scholarly journals Origin of Slow Spontaneous Resting-State Neuronal Fluctuations in Brain Networks

2017 ◽  
Author(s):  
Giri P. Krishnan ◽  
Oscar C. González ◽  
Maxim Bazhenov
Keyword(s):  
Computational Model ◽  
Resting State ◽  
Large Scale ◽  
Brain Activity ◽  
Brain Regions ◽  
Brain Network ◽  
Ion Concentration ◽  
Brain State ◽  
The Brain

AbstractResting or baseline state low frequency (0.01-0.2 Hz) brain activity has been observed in fMRI, EEG and LFP recordings. These fluctuations were found to be correlated across brain regions, and are thought to reflect neuronal activity fluctuations between functionally connected areas of the brain. However, the origin of these infra-slow fluctuations remains unknown. Here, using a detailed computational model of the brain network, we show that spontaneous infra-slow (< 0.05 Hz) fluctuations could originate due to the ion concentration dynamics. The computational model implemented dynamics for intra and extracellular K+ and Na+ and intracellular Cl- ions, Na+/K+ exchange pump, and KCC2 co-transporter. In the network model representing resting awake-like brain state, we observed slow fluctuations in the extracellular K+ concentration, Na+/K+ pump activation, firing rate of neurons and local field potentials. Holding K+ concentration constant prevented generation of these fluctuations. The amplitude and peak frequency of this activity were modulated by Na+/K+ pump, AMPA/GABA synaptic currents and glial properties. Further, in a large-scale network with long-range connections based on CoCoMac connectivity data, the infra-slow fluctuations became synchronized among remote clusters similar to the resting-state networks observed in vivo. Overall, our study proposes that ion concentration dynamics mediated by neuronal and glial activity may contribute to the generation of very slow spontaneous fluctuations of brain activity that are observed as the resting-state fluctuations in fMRI and EEG recordings.

scholarly journals Origin of slow spontaneous resting-state neuronal fluctuations in brain networks

2018 ◽  
Vol 115 (26) ◽  
pp. 6858-6863 ◽  
Author(s):  
Giri P. Krishnan ◽  
Oscar C. González ◽  
Maxim Bazhenov
Keyword(s):  
Computational Model ◽  
Local Field ◽  
Resting State ◽  
Large Scale ◽  
Brain Activity ◽  
Field Potential ◽  
Ion Concentration ◽  
Brain State ◽  
The Brain

Resting- or baseline-state low-frequency (0.01–0.2 Hz) brain activity is observed in fMRI, EEG, and local field potential recordings. These fluctuations were found to be correlated across brain regions and are thought to reflect neuronal activity fluctuations between functionally connected areas of the brain. However, the origin of these infra-slow resting-state fluctuations remains unknown. Here, using a detailed computational model of the brain network, we show that spontaneous infra-slow (<0.05 Hz) activity could originate due to the ion concentration dynamics. The computational model implemented dynamics for intra- and extracellular K+and Na+and intracellular Cl−ions, Na+/K+exchange pump, and KCC2 cotransporter. In the network model simulating resting awake-like brain state, we observed infra-slow fluctuations in the extracellular K+concentration, Na+/K+pump activation, firing rate of neurons, and local field potentials. Holding K+concentration constant prevented generation of the infra-slow fluctuations. The amplitude and peak frequency of this activity were modulated by the Na+/K+pump, AMPA/GABA synaptic currents, and glial properties. Further, in a large-scale network with long-range connections based on CoCoMac connectivity data, the infra-slow fluctuations became synchronized among remote clusters similar to the resting-state activity observed in vivo. Overall, our study proposes that ion concentration dynamics mediated by neuronal and glial activity may contribute to the generation of very slow spontaneous fluctuations of brain activity that are reported as the resting-state fluctuations in fMRI and EEG recordings.

scholarly journals A Graphlet-Based Topological Characterization of the Resting-State Network in Healthy People

2021 ◽  
Vol 15 ◽  
Author(s):  
Paolo Finotelli ◽  
Carlo Piccardi ◽  
Edie Miglio ◽  
Paolo Dulio
Keyword(s):  
Resting State ◽  
Brain Regions ◽  
Brain Network ◽  
Induced Subgraphs ◽  
Topological Characterization ◽  
Network Information ◽  
The Subject ◽  
Euclidean Distances ◽  
The Brain

In this paper, we propose a graphlet-based topological algorithm for the investigation of the brain network at resting state (RS). To this aim, we model the brain as a graph, where (labeled) nodes correspond to specific cerebral areas and links are weighted connections determined by the intensity of the functional magnetic resonance imaging (fMRI). Then, we select a number of working graphlets, namely, connected and non-isomorphic induced subgraphs. We compute, for each labeled node, its Graphlet Degree Vector (GDV), which allows us to associate a GDV matrix to each one of the 133 subjects of the considered sample, reporting how many times each node of the atlas “touches” the independent orbits defined by the graphlet set. We focus on the 56 independent columns (i.e., non-redundant orbits) of the GDV matrices. By aggregating their count all over the 133 subjects and then by sorting each column independently, we obtain a sorted node table, whose top-level entries highlight the nodes (i.e., brain regions) most frequently touching each of the 56 independent graphlet orbits. Then, by pairwise comparing the columns of the sorted node table in the top-k entries for various values of k, we identify sets of nodes that are consistently involved with high frequency in the 56 independent graphlet orbits all over the 133 subjects. It turns out that these sets consist of labeled nodes directly belonging to the default mode network (DMN) or strongly interacting with it at the RS, indicating that graphlet analysis provides a viable tool for the topological characterization of such brain regions. We finally provide a validation of the graphlet approach by testing its power in catching network differences. To this aim, we encode in a Graphlet Correlation Matrix (GCM) the network information associated with each subject then construct a subject-to-subject Graphlet Correlation Distance (GCD) matrix based on the Euclidean distances between all possible pairs of GCM. The analysis of the clusters induced by the GCD matrix shows a clear separation of the subjects in two groups, whose relationship with the subject characteristics is investigated.

scholarly journals Resting-state brain activity can predict target-independent aptitude in fMRI-neurofeedback training

2021 ◽  
Author(s):  
Takashi Nakano ◽  
Masahiro Takamura ◽  
Haruki Nishimura ◽  
Maro Machizawa ◽  
Naho Ichikawa ◽  
...  
Keyword(s):  
Resting State ◽  
Brain Connectivity ◽  
Brain Activity ◽  
Resting State Fmri ◽  
Brain Regions ◽  
Posterior Cingulate Cortex ◽  
Fmri Data ◽  
Independent Test ◽  
The Individual ◽  
The Brain

AbstractNeurofeedback (NF) aptitude, which refers to an individual’s ability to change its brain activity through NF training, has been reported to vary significantly from person to person. The prediction of individual NF aptitudes is critical in clinical NF applications. In the present study, we extracted the resting-state functional brain connectivity (FC) markers of NF aptitude independent of NF-targeting brain regions. We combined the data in fMRI-NF studies targeting four different brain regions at two independent sites (obtained from 59 healthy adults and six patients with major depressive disorder) to collect the resting-state fMRI data associated with aptitude scores in subsequent fMRI-NF training. We then trained the regression models to predict the individual NF aptitude scores from the resting-state fMRI data using a discovery dataset from one site and identified six resting-state FCs that predicted NF aptitude. Next we validated the prediction model using independent test data from another site. The result showed that the posterior cingulate cortex was the functional hub among the brain regions and formed predictive resting-state FCs, suggesting NF aptitude may be involved in the attentional mode-orientation modulation system’s characteristics in task-free resting-state brain activity.

scholarly journals Organization of Propagated Intrinsic Brain Activity in Individual Humans

2019 ◽  
Vol 30 (3) ◽  
pp. 1716-1734 ◽  
Author(s):  
Ryan V Raut ◽  
Anish Mitra ◽  
Scott Marek ◽  
Mario Ortega ◽  
Abraham Z Snyder ◽  
...  
Keyword(s):  
Resting State ◽  
Large Scale ◽  
Cortical Excitability ◽  
Brain Activity ◽  
Resting State Fmri ◽  
Brain Regions ◽  
Brain Organization ◽  
Individual Level ◽  
Slow Activity ◽  
Lag Structure

Abstract Spontaneous infra-slow (&lt;0.1 Hz) fluctuations in functional magnetic resonance imaging (fMRI) signals are temporally correlated within large-scale functional brain networks, motivating their use for mapping systems-level brain organization. However, recent electrophysiological and hemodynamic evidence suggest state-dependent propagation of infra-slow fluctuations, implying a functional role for ongoing infra-slow activity. Crucially, the study of infra-slow temporal lag structure has thus far been limited to large groups, as analyzing propagation delays requires extensive data averaging to overcome sampling variability. Here, we use resting-state fMRI data from 11 extensively-sampled individuals to characterize lag structure at the individual level. In addition to stable individual-specific features, we find spatiotemporal topographies in each subject similar to the group average. Notably, we find a set of early regions that are common to all individuals, are preferentially positioned proximal to multiple functional networks, and overlap with brain regions known to respond to diverse behavioral tasks—altogether consistent with a hypothesized ability to broadly influence cortical excitability. Our findings suggest that, like correlation structure, temporal lag structure is a fundamental organizational property of resting-state infra-slow activity.

scholarly journals Transient brain networks underlying interpersonal strategies during synchronized action

2020 ◽  
Author(s):  
Ole Adrian Heggli ◽  
Ivana Konvalinka ◽  
Joana Cabral ◽  
Elvira Brattico ◽  
Morten L Kringelbach ◽  
...  
Keyword(s):  
Computational Models ◽  
Brain Activity ◽  
Brain Regions ◽  
Brain Network ◽  
Human Interaction ◽  
Action Perception ◽  
Network Information ◽  
Mutual Adaptation ◽  
Underlying Mechanisms ◽  
The Brain

Abstract Interpersonal coordination is a core part of human interaction, and its underlying mechanisms have been extensively studied using social paradigms such as joint finger-tapping. Here, individual and dyadic differences have been found to yield a range of dyadic synchronization strategies, such as mutual adaptation, leading–leading, and leading–following behaviour, but the brain mechanisms that underlie these strategies remain poorly understood. To identify individual brain mechanisms underlying emergence of these minimal social interaction strategies, we contrasted EEG-recorded brain activity in two groups of musicians exhibiting the mutual adaptation and leading–leading strategies. We found that the individuals coordinating via mutual adaptation exhibited a more frequent occurrence of phase-locked activity within a transient action–perception-related brain network in the alpha range, as compared to the leading–leading group. Furthermore, we identified parietal and temporal brain regions that changed significantly in the directionality of their within-network information flow. Our results suggest that the stronger weight on extrinsic coupling observed in computational models of mutual adaptation as compared to leading–leading might be facilitated by a higher degree of action–perception network coupling in the brain.

scholarly journals Loss of integration of brain networks after sleep deprivation relates to the worsening of cognitive functions

2020 ◽  
Author(s):  
Pesoli Matteo ◽  
Rucco Rosaria ◽  
Liparoti Marianna ◽  
Lardone Anna ◽  
D’Aurizio Giula ◽  
...  
Keyword(s):  
Sleep Deprivation ◽  
Resting State ◽  
Large Scale ◽  
Brain Networks ◽  
Brain Network ◽  
Cognitive Tasks ◽  
Functional Networks ◽  
Long Sleep ◽  
Before And After ◽  
The Brain

AbstractThe topology of brain networks changes according to environmental demands and can be described within the framework of graph theory. We hypothesized that 24-hours long sleep deprivation (SD) causes functional rearrangements of the brain topology so as to impair optimal communication, and that such rearrangements relate to the performance in specific cognitive tasks, namely the ones specifically requiring attention. Thirty-two young men underwent resting-state MEG recording and assessments of attention and switching abilities before and after SD. We found loss of integration of brain network and a worsening of attention but not of switching abilities. These results show that brain network changes due to SD affect switching abilities, worsened attention and induce large-scale rearrangements in the functional networks.

scholarly journals Heterogeneity of EEG resting-state brain networks in absolute pitch

2020 ◽  
Author(s):  
Marielle Greber ◽  
Carina Klein ◽  
Simon Leipold ◽  
Silvano Sele ◽  
Lutz Jäncke
Keyword(s):  
Functional Connectivity ◽  
Auditory Cortex ◽  
Resting State ◽  
Large Scale ◽  
Absolute Pitch ◽  
Brain Regions ◽  
Brain Network ◽  
Higher Order ◽  
Neural Basis ◽  
Whole Brain

AbstractThe neural basis of absolute pitch (AP), the ability to effortlessly identify a musical tone without an external reference, is poorly understood. One of the key questions is whether perceptual or cognitive processes underlie the phenomenon as both sensory and higher-order brain regions have been associated with AP. One approach to elucidate the neural underpinnings of a specific expertise is the examination of resting-state networks.Thus, in this paper, we report a comprehensive functional network analysis of intracranial resting-state EEG data in a large sample of AP musicians (n = 54) and non-AP musicians (n = 51). We adopted two analysis approaches: First, we applied an ROI-based analysis to examine the connectivity between the auditory cortex and the dorsolateral prefrontal cortex (DLPFC) using several established functional connectivity measures. This analysis is a replication of a previous study which reported increased connectivity between these two regions in AP musicians. Second, we performed a whole-brain network-based analysis on the same functional connectivity measures to gain a more complete picture of the brain regions involved in a possibly large-scale network supporting AP ability.In our sample, the ROI-based analysis did not provide evidence for an AP-specific connectivity increase between the auditory cortex and the DLPFC. In contrast, the whole-brain analysis revealed three networks with increased connectivity in AP musicians comprising nodes in frontal, temporal, subcortical, and occipital areas. Commonalities of the networks were found in both sensory and higher-order brain regions of the perisylvian area. Further research will be needed to confirm these exploratory results.

scholarly journals Quantifying differences between passive and task-evoked intrinsic functional connectivity in a large-scale brain simulation

2018 ◽  
Author(s):  
Antonio Ulloa ◽  
Barry Horwitz
Keyword(s):  
Computational Model ◽  
Resting State ◽  
Short Term Memory ◽  
Brain Activity ◽  
Brain Regions ◽  
Intrinsic Activity ◽  
Task Execution ◽  
Short Term ◽  
Visual Short Term Memory ◽  
And Task

AbstractEstablishing a connection between intrinsic and task-evoked brain activity is critical because it would provide a way to map task-related brain regions in patients unable to comply with such tasks. A crucial question within this realm is to what extent the execution of a cognitive task affects the intrinsic activity of brain regions not involved in the task. Computational models can be useful to answer this question because they allow us to distinguish task from non-task neural elements while giving us the effects of task execution on non-task regions of interest at the neuroimaging level. The quantification of those effects in a computational model would represent a step towards elucidating the intrinsic versus task-evoked connection. Here we used computational modeling and graph theoretical metrics to quantify changes in intrinsic functional brain connectivity due to task execution. We used our Large-Scale Neural Modeling framework to embed a computational model of visual short-term memory into an empirically derived connectome. We simulated a neuroimaging study consisting of ten subjects performing passive fixation (PF), passive viewing (PV) and delay match-to-sample (DMS) tasks. We used the simulated BOLD fMRI time-series to calculate functional connectivity (FC) matrices and used those matrices to compute several graph theoretical measures. After determining that the simulated graph theoretical measures were largely consistent with experiments, we were able to quantify the differences between the graph metrics of the PF condition and those of the PV and DMS conditions. Thus, we show that we can use graph theoretical methods applied to simulated brain networks to aid in the quantification of changes in intrinsic brain functional connectivity during task execution. Our results represent a step towards establishing a connection between intrinsic and task-related brain activity.Author SummaryStudies of resting-state conditions are popular in neuroimaging. Participants in resting-state studies are instructed to fixate on a neutral image or to close their eyes. This type of study has advantages over traditional task-based studies, including its ability to allow participation of those with difficulties performing tasks. Further, a resting-state neuroimaging study reveals intrinsic activity of participants’ brains. However, task-related brain activity may change this intrinsic activity, much as a stone thrown in a lake causes ripples on the water’s surface. Can we measure those activity changes? To answer that question, we merged a computational model of visual short-term memory (task regions) with an anatomical model incorporating major connections between brain regions (non-task regions). In a computational model, unlike real data, we know how different regions are connected and which regions are doing the task. First, we simulated neuronal and neuroimaging activity of both task and non-task regions during three conditions: passive fixation (baseline), passive viewing, and visual short-term memory. Then, applying graph theory to the simulated neuroimaging of non-task regions, we computed differences between the baseline and the other conditions. Our results show that we can measure changes in non-task regions due to brain activity changes in task-related regions.

scholarly journals Identifying optimal working points of individual Virtual Brains: A large-scale brain network modelling study

2020 ◽  
Author(s):  
Paul Triebkorn ◽  
Joelle Zimmermann ◽  
Leon Stefanovski ◽  
Dipanjan Roy ◽  
Ana Solodkin ◽  
...  
Keyword(s):  
Functional Connectivity ◽  
Brain Function ◽  
Large Scale ◽  
Brain Activity ◽  
Brain Network ◽  
Model Parameters ◽  
Network Modelling ◽  
Neural Populations ◽  
Global Coupling ◽  
The Brain

AbstractUsing The Virtual Brain (TVB, thevirtualbrian.org) simulation platform, we explored for 50 individual adult human brains (ages 18-80), how personalized connectome based brain network modelling captures various empirical observations as measured by functional magnetic resonance imaging (fMRI) and electroencephalography (EEG). We compare simulated activity based on individual structural connectomes (SC) inferred from diffusion weighted imaging with fMRI and EEG in the resting state. We systematically explore the role of the following model parameters: conduction velocity, global coupling and graph theoretical features of individual SC. First, a subspace of the parameter space is identified for each subject that results in realistic brain activity, i.e. reproducing the following prominent features of empirical EEG-fMRI activity: topology of resting-state fMRI functional connectivity (FC), functional connectivity dynamics (FCD), electrophysiological oscillations in the delta (3-4 Hz) and alpha (8-12 Hz) frequency range and their bimodality, i.e. low and high energy modes. Interestingly, FCD fit, bimodality and static FC fit are highly correlated. They all show their optimum in the same range of global coupling. In other words, only when our local model is in a bistable regime we are able to generate switching of modes in our global network. Second, our simulations reveal the explicit network mechanisms that lead to electrophysiological oscillations, their bimodal behaviour and inter-regional differences. Third, we discuss biological interpretability of the Stefanescu-Jirsa-Hindmarsh-Rose-3D model when embedded inside the large-scale brain network and mechanisms underlying the emergence of bimodality of the neural signal.With the present study, we set the cornerstone for a systematic catalogue of spatiotemporal brain activity regimes generated with the connectome-based brain simulation platform The Virtual Brain.Author SummaryIn order to understand brain dynamics we use numerical simulations of brain network models. Combining the structural backbone of the brain, that is the white matter fibres connecting distinct regions in the grey matter, with dynamical systems describing the activity of neural populations we are able to simulate brain function on a large scale. In order to make accurate prediction with this network, it is crucial to determine optimal model parameters. We here use an explorative approach to adjust model parameters to individual brain activity, showing that subjects have their own optimal point in the parameter space, depending on their brain structure and function. At the same time, we investigate the relation between bistable phenomena on the scale of neural populations and the changed in functional connectivity on the brain network scale. Our results are important for future modelling approaches trying to make accurate predictions of brain function.

scholarly journals Macroscopic quantities of collective brain activity during wakefulness and anesthesia

2021 ◽  
Author(s):  
Adrián Ponce-Alvarez ◽  
Lynn Uhrig ◽  
Nikolas Deco ◽  
Camilo M. Signorelli ◽  
Morten L. Kringelbach ◽  
...  
Keyword(s):  
Brain Activity ◽  
Brain Regions ◽  
Brain State ◽  
Loss Of Consciousness ◽  
Information Theoretic ◽  
Maximum Entropy Models ◽  
Information Theoretic Measures ◽  
Brain States ◽  
Parietal Cortices ◽  
The Brain

AbstractThe study of states of arousal is key to understand the principles of consciousness. Yet, how different brain states emerge from the collective activity of brain regions remains unknown. Here, we studied the fMRI brain activity of monkeys during wakefulness and anesthesia-induced loss of consciousness. Using maximum entropy models, we derived collective, macroscopic properties that quantify the system’s capabilities to produce work, to contain information and to transmit it, and that indicate a phase transition from critical awake dynamics to supercritical anesthetized states. Moreover, information-theoretic measures identified those parameters that impacted the most the network dynamics. We found that changes in brain state and in state of consciousness primarily depended on changes in network couplings of insular, cingulate, and parietal cortices. Our findings suggest that the brain state transition underlying the loss of consciousness is predominantly driven by the uncoupling of specific brain regions from the rest of the network.

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