scholarly journals Water and phosphorus uptake by upland rice root systems unraveled under multiple scenarios: linking a 3D soil-root model and data

2020 ◽  
Author(s):  
Trung Hieu Mai ◽  
Pieterjan De Bauw ◽  
Andrea Schnepf ◽  
Roel Merckx ◽  
Erik Smolders ◽  
...  

AbstractBackground and aimsUpland rice is often grown where water and phosphorus (P) are limited and these two factors interact on P bioavailability. To better understand this interaction, mechanistic models representing small-scale nutrient gradients and water dynamics in the rhizosphere of full-grown root systems are needed.MethodsRice was grown in large columns using a P-deficient soil at three different P supplies in the topsoil (deficient, suboptimal, non-limiting) in combination with two water regimes (field capacity versus drying periods). Root architectural parameters and P uptake were determined. Using a multiscale model of water and nutrient uptake, in-silico experiments were conducted by mimicking similar P and water treatments. First, 3D root systems were reconstructed by calibrating an architecure model with observed phenological root data, such as nodal root number, lateral types, interbranch distance, root diameters, and root biomass allocation along depth. Secondly, the multiscale model was informed with these 3D root architectures and the actual transpiration rates. Finally, water and P uptake were simulated.Key resultsThe plant P uptake increased over threefold by increasing P and water supply, and drying periods reduced P uptake at high but not at low P supply. Root architecture was significantly affected by the treatments. Without calibration, simulation results adequately predicted P uptake, including the different effects of drying periods on P uptake at different P levels. However, P uptake was underestimated under P deficiency, a process likely related to an underestimated affinity of P uptake transporters in the roots. Both types of laterals (i.e. S- and L-type) are shown to be highly important for both water and P uptake, and the relative contribution of each type depend on both soil P availability and water dynamics. Key drivers in P uptake are growing root tips and the distribution of laterals.ConclusionsThis model-data integration demonstrates how multiple co-occurring single root phene responses to environmental stressors contribute to the development of a more efficient root system. Further model improvements such as the use of Michaelis constants from buffered systems and the inclusion of mycorrhizal infections and exudates are proposed.

2020 ◽  
Vol 126 (4) ◽  
pp. 789-806 ◽  
Author(s):  
Pieterjan De Bauw ◽  
Trung Hieu Mai ◽  
Andrea Schnepf ◽  
Roel Merckx ◽  
Erik Smolders ◽  
...  

Abstract Background and Aims Upland rice is often grown where water and phosphorus (P) are limited. To better understand the interaction between water and P availability, functional–structural models that mechanistically represent small-scale nutrient gradients and water dynamics in the rhizosphere are needed. Methods Rice was grown in large columns using a P-deficient soil at three P supplies in the topsoil (deficient, sub-optimal and non-limiting) in combination with two water regimes (field capacity vs. drying periods). Root system characteristics, such as nodal root number, lateral types, interbranch distance, root diameters and the distribution of biomass with depth, as well as water and P uptake, were measured. Based on the observed root data, 3-D root systems were reconstructed by calibrating the structural architecure model CRootBox for each scenario. Water flow and P transport in the soil to each of the individual root segments of the generated 3-D root architectures were simulated using a multiscale flow and transport model. Total water and P uptake were then computed by adding up the uptake by all the root segments. Key Results Measurements showed that root architecture was significantly affected by the treatments. The moist, high P scenario had 2.8 times the root mass, double the number of nodal roots and more S-type laterals than the dry, low P scenario. Likewise, measured plant P uptake increased >3-fold by increasing P and water supply. However, drying periods reduced P uptake at high but not at low P supply. Simulation results adequately predicted P uptake in all scenarios when the Michaelis–Menten constant (Km) was corrected for diffusion limitation. They showed that the key drivers for P uptake are the different types of laterals (i.e. S- and L-type) and growing root tips. The L-type laterals become more important for overall water and P uptake than the S-type laterals in the dry scenarios. This is true across all the P treatments, but the effect is more pronounced as the P availability decreases. Conclusions This functional–structural model can predict the function of specific rice roots in terms of P and water uptake under different P and water supplies, when the structure of the root system is known. A future challenge is to predict how the structure root systems responds to nutrient and water availability.


2021 ◽  
Author(s):  
Xiucheng Liu ◽  
Yuting Wang ◽  
Shuangri Liu ◽  
Miao Liu

Abstract Aims Phosphorus (P) availability and efficiency are especially important for plant growth and productivity. However, the sex-specific P acquisition and utilization strategies of dioecious plant species under different N forms are not clear. Methods This study investigated the responsive mechanisms of dioecious Populus cathayana females and males based on P uptake and allocation to soil P supply under N deficiency, nitrate (NO3 −) and ammonium (NH4 +) supply. Important Findings Females had a greater biomass, root length density (RLD), specific root length (SRL) and shoot P concentration than males under normal P availability with two N supplies. NH4 + supply led to higher total root length, RLD and SRL but lower root tip number than NO3 − supply under normal P supply. Under P deficiency, males showed a smaller root system but greater photosynthetic P availability and higher leaf P remobilization, exhibiting a better capacity to adaptation to P-deficiency than females. Under P deficiency, NO3 − supply increased leaf photosynthesis and PUE but reduced RLD and SRL in females while males had higher leaf P redistribution and photosynthetic PUE than NH4 + supply. Females had a better potentiality to cope with P deficiency under NO3 − supply than NH4 + supply; the contrary was true for males. These results suggest that females may devote to increase in P uptake and shoot P allocation under normal P availability, especially under NO3 − supply, while males adopt more efficient resource use and P remobilization to maximum their tolerance to P-deficiency.


2021 ◽  
Vol 12 ◽  
Author(s):  
Leangsrun Chea ◽  
Ana Meijide ◽  
Catharina Meinen ◽  
Elke Pawelzik ◽  
Marcel Naumann

The limited availability of phosphorus (P) in soils causes a major constraint in the productivity of potatoes, which requires increased knowledge of plant adaptation responses in this condition. In this study, six potato cultivars, namely, Agria, Lady Claire, Milva, Lilly, Sieglinde, and Verdi, were assessed for their responses on plant growth, leaf physiology, P use efficiency (PUE), and tuber quality with three P levels (Plow, Pmed, and Phigh). The results reveal a significant variation in the cultivars in response to different P availabilities. P-efficient cultivars, Agria, Milva, and Lilly, possessed substantial plant biomass, tuber yield, and high P uptake efficiency (PUpE) under low P supply conditions. The P-inefficient cultivars, Lady Claire, Sieglinde, and Verdi, could not produce tubers under P deprivation conditions, as well as the ability to efficiently uptake P under low-level conditions, but they were efficient in P uptake under high soil P conditions. Improved PUpE is important for plant tolerance with limited P availability, which results in the efficient use of the applied P. At the leaf level, increased accumulations of nitrate, sulfate, sucrose, and proline are necessary for a plant to acclimate to P deficiency-induced stress and to mobilize leaf inorganic phosphate to increase internal PUE and photosynthesis. The reduction in plant biomass and tuber yield under P-deficient conditions could be caused by reduced CO2 assimilation. Furthermore, P deficiency significantly reduced tuber yield, dry matter, and starch concentration in Agria, Milva, and Lilly. However, contents of tuber protein, sugars, and minerals, as well as antioxidant capacity, were enhanced under these conditions in these cultivars. These results highlight the important traits contributing to potato plant tolerance under P-deficient conditions and indicate an opportunity to improve the P efficiency and tuber quality of potatoes under deficient conditions using more efficient cultivars. Future research to evaluate molecular mechanisms related to P and sucrose translocation, and minimize tuber yield reduction under limited P availability conditions is necessary.


2019 ◽  
Vol 99 (3) ◽  
pp. 292-304
Author(s):  
Tandra D. Fraser ◽  
Derek H. Lynch ◽  
Ivan P. O’Halloran ◽  
R. Paul Voroney ◽  
Martin H. Entz ◽  
...  

Soil phosphorus (P) availability may be impacted by management practices, thereby affecting plant P uptake and plant response to P amendments. The aim of this study was to determine the effects of long-term management on soil P pools and to assess the response of P bioavailability, plant growth, and P uptake to mineral versus manure P treatments. Soils were collected from plots under organic (ORG), organic with composted manure (ORG + M), conventional (CONV), and restored prairie (PRA) management. Italian ryegrass (Lolium multiflorum L.) seedlings were grown in the greenhouse for 106 d in soils amended with various rates of manure or mineral P. The ORG soil had lower concentrations of labile P (resin-P and NaHCO3-P) compared with the CONV and PRA soils, as determined by sequential P fractionation prior to planting. Ryegrass biomass (root + shoot) and shoot P uptake from soils receiving no P were significantly lower for the ORG than all other management systems. Although apparent P use efficiency of the whole plant was increased by low P rate in the ORG management system, the source of applied P, manure > mineral, only influenced Olsen test P.


2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Danilo Silva Almeida ◽  
Lucas Benes Delai ◽  
Alexandra Christine Helena Franklan Sawaya ◽  
Ciro Antonio Rosolem

Abstract It has been suggested that some tropical grasses can acquire phosphorus (P) from hematite and gypsite by exuding organic acid anions (OAs). However, it remains to be determined exactly which OAs could be involved in each case. The objective of this study was to verify the exudation OAs by ruzigrass (Urochloa ruziziensis), palisade grass (U. brizantha), and Guinea grass (Megathyrsus maximus) as a response to P deficiency. The grasses were grown in leachate columns with adequate and deficient P nutrient solutions. The concentration of OAs in the leacheate and root surface, as well as shoot and root dry matter, and P uptake were determined. Citrate, isocitrate, and malate concentration in leachates and root surfaces increased with P starvation, mainly for the Urochloa grasses. Oxalate exudation was similar for the grasses under adequate P supply, but was lower in Guinea grass under P starvation. Palisade grass showed a higher concentration of total OAs in the root surface than the other species due to a great production of oxalate and isocitrate. Palisade grass showed greater dry matter yields regardless of P deficiency, and Guinea grass always had the higher shoot:root ratio. Urochloa grasses have a higher capacity to cope with low P availability by exuding OAs along with a lower shoot:root ratio than Guinea grass.


Soil Research ◽  
2020 ◽  
Vol 58 (3) ◽  
pp. 289
Author(s):  
L. B. Braos ◽  
A. C. T. Bettiol ◽  
L. G. Di Santo ◽  
M. E. Ferreira ◽  
M. C. P. Cruz

The evaluation of phosphorus (P) transformations in soil after application of manure or mineral P can improve soil management and optimise P use by plants. The objectives of the present study were to assess organic and inorganic P forms in two soils treated with dairy manure and triple superphosphate and to establish relationships between soil P fraction levels and P availability. Soil organic and inorganic P fractions were quantified using a pot experiment with two soils, a typical Hapludox and an arenic Hapludult, with three types of fertiliser treatments applied (no fertiliser application, application of dairy manure, and application of triple superphosphate, by adding 100 mg P dm–3 in the form of fertiliser in the two latter treatments) and four incubation times (15, 45, 90, and 180 days). Inorganic P was fractionated into aluminium-bound, iron-bound, occluded, and calcium-bound P. Organic P was extracted sequentially using sodium bicarbonate, hydrochloric acid, microbial biomass, sodium hydroxide, and residual organic P. After incubation, maize plants were cropped to quantify dry matter yield and absorbed P. Application of dairy manure resulted in a significant increase in most of the organic P fractions, and application of triple superphosphate led to a significant increase in inorganic P fractions. Both fertilisers raised labile organic P fractions in the two soils. The major sinks of P in Hapludox were occluded and fulvic acid-associated P. In contrast, the major sink of P in Hapludult was iron-bound P. The available P levels were stable after application of dairy manure, and decreased with time when fertilised with triple superphosphate. In the Hapludox, the organic P fractions had a significant positive correlation with P uptake by plants. The results suggest that organic P mineralisation plays a more significant role in plant P uptake in the Hapludox soil and inorganic P forms are the main contributors to plant P uptake in the Hapludult soil.


1983 ◽  
Vol 34 (2) ◽  
pp. 109 ◽  
Author(s):  
A Pinkerton ◽  
JR Simpson

The effects of differing levels of soil acidity and phosphorus (P) deficiency on root growth and P absorption by Stylosanthes hurnilis and Desmodiurn intorturn were studied in columns of an acutely P-deficient soil. Four rates of P were supplied in layers located 15-45 cm (dilute) or 20-25 cm (concentrated) below the soil surface. Calcium carbonate was added to some columns to raise the pH of the subsoil from 5.4 to 5.9 (in water). Yield and P uptake by D. intorturn without lime was always lower than yield and uptake by S. humilis, and there was little response to lime by either species at low P rates. At the highest P rate, however, there was a large interaction between lime and P placement for D. intortum. S. humilis produced finer roots and had a greater root density than D. intorturn in the fertilized layer; it also responded in root fineness to concentrated P and to lime. D. intortum did not respond in root fineness, but the highest rate of concentrated P with lime stimulated P absorption and transport as well as shoot growth. Efficiency of P uptake (i.e. per unit length of root) did not account for the differences between species. The success of S. hurnilis was due to its ability to exploit acidic soil layers under conditions of low P supply by forming dense masses of fine roots, rather than to an innate highly efficient P uptake.


2008 ◽  
Vol 133 (4) ◽  
pp. 515-520 ◽  
Author(s):  
Matthew D. Taylor ◽  
Paul V. Nelson ◽  
Jonathan M. Frantz

Sudden pH decline (SPD) describes the situation where crops growing at an appropriate pH rapidly (within 1–2 weeks) cause the substrate pH to shift downward one to two units. ‘Designer Dark Red’ geraniums (Pelargonium ×hortorum Bailey) were grown in three experiments to assess possible effects of light on SPD and phosphorous (P) uptake. The first experiment tested the effect of four light intensities (105, 210, 575, and 1020 ± 25 μmol·m−2·s−1) on substrate acidification. At 63 days, substrate pH declined from 6.0 to 4.8 as light intensity increased. Tissue P of plants grown at the highest two light levels was extremely low (0.10%–0.14% of dry weight). P stress has been reported to cause acidification. Because plants in the two lowest light treatments had adequate P, it was not possible to determine if the drop in substrate pH was a direct light effect or a combination of light and P. The second experiment used a factorial combination of the three highest light levels from Expt. 1 and five preplant P rates (0, 0.065, 0.13, 0.26, or 0.52 g·L−1 substrate) to assess this question. When tissue P concentrations were deficient, pH decreased by 0.6 to 1.0 pH units within 2 weeks and deficiency occurred more often with high light intensity. These data indicated that P deficiency caused substrate acidification and indicated the possibility that P uptake was suppressed by high light intensity. The third experiment was conducted in hydroponics to determine the direct effect of high light intensity on P uptake. In this experiment, cumulative P uptake per gram root and the rate of P uptake per gram root per day both decreased 20% when light intensity increased from 500 to 1100 μmol·m−2·s−1. It is clear from this study that P deficiency causes geraniums to acidify the substrate and that high light suppresses P uptake.


2021 ◽  
Vol 232 ◽  
pp. 03012
Author(s):  
B.N. Fitriatin ◽  
V.F. Dewi ◽  
A. Yuniarti

Dry land in Indonesia is dominated by marginal soil which have low macro nutrient content, low organic matter content and low soil microbial activity. Improving soil quality it is necessary to increase nutrients availability such as biofertilizers application. Biofertilizers contains beneficial microbial inoculants to increase soil nutrient availability. The use of biofertilizers combined with NPK fertilizer will increase macro nutrients availability and optimize plant growth, thus will increase fertilizers efficiency. This experiment was carried out to study the impact of biofertilizers on available-P, plant P-uptake and yield of upland rice at Land Research of Agriculture Faculty, Universitas Padjadjaran. This experiment used a randomized block design consisting of ten treatments and three replications The treatments consisted with two doses of biofertilizers (50 kg ha-1 and 75 kg ha-1) and three doses of N,P,K fertilizers (100%, 75%, and 50% from recommended doses). Biofertilizers contains N-fixing bacteria and phosphate solubilizing microbes. The result of experiment showed that application of biofertilizers 75 kg ha-1 and biofertilizers 50 kg ha-1 + N, P, K 50% increased soil phosphorus availability. The application of biofertilizers increased P-uptake up to 81%. Futhermore, biofertilizers 75 kg ha-1 + N, P, K 75% increased the yield of upland rice by 164%.


Agronomy ◽  
2020 ◽  
Vol 10 (12) ◽  
pp. 1941
Author(s):  
Iria Regueiro ◽  
Peter Siebert ◽  
Jingna Liu ◽  
Dorette Müller-Stöver ◽  
Lars Stoumann Jensen

There is an urgent need for better management practices regarding livestock farm nutrient imbalances and for finding alternatives to the actual use of mineral fertilizers. Acidification of animal manure is a mitigation practice used to reduce ammonia emissions to the atmospheric environment during manure storage and land application. Acidification modifies manure physicochemical characteristics, among which soluble N and P significantly increase. The main objective of this study was to investigate if acidification and the addition of a nitrification inhibitor to manure and placement of the treated manure close to the seed can stimulate maize growth by enhancing nutrient availability, specially P and consequently plant P uptake, at early development stages without the use of mineral N and P as a starter fertilizer. Raw dairy slurry and solid fractions from dairy slurry and digestate from a biogas plant were acidified to pH 5.5 and applied with or without a nitrification inhibitor (DMPP, 3,4-dimethyl pyrazole phosphate) to maize in a pot experiment, where biomass productivity, nutrient uptake and soil P availability were examined. Acidification increased the water-extractable P fraction of all slurry and digestate organic residues (by 20–61% of total P) and consequently plant P uptake from solid fractions of both slurry and digestate compared to the untreated products (by 47–49%). However, higher plant biomass from acidification alone was only achieved for the slurry solid fraction, while the combination of acidification and DMPP also increased plant biomass in the digestate solids treatment (by 49%). We therefore conclude that the combination of acidification and a nitrification inhibitor can increase the starter fertilizer value of slurry and digestate products sufficiently to make them suitable as a maize starter fertilizer.


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