scholarly journals Resting-state brain activity can predict target-independent aptitude in fMRI-neurofeedback training

2021 ◽  
Author(s):  
Takashi Nakano ◽  
Masahiro Takamura ◽  
Haruki Nishimura ◽  
Maro Machizawa ◽  
Naho Ichikawa ◽  
...  
Keyword(s):  
Resting State ◽  
Brain Connectivity ◽  
Brain Activity ◽  
Resting State Fmri ◽  
Brain Regions ◽  
Posterior Cingulate Cortex ◽  
Fmri Data ◽  
Independent Test ◽  
The Individual ◽  
The Brain

AbstractNeurofeedback (NF) aptitude, which refers to an individual’s ability to change its brain activity through NF training, has been reported to vary significantly from person to person. The prediction of individual NF aptitudes is critical in clinical NF applications. In the present study, we extracted the resting-state functional brain connectivity (FC) markers of NF aptitude independent of NF-targeting brain regions. We combined the data in fMRI-NF studies targeting four different brain regions at two independent sites (obtained from 59 healthy adults and six patients with major depressive disorder) to collect the resting-state fMRI data associated with aptitude scores in subsequent fMRI-NF training. We then trained the regression models to predict the individual NF aptitude scores from the resting-state fMRI data using a discovery dataset from one site and identified six resting-state FCs that predicted NF aptitude. Next we validated the prediction model using independent test data from another site. The result showed that the posterior cingulate cortex was the functional hub among the brain regions and formed predictive resting-state FCs, suggesting NF aptitude may be involved in the attentional mode-orientation modulation system’s characteristics in task-free resting-state brain activity.

scholarly journals High spatial correlation in brain connectivity between micturition and resting states within bladder-related networks using 7 T MRI in multiple sclerosis women with voiding dysfunction

2021 ◽  
Author(s):  
Zhaoyue Shi ◽  
Khue Tran ◽  
Christof Karmonik ◽  
Timothy Boone ◽  
Rose Khavari
Keyword(s):  
Multiple Sclerosis ◽  
Resting State ◽  
Voiding Dysfunction ◽  
Brain Connectivity ◽  
Resting State Fmri ◽  
Brain Regions ◽  
Functional Magnetic Resonance ◽  
Non Invasive ◽  
Potential Alternative ◽  
The Brain

Abstract Background Several studies have reported brain activations and functional connectivity (FC) during micturition using functional magnetic resonance imaging (fMRI) and concurrent urodynamics (UDS) testing. However, due to the invasive nature of UDS procedure, non-invasive resting-state fMRI is being explored as a potential alternative. The purpose of this study is to evaluate the feasibility of utilizing resting states as a non-invasive alternative for investigating the bladder-related networks in the brain. Methods We quantitatively compared FC in brain regions belonging to the bladder-related network during the following states: ‘strong desire to void’, ‘voiding initiation (or attempt at voiding initiation)’, and ‘voiding (or continued attempt of voiding)’ with FC during rest in nine multiple sclerosis women with voiding dysfunction using fMRI data acquired at 7 T and 3 T. Results The inter-subject correlation analysis showed that voiding (or continued attempt of voiding) is achieved through similar network connections in all subjects. The task-based bladder-related network closely resembles the resting-state intrinsic network only during voiding (or continued attempt of voiding) process but not at other states. Conclusion Resting states fMRI can be potentially utilized to accurately reflect the voiding (or continued attempt of voiding) network. Concurrent UDS testing is still necessary for studying the effects of strong desire to void and initiation of voiding (or attempt at initiation of voiding).

scholarly journals Decreased Intrinsic Neural Timescales in Mesial Temporal Lobe Epilepsy

2021 ◽  
Vol 15 ◽  
Author(s):  
Kefan Wang ◽  
Xiaonan Zhang ◽  
Chengru Song ◽  
Keran Ma ◽  
Man Bai ◽  
...  
Keyword(s):  
Temporal Lobe Epilepsy ◽  
Resting State ◽  
Brain Activity ◽  
Resting State Fmri ◽  
Mesial Temporal Lobe Epilepsy ◽  
Fmri Data ◽  
Healthy Controls ◽  
Neural Signals ◽  
Mesial Temporal Lobe ◽  
The Brain

It is well established that epilepsy is characterized by the destruction of the information capacity of brain network and the interference with information processing in regions outside the epileptogenic focus. However, the potential mechanism remains poorly understood. In the current study, we applied a recently proposed approach on the basis of resting-state fMRI data to measure altered local neural dynamics in mesial temporal lobe epilepsy (mTLE), which represents how long neural information is stored in a local brain area and reflect an ability of information integration. Using resting-state-fMRI data recorded from 36 subjects with mTLE and 36 healthy controls, we calculated the intrinsic neural timescales (INT) of neural signals by summing the positive magnitude of the autocorrelation of the resting-state brain activity. Compared to healthy controls, the INT values were significantly lower in patients in the right orbitofrontal cortices, right insula, and right posterior lobe of cerebellum. Whereas, we observed no statistically significant changes between patients with long- and short-term epilepsy duration or between left-mTLE and right-mTLE. Our study provides distinct insight into the brain abnormalities of mTLE from the perspective of the dynamics of the brain activity, highlighting the significant role of intrinsic timescale in understanding neurophysiological mechanisms. And we postulate that altered intrinsic timescales of neural signals in specific cortical brain areas may be the neurodynamic basis of cognitive impairment and emotional comorbidities in mTLE patients.

Functional MRI

2018 ◽  
Keyword(s):  
Functional Mri ◽  
Resting State ◽  
Brain Activity ◽  
Low Frequency ◽  
Resting State Fmri ◽  
Blood Oxygen Level Dependent ◽  
Brain Regions ◽  
Functional Brain Imaging ◽  
Fmri Signal ◽  
The Brain

Functional MRI with BOLD (Blood Oxygen Level Dependent) imaging is one of the commonly used modalities for studying brain function in neuroscience. The underlying source of the BOLD fMRI signal is the variation in oxyhemoglobin to deoxyhemoglobin ratio at the site of neuronal activity in the brain. fMRI is mostly used to map out the location and intensity of brain activity that correlate with mental activities. In recent years, a new approach to fMRI was developed that is called resting-state fMRI. The fMRI signal from this method does not require the brain to perform any goal-directed task; it is acquired with the subject at rest. It was discovered that there are low-frequency fluctuations in the fMRI signal in the brain at rest. The signals originate from spatially distinct functionally related brain regions but exhibit coherent time-synchronous fluctuations. Several of the networks have been identified and are called resting-state networks. These networks represent the strength of the functional connectivity between distinct functionally related brain regions and have been used as imaging markers of various neurological and psychiatric diseases. Resting-state fMRI is also ideally suited for functional brain imaging in disorders of consciousness and in subjects under anesthesia. This book provides a review of the basic principles of fMRI (signal sources, acquisition methods, and data analysis) and its potential clinical applications.

Brain kernel: a new spatial covariance function for fMRI data

2021 ◽  
Author(s):  
Anqi Wu ◽  
Samuel A. Nastase ◽  
Christopher A Baldassano ◽  
Nicholas B Turk-Browne ◽  
Kenneth A. Norman ◽  
...  
Keyword(s):  
Covariance Function ◽  
Brain Activity ◽  
Activity Patterns ◽  
Bilateral Symmetry ◽  
Resting State Fmri ◽  
Brain Regions ◽  
Fmri Data ◽  
Spatial Covariance ◽  
Spatial Correlation Structure ◽  
The Brain

A key problem in functional magnetic resonance imaging (fMRI) is to estimate spatial activity patterns from noisy high-dimensional signals. Spatial smoothing provides one approach to regularizing such estimates. However, standard smoothing methods ignore the fact that correlations in neural activity may fall off at different rates in different brain areas, or exhibit discontinuities across anatomical or functional boundaries. Moreover, such methods do not exploit the fact that widely separated brain regions may exhibit strong correlations due to bilateral symmetry or the network organization of brain regions. To capture this non-stationary spatial correlation structure, we introduce the brain kernel, a continuous covariance function for whole-brain activity patterns. We define the brain kernel in terms of a continuous nonlinear mapping from 3D brain coordinates to a latent embedding space, parametrized with a Gaussian process (GP). The brain kernel specifies the prior covariance between voxels as a function of the distance between their locations in embedding space. The GP mapping warps the brain nonlinearly so that highly correlated voxels are close together in latent space, and uncorrelated voxels are far apart. We estimate the brain kernel using resting-state fMRI data, and we develop an exact, scalable inference method based on block coordinate descent to overcome the challenges of high dimensionality (10-100K voxels). Finally, we illustrate the brain kernel's usefulness with applications to brain decoding and factor analysis with multiple task-based fMRI datasets.

PHASE SYNCHRONIZATION IN BRAIN NETWORKS DERIVED FROM CORRELATION BETWEEN PROBABILITIES OF RECURRENCES IN FUNCTIONAL MRI DATA

2013 ◽  
Vol 23 (02) ◽  
pp. 1350003 ◽  
Author(s):  
D. RANGAPRAKASH ◽  
XIAOPING HU ◽  
GOPIKRISHNA DESHPANDE
Keyword(s):  
Linear Correlation ◽  
Resting State ◽  
Brain Function ◽  
Phase Synchronization ◽  
Human Subjects ◽  
Brain Connectivity ◽  
Brain Networks ◽  
Resting State Fmri ◽  
Brain Regions ◽  
Fmri Data

It is increasingly being recognized that resting state brain connectivity derived from functional magnetic resonance imaging (fMRI) data is an important marker of brain function both in healthy and clinical populations. Though linear correlation has been extensively used to characterize brain connectivity, it is limited to detecting first order dependencies. In this study, we propose a framework where in phase synchronization (PS) between brain regions is characterized using a new metric "correlation between probabilities of recurrence" (CPR) and subsequent graph-theoretic analysis of the ensuing networks. We applied this method to resting state fMRI data obtained from human subjects with and without administration of propofol anesthetic. Our results showed decreased PS during anesthesia and a biologically more plausible community structure using CPR rather than linear correlation. We conclude that CPR provides an attractive nonparametric method for modeling interactions in brain networks as compared to standard correlation for obtaining physiologically meaningful insights about brain function.

scholarly journals Spatiotemporal Trajectories in Resting-state FMRI Revealed by Convolutional Variational Autoencoder

2021 ◽  
Author(s):  
Xiaodi Zhang ◽  
Eric Maltbie ◽  
Shella Keilholz
Keyword(s):  
Functional Connectivity ◽  
Resting State ◽  
Brain Activity ◽  
Resting State Fmri ◽  
Spatiotemporal Patterns ◽  
Network Activity ◽  
Fmri Data ◽  
Variational Autoencoder ◽  
Spatiotemporal Trajectories ◽  
The Brain

AbstractRecent resting-state fMRI studies have shown that brain activity exhibits temporal variations in functional connectivity by using various approaches including sliding window correlation, co-activation patterns, independent component analysis, quasi-periodic patterns, and hidden Markov models. These methods often model the brain activity as a discretized hopping among several brain states that are defined by the spatial configurations of network activity. However, the discretized states are merely a simplification of what is likely to be a continuous process, where each network evolves over time following its unique path. To model these characteristic spatiotemporal trajectories, we trained a variational autoencoder using rs-fMRI data and evaluated the spatiotemporal features of the latent variables obtained from the trained networks. Our results suggest that there are a relatively small number of approximately orthogonal whole-brain spatiotemporal patterns that capture the most prominent features of rs-fMRI data, which can serve as the building blocks to construct all possible spatiotemporal dynamics in resting state fMRI. These spatiotemporal patterns provide insight into how activity flows across the brain in concordance with known network structures and functional connectivity gradients.

Basic Principles of Functional MRI

2018 ◽  
pp. 20-29
Author(s):  
Cheuk Ying Tang
Keyword(s):  
Functional Mri ◽  
Resting State ◽  
Brain Activity ◽  
Low Frequency ◽  
Resting State Fmri ◽  
Brain Regions ◽  
Functional Brain Imaging ◽  
Basic Principles ◽  
Fmri Signal ◽  
The Brain

Blood oxygen level dependent (BOLD) MRI, also called functional MRI (fMRI), is one of the most widely used modalities for studying brain function. The underlying source of the fMRI signal is blood flow and the oxygenation state of hemoglobin. fMRI is mostly used to map out the location and intensity of brain activity that correlate with mental activities. In recent years, a new approach to fMRI has been developed that is called resting-state fMRI. The fMRI signal from this method does not require the brain to perform a goal-directed task; it is acquired with the subject at rest. It was discovered that there are low-frequency fluctuations in the fMRI signal in the brain at rest. These signals come from spatially distinct brain regions but exhibit coherent, time-synchronous fluctuations. Several of the networks have been identified and are called resting-state networks. The networks represent the strength of the functional connectivity between distinct brain regions and have been used as imaging biomarkers for various neurological and psychiatric diseases. Resting-state fMRI is also ideally suited for functional brain imaging in disorders of consciousness and in subjects under anesthesia. In this chapter, we provide an introductory review of the basic principles of fMRI: signal sources, acquisition methods, and data analysis.

Distinguishing hypochondriasis and schizophrenia using regional homogeneity: a resting-state fMRI study and support vector machine analysis

2021 ◽  
pp. 1-29
Author(s):  
Kangyu Jin ◽  
Zhe Shen ◽  
Guoxun Feng ◽  
Zhiyong Zhao ◽  
Jing Lu ◽  
...  
Keyword(s):  
Cognitive Function ◽  
Resting State ◽  
Parietal Lobe ◽  
Brain Activity ◽  
Resting State Fmri ◽  
Brain Regions ◽  
Regional Homogeneity ◽  
Middle Temporal Gyrus ◽  
Support Vector ◽  
Fmri Study

Abstract Objective: A few former studies suggested there are partial overlaps in abnormal brain structure and cognitive function between Hypochondriasis (HS) and schizophrenia (SZ). But their differences in brain activity and cognitive function were unclear. Methods: 21 HS patients, 23 SZ patients, and 24 healthy controls (HC) underwent Resting-state functional magnetic resonance imaging (rs-fMRI) with the regional homogeneity analysis (ReHo), subsequently exploring the relationship between ReHo value and cognitive functions. The support vector machines (SVM) were used on effectiveness evaluation of ReHo for differentiating HS from SZ. Results: Compared with HC, HS showed significantly increased ReHo values in right middle temporal gyrus (MTG), left inferior parietal lobe (IPL) and right fusiform gyrus (FG), while SZ showed increased ReHo in left insula, decreased ReHo values in right paracentral lobule. Additionally, HS showed significantly higher ReHo values in FG, MTG and left paracentral lobule but lower in insula than SZ. The higher ReHo values in insula were associated with worse performance in MCCB in HS group. SVM analysis showed a combination of the ReHo values in insula and FG was able to satisfactorily distinguish the HS and SZ patients. Conclusion: our results suggested the altered default mode network (DMN), of which abnormal spontaneous neural activity occurs in multiple brain regions, might play a key role in the pathogenesis of HS, and the resting-state alterations of insula closely related to cognitive dysfunction in HS. Furthermore, the combination of the ReHo in FG and insula was a relatively ideal indicator to distinguish HS from SZ.

scholarly journals Wrist and finger motor representations embedded in the cerebral and cerebellar resting-state activation

2021 ◽  
Author(s):  
Toshiki Kusano ◽  
Hiroki Kurashige ◽  
Isao Nambu ◽  
Yoshiya Moriguchi ◽  
Takashi Hanakawa ◽  
...  
Keyword(s):  
Resting State ◽  
Brain Activity ◽  
Body Part ◽  
Resting State Fmri ◽  
Body Parts ◽  
Finger Movements ◽  
Multiple Components ◽  
Brain Activity Pattern ◽  
Motor Representations ◽  
The Brain

AbstractSeveral functional magnetic resonance imaging (fMRI) studies have demonstrated that resting-state brain activity consists of multiple components, each corresponding to the spatial pattern of brain activity induced by performing a task. Especially in a movement task, such components have been shown to correspond to the brain activity pattern of the relevant anatomical region, meaning that the voxels of pattern that are cooperatively activated while using a body part (e.g., foot, hand, and tongue) also behave cooperatively in the resting state. However, it is unclear whether the components involved in resting-state brain activity correspond to those induced by the movement of discrete body parts. To address this issue, in the present study, we focused on wrist and finger movements in the hand, and a cross-decoding technique trained to discriminate between the multi-voxel patterns induced by wrist and finger movement was applied to the resting-state fMRI. We found that the multi-voxel pattern in resting-state brain activity corresponds to either wrist or finger movements in the motor-related areas of each hemisphere of the cerebrum and cerebellum. These results suggest that resting-state brain activity in the motor-related areas consists of the components corresponding to the elementary movements of individual body parts. Therefore, the resting-state brain activity possibly has a finer structure than considered previously.

Sign in / Sign up

Export Citation Format

Share Document