texture features from the Sentinel-2 Multispectral Instrument (MSI) for modeling grassland AGB using random forest (RF) and extreme gradient boosting (XGBoost) algorithms in Shengjin Lake wetland (a Ramsar site). We use five-fold cross-validation to verify the model effectiveness. The results indicated that the RF and XGBoost models had a robust and efficient performance (with root mean square error (RMSE) of 126.571 g·m−2 and R2 of 0.844 for RF, RMSE of 112.425 g·m−2 and R2 of 0.869 for XGBoost), and the XGBoost models, by contrast, performed better. Both traditional and red-edge vegetation indices (VIs) obtained satisfactory results of AGB estimation (RMSE = 127.936 g·m−2, RMSE = 125.879 g·m−2 in XGBoost models, respectively), with the red-edge VIs contributed more to the AGB models. Moreover, we selected eight gray-level co-occurrence matrix (GLCM) textures calculated by four processing window sizes using the mean value of four offsets, and further analyzed the results of three analysis sets. Textures derived from traditional and red-edge bands using a 7 × 7 window size performed better in biomass estimation. This finding suggested that textures derived from the traditional bands were as important as the red-edge bands. The introduction of textures moderately improved the accuracy of modeling AGB, whereas the use of textures alo ne was not satisfactory. This research demonstrated that using the Sentinel-2 MSI and the two ensemble algorithms is an effective method for long-term dynamic monitoring and assessment of grass AGB in seasonal floodplain wetlands, which can support sustainable management and carbon accounting of wetland ecosystems.

scholarly journals Status of Phenological Research Using Sentinel-2 Data: A Review

2020 ◽  
Vol 12 (17) ◽  
pp. 2760
Author(s):  
Gourav Misra ◽  
Fiona Cawkwell ◽  
Astrid Wingler
Keyword(s):  
Vegetation Index ◽  
Temporal Frequency ◽  
Short Wave ◽  
Current State ◽  
Red Edge ◽  
Natural Grasslands ◽  
Wide Range ◽  
Normalised Difference Vegetation Index ◽  
Satellite Sensors ◽  
Sentinel 2

Remote sensing of plant phenology as an indicator of climate change and for mapping land cover has received significant scientific interest in the past two decades. The advancing of spring events, the lengthening of the growing season, the shifting of tree lines, the decreasing sensitivity to warming and the uniformity of spring across elevations are a few of the important indicators of trends in phenology. The Sentinel-2 satellite sensors launched in June 2015 (A) and March 2017 (B), with their high temporal frequency and spatial resolution for improved land mapping missions, have contributed significantly to knowledge on vegetation over the last three years. However, despite the additional red-edge and short wave infra-red (SWIR) bands available on the Sentinel-2 multispectral instruments, with improved vegetation species detection capabilities, there has been very little research on their efficacy to track vegetation cover and its phenology. For example, out of approximately every four papers that analyse normalised difference vegetation index (NDVI) or enhanced vegetation index (EVI) derived from Sentinel-2 imagery, only one mentions either SWIR or the red-edge bands. Despite the short duration that the Sentinel-2 platforms have been operational, they have proved their potential in a wide range of phenological studies of crops, forests, natural grasslands, and other vegetated areas, and in particular through fusion of the data with those from other sensors, e.g., Sentinel-1, Landsat and MODIS. This review paper discusses the current state of vegetation phenology studies based on the first five years of Sentinel-2, their advantages, limitations, and the scope for future developments.

scholarly journals Spaceborne Estimation of Leaf Area Index in Cotton, Tomato, and Wheat Using Sentinel-2

Land ◽  
2021 ◽  
Vol 10 (5) ◽  
pp. 505
Author(s):  
Gregoriy Kaplan ◽  
Offer Rozenstein
Keyword(s):  
Water Vapor ◽  
Leaf Area Index ◽  
Leaf Area ◽  
Vegetation Index ◽  
Near Infrared ◽  
Linear Regression Models ◽  
Area Index ◽  
Estimation Performance ◽  
Red Edge ◽  
Sentinel 2

Satellite remote sensing is a useful tool for estimating crop variables, particularly Leaf Area Index (LAI), which plays a pivotal role in monitoring crop development. The goal of this study was to identify the optimal Sentinel-2 bands for LAI estimation and to derive Vegetation Indices (VI) that are well correlated with LAI. Linear regression models between time series of Sentinel-2 imagery and field-measured LAI showed that Sentinel-2 Band-8A—Narrow Near InfraRed (NIR) is more accurate for LAI estimation than the traditionally used Band-8 (NIR). Band-5 (Red edge-1) showed the lowest performance out of all red edge bands in tomato and cotton. A novel finding was that Band 9 (Water vapor) showed a very high correlation with LAI. Bands 1, 2, 3, 4, 5, 11, and 12 were saturated at LAI ≈ 3 in cotton and tomato. Bands 6, 7, 8, 8A, and 9 were not saturated at high LAI values in cotton and tomato. The tomato, cotton, and wheat LAI estimation performance of ReNDVI (R2 = 0.79, 0.98, 0.83, respectively) and two new VIs (WEVI (Water vapor red Edge Vegetation Index) (R2 = 0.81, 0.96, 0.71, respectively) and WNEVI (Water vapor narrow NIR red Edge Vegetation index) (R2 = 0.79, 0.98, 0.79, respectively)) were higher than the LAI estimation performance of the commonly used NDVI (R2 = 0.66, 0.83, 0.05, respectively) and other common VIs tested in this study. Consequently, reNDVI, WEVI, and WNEVI can facilitate more accurate agricultural monitoring than traditional VIs.

scholarly journals Quantifying Uncertainty and Bridging the Scaling Gap in the Retrieval of Leaf Area Index by Coupling Sentinel-2 and UAV Observations

2020 ◽  
Vol 12 (11) ◽  
pp. 1843 ◽  
Author(s):  
Andrew Revill ◽  
Anna Florence ◽  
Alasdair MacArthur ◽  
Stephen Hoad ◽  
Robert Rees ◽  
...  
Keyword(s):  
Spatial Heterogeneity ◽  
Leaf Area Index ◽  
Leaf Area ◽  
Growth Stages ◽  
Two Stage ◽  
Area Index ◽  
Field Surveys ◽  
Red Edge ◽  
Calibration Approach ◽  
Sentinel 2

Leaf area index (LAI) estimates can inform decision-making in crop management. The European Space Agency’s Sentinel-2 satellite, with observations in the red-edge spectral region, can monitor crops globally at sub-field spatial resolutions (10–20 m). However, satellite LAI estimates require calibration with ground measurements. Calibration is challenged by spatial heterogeneity and scale mismatches between field and satellite measurements. Unmanned Aerial Vehicles (UAVs), generating high-resolution (cm-scale) LAI estimates, provide intermediary observations that we use here to characterise uncertainty and reduce spatial scaling discrepancies between Sentinel-2 observations and field surveys. We use a novel UAV multispectral sensor that matches Sentinel-2 spectral bands, flown in conjunction with LAI ground measurements. UAV and field surveys were conducted on multiple dates—coinciding with different wheat growth stages—that corresponded to Sentinel-2 overpasses. We compared chlorophyll red-edge index (CIred-edge) maps, derived from the Sentinel-2 and UAV platforms. We used Gaussian processes regression machine learning to calibrate a UAV model for LAI, based on ground data. Using the UAV LAI, we evaluated a two-stage calibration approach for generating robust LAI estimates from Sentinel-2. The agreement between Sentinel-2 and UAV CIred-edge values increased with growth stage—R2 ranged from 0.32 (stem elongation) to 0.75 (milk development). The CIred-edge variance between the two platforms was more comparable later in the growing season due to a more homogeneous and closed wheat canopy. The single-stage Sentinel-2 LAI calibration (i.e., direct calibration from ground measurements) performed poorly (mean R2 = 0.29, mean NRMSE = 17%) when compared to the two-stage calibration using the UAV data (mean R2 = 0.88, mean NRMSE = 8%). The two-stage approach reduced both errors and biases by >50%. By upscaling ground measurements and providing more representative model training samples, UAV observations provide an effective and viable means of enhancing Sentinel-2 wheat LAI retrievals. We anticipate that our UAV calibration approach to resolving spatial heterogeneity would enhance the retrieval accuracy of LAI and additional biophysical variables for other arable crop types and a broader range of vegetation cover types.

Red-Edge Band Vegetation Indices for Leaf Area Index Estimation From Sentinel-2/MSI Imagery

2020 ◽  
Vol 58 (2) ◽  
pp. 826-840 ◽  
Author(s):  
Yuanheng Sun ◽  
Qiming Qin ◽  
Huazhong Ren ◽  
Tianyuan Zhang ◽  
Shanshan Chen
Keyword(s):  
Leaf Area Index ◽  
Leaf Area ◽  
Vegetation Indices ◽  
Area Index ◽  
Red Edge ◽  
Index Estimation ◽  
Edge Band ◽  
Sentinel 2

scholarly journals Improved Mapping of Mountain Shrublands Using the Sentinel-2 Red-Edge Band

2019 ◽  
Vol 11 (23) ◽  
pp. 2807 ◽  
Author(s):  
Arthur Bayle ◽  
Bradley Carlson ◽  
Vincent Thierion ◽  
Marc Isenmann ◽  
Philippe Choler
Keyword(s):  
Land Cover ◽  
Vegetation Index ◽  
Normalized Difference Vegetation Index ◽  
Model Performance ◽  
Mountain Range ◽  
Rhododendron Ferrugineum ◽  
Red Edge ◽  
Rocky Habitats ◽  
Edge Band ◽  
Sentinel 2

Shrub encroachment into grassland and rocky habitats is a noticeable land cover change currently underway in temperate mountains and is a matter of concern for the sustainable management of mountain biodiversity. Current land cover products tend to underestimate the extent of mountain shrublands dominated by Ericaceae (Vaccinium spp. (species) and Rhododendron ferrugineum). In addition, mountain shrubs are often confounded with grasslands. Here, we examined the potential of anthocyanin-responsive vegetation indices to provide more accurate maps of mountain shrublands in a mountain range located in the French Alps. We relied on the multi-spectral instrument onboard the Sentinel-2A and 2B satellites and the availability of red-edge bands to calculate a Normalized Anthocyanin Reflectance Index (NARI). We used this index to quantify the autumn accumulation of anthocyanin in canopies dominated by Vaccinium spp. and Rhododendron ferrugineum and compared the effectiveness of NARI to Normalized Difference Vegetation Index (NDVI) as a basis for shrubland mapping. Photointerpretation of high-resolution aerial imagery, intensive field campaigns, and floristic surveys provided complementary data to calibrate and evaluate model performance. The proposed NARI-based model performed better than the NDVI-based model with an area under the curve (AUC) of 0.92 against 0.58. Validation of shrub cover maps based on NARI resulted in a Kappa coefficient of 0.67, which outperformed existing land cover products and resulted in a ten-fold increase in estimated area occupied by Ericaceae-dominated shrublands. We conclude that the Sentinel-2 red-edge band provides novel opportunities to detect seasonal anthocyanin accumulation in plant canopies and discuss the potential of our method to quantify long-term dynamics of shrublands in alpine and arctic contexts.

scholarly journals Estimating the Growing Stem Volume of Coniferous Plantations Based on Random Forest Using an Optimized Variable Selection Method

Sensors ◽  
2020 ◽  
Vol 20 (24) ◽  
pp. 7248
Author(s):  
Fugen Jiang ◽  
Mykola Kutia ◽  
Arbi J. Sarkissian ◽  
Hui Lin ◽  
Jiangping Long ◽  
...  
Keyword(s):  
Random Forest ◽  
Variable Selection ◽  
Texture Features ◽  
Estimation Accuracy ◽  
Stem Volume ◽  
Estimation Model ◽  
Red Edge ◽  
Variable Combination ◽  
Coniferous Plantations ◽  
Sentinel 2

Forest growing stem volume (GSV) reflects the richness of forest resources as well as the quality of forest ecosystems. Remote sensing technology enables robust and efficient GSV estimation as it greatly reduces the survey time and cost while facilitating periodic monitoring. Given its red edge bands and a short revisit time period, Sentinel-2 images were selected for the GSV estimation in Wangyedian forest farm, Inner Mongolia, China. The variable combination was shown to significantly affect the accuracy of the estimation model. After extracting spectral variables, texture features, and topographic factors, a stepwise random forest (SRF) method was proposed to select variable combinations and establish random forest regressions (RFR) for GSV estimation. The linear stepwise regression (LSR), Boruta, Variable Selection Using Random Forests (VSURF), and random forest (RF) methods were then used as references for comparison with the proposed SRF for selection of predictors and GSV estimation. Combined with the observed GSV data and the Sentinel-2 images, the distributions of GSV were generated by the RFR models with the variable combinations determined by the LSR, RF, Boruta, VSURF, and SRF. The results show that the texture features of Sentinel-2’s red edge bands can significantly improve the accuracy of GSV estimation. The SRF method can effectively select the optimal variable combination, and the SRF-based model results in the highest estimation accuracy with the decreases of relative root mean square error by 16.4%, 14.4%, 16.3%, and 10.6% compared with those from the LSR-, RF-, Boruta-, and VSURF-based models, respectively. The GSV distribution generated by the SRF-based model matched that of the field observations well. The results of this study are expected to provide a reference for GSV estimation of coniferous plantations.

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